; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI07G12100 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G12100
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description40S ribosomal protein S4
Genome locationChr7:10351202..10357475
RNA-Seq ExpressionCSPI07G12100
SyntenyCSPI07G12100
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000876 - Ribosomal protein S4e
IPR002942 - RNA-binding S4 domain
IPR005824 - KOW
IPR013843 - Ribosomal protein S4e, N-terminal
IPR013845 - Ribosomal protein S4e, central region
IPR014722 - Ribosomal protein L2, domain 2
IPR018199 - Ribosomal protein S4e, N-terminal, conserved site
IPR032277 - 40S ribosomal protein S4, C-terminal domain
IPR036986 - RNA-binding S4 domain superfamily
IPR038237 - Ribosomal protein S4e, central domain superfamily
IPR041982 - Ribosomal protein S4, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061270.1 40S ribosomal protein S4-3-like [Cucumis melo var. makuwa]6.8e-14799.62Show/hide
Query:  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRL
        ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRL
Subjt:  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRL

Query:  LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH
        LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH
Subjt:  LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH

Query:  KGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA
        KGSFETIHIQDATGHEFATRLGNVFT+GKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA
Subjt:  KGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA

XP_004150397.1 40S ribosomal protein S4-3 [Cucumis sativus]1.8e-147100Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFR

Query:  LLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA
        HKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA
Subjt:  HKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA

XP_008461463.1 PREDICTED: 40S ribosomal protein S4-3-like [Cucumis melo]5.2e-14799.24Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFR

Query:  LLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA
        HKGSFETIHIQDATGHEFATRLGNVFT+GKGTKPWVS+PKGKGIKLSIIEEARKRLASQAAVTA
Subjt:  HKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA

XP_038899765.1 40S ribosomal protein S4-3-like [Benincasa hispida]1.2e-14698.86Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKT+ENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFR

Query:  LLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA
        HKGSFETIHIQDATGHEFATRLGNVFT+GKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA
Subjt:  HKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA

XP_038900121.1 40S ribosomal protein S4-3 [Benincasa hispida]5.2e-14799.24Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKT+ENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFR

Query:  LLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA
        HKGSFETIHIQDATGHEFATRLGNVFT+GKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA
Subjt:  HKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA

TrEMBL top hitse value%identityAlignment
A0A0A0K4K7 40S ribosomal protein S48.6e-148100Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFR

Query:  LLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA
        HKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA
Subjt:  HKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA

A0A1S3CEH5 40S ribosomal protein S42.5e-14799.24Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFR

Query:  LLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA
        HKGSFETIHIQDATGHEFATRLGNVFT+GKGTKPWVS+PKGKGIKLSIIEEARKRLASQAAVTA
Subjt:  HKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA

A0A5A7UAW2 40S ribosomal protein S42.1e-14698.11Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMD++SIPKT+ENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFR

Query:  LLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNT+DGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA
        HKGSFETIHIQDATGHEFATRLGNVFT+GKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA
Subjt:  HKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA

A0A5A7V1R9 40S ribosomal protein S43.3e-14799.62Show/hide
Query:  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRL
        ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRL
Subjt:  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRL

Query:  LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH
        LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH
Subjt:  LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH

Query:  KGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA
        KGSFETIHIQDATGHEFATRLGNVFT+GKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA
Subjt:  KGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA

A0A6J1BSY6 40S ribosomal protein S41.2e-14698.48Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKT+PAGFMDVVSIPKT+ENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFR

Query:  LLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA
        HKGSFETIHIQDATGHEFATRLGNVFT+GKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA
Subjt:  HKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA

SwissProt top hitse value%identityAlignment
P46299 40S ribosomal protein S41.1e-13992.34Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFR
        MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHV+VDGKVRTDKT+PAGFMDVVSIPKT+E+FR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFR

Query:  LLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRF LH++  +E K+KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKI DFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAA
        HKGSFETIH+QDA GHEFATRLGNVFT+GKGTKPWVSLPK KGIKLSIIEEARKRLA+Q A
Subjt:  HKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAA

P46300 40S ribosomal protein S48.9e-14291.67Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL++I+RNRLKYALTYREVI+ILMQR V+VDGKVRTDKT+PAGFMDVVSIPKT+ENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFR

Query:  LLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHS+RDEE+K+KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKI DFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA
        HKGSFET+HIQD+ GHEFATRLGNVFT+GKGTKPWVSLPKGKGIKL+IIE+ARKRLA+Q+A  A
Subjt:  HKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA

P49204 40S ribosomal protein S4-25.2e-14292.34Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKT+ENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFR

Query:  LLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHS++DEEAK+KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAA
        HKGSFETIHIQD+TGHEFATRLGNV+T+GKGTKPWVSLPKGKGIKL+IIEEARKRLASQ A
Subjt:  HKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAA

Q8VYK6 40S ribosomal protein S4-34.0e-14292.34Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKT+ENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFR

Query:  LLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHS++DEEAK+KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE+NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAA
        HKGSFETIHIQD+TGHEFATRLGNV+T+GKGTKPWVSLPKGKGIKL+IIEEARKRLASQ A
Subjt:  HKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAA

Q93VH9 40S ribosomal protein S4-12.6e-14191.57Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKT+ENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFR

Query:  LLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHS++DEEAK+KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAA
        HKGSFETIHIQD+TGHEFATRLGNV+T+GKGTKPWVSLPKGKGIKL+IIEEARKRL++Q A
Subjt:  HKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAA

Arabidopsis top hitse value%identityAlignment
AT2G17360.1 Ribosomal protein S4 (RPS4A) family protein1.8e-14291.57Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKT+ENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFR

Query:  LLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHS++DEEAK+KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAA
        HKGSFETIHIQD+TGHEFATRLGNV+T+GKGTKPWVSLPKGKGIKL+IIEEARKRL++Q A
Subjt:  HKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAA

AT2G17360.2 Ribosomal protein S4 (RPS4A) family protein4.4e-9690.61Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKT+ENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFR

Query:  LLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVV
        LLYDTKGRFRLHS++DEEAK+KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVG  V
Subjt:  LLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVV

AT5G07090.1 Ribosomal protein S4 (RPS4A) family protein3.7e-14392.34Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKT+ENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFR

Query:  LLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHS++DEEAK+KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAA
        HKGSFETIHIQD+TGHEFATRLGNV+T+GKGTKPWVSLPKGKGIKL+IIEEARKRLASQ A
Subjt:  HKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAA

AT5G07090.2 Ribosomal protein S4 (RPS4A) family protein1.5e-13191.77Show/hide
Query:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEE
        MLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKT+ENFRLLYDTKGRFRLHS++DEE
Subjt:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEE

Query:  AKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF
        AK+KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEF
Subjt:  AKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF

Query:  ATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAA
        ATRLGNV+T+GKGTKPWVSLPKGKGIKL+IIEEARKRLASQ A
Subjt:  ATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAA

AT5G58420.1 Ribosomal protein S4 (RPS4A) family protein2.8e-14392.34Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKT+ENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFR

Query:  LLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHS++DEEAK+KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE+NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAA
        HKGSFETIHIQD+TGHEFATRLGNV+T+GKGTKPWVSLPKGKGIKL+IIEEARKRLASQ A
Subjt:  HKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGGGGACTGAAGAAGCATTTAAAGAGGCTCAATGCTCCGAAGCATTGGATGCTTGACAAGCTTGGTGGTGCATTTGCCCCCAAACCTTCATCTGGACCTCACAA
GTCGAGGGAATGCCTCCCTTTGATCCTTATATTGAGAAACCGACTCAAATATGCCCTCACGTACCGTGAGGTAATTGCAATATTAATGCAACGACATGTTTTGGTCGATG
GGAAGGTTAGGACAGACAAGACTTTCCCTGCTGGTTTCATGGACGTTGTGTCAATTCCCAAAACAAGTGAGAATTTCCGGCTTCTTTATGACACAAAAGGCCGATTTCGT
TTACACTCAGTTAGGGATGAGGAGGCCAAGTATAAGCTGTGCAAAGTTCGCTCTGTACAGTTTGGGCAAAAGGGCATCCCTTATCTGAACACCTACGATGGACGCACAAT
CCGTTATCCTGACCCTTTAATCAAGGCGAATGACACCATCAAGCTGGACCTCGAGTCCAACAAGATTGCAGATTTCATCAAGTTCGATGTAGGAAATGTTGTGATGGTTA
CCGGTGGAAGAAACAGAGGCAGGGTTGGAGTGATAAAGAATAGGGAGAAGCATAAGGGAAGCTTTGAAACAATCCACATTCAGGATGCAACTGGGCACGAATTTGCTACT
CGGCTGGGCAATGTGTTCACAGTTGGCAAGGGGACTAAGCCGTGGGTGTCCCTACCTAAGGGCAAGGGTATTAAATTATCCATCATCGAAGAAGCCAGGAAGAGGCTGGC
AAGCCAAGCCGCAGTTACTGCTTGA
mRNA sequenceShow/hide mRNA sequence
TTGAAGGCACGTGCTCGACAATTACTTAAATACAAAATTCCTCTTCTCCTTTTCGTCTCTGAGAGAACCCTAGCATCTTCCACAAACGCCACGCCGCTGCTTCCTCCCCA
CAGCTGCCGACTCTAGTTTAGCTCCGAAATATGGCAAGGGGACTGAAGAAGCATTTAAAGAGGCTCAATGCTCCGAAGCATTGGATGCTTGACAAGCTTGGTGGTGCATT
TGCCCCCAAACCTTCATCTGGACCTCACAAGTCGAGGGAATGCCTCCCTTTGATCCTTATATTGAGAAACCGACTCAAATATGCCCTCACGTACCGTGAGGTAATTGCAA
TATTAATGCAACGACATGTTTTGGTCGATGGGAAGGTTAGGACAGACAAGACTTTCCCTGCTGGTTTCATGGACGTTGTGTCAATTCCCAAAACAAGTGAGAATTTCCGG
CTTCTTTATGACACAAAAGGCCGATTTCGTTTACACTCAGTTAGGGATGAGGAGGCCAAGTATAAGCTGTGCAAAGTTCGCTCTGTACAGTTTGGGCAAAAGGGCATCCC
TTATCTGAACACCTACGATGGACGCACAATCCGTTATCCTGACCCTTTAATCAAGGCGAATGACACCATCAAGCTGGACCTCGAGTCCAACAAGATTGCAGATTTCATCA
AGTTCGATGTAGGAAATGTTGTGATGGTTACCGGTGGAAGAAACAGAGGCAGGGTTGGAGTGATAAAGAATAGGGAGAAGCATAAGGGAAGCTTTGAAACAATCCACATT
CAGGATGCAACTGGGCACGAATTTGCTACTCGGCTGGGCAATGTGTTCACAGTTGGCAAGGGGACTAAGCCGTGGGTGTCCCTACCTAAGGGCAAGGGTATTAAATTATC
CATCATCGAAGAAGCCAGGAAGAGGCTGGCAAGCCAAGCCGCAGTTACTGCTTGAGATTTAGTGTAGTGTAGTCATTGATGAAAGGTGGGATTTTGCTCTTGTTAGTTTT
GTTTTTCTTGGTTTTTTTTTTGGTTAAGTAGATCTAAAAAAGGTTGATACTTTGTTATTTCTACTACAATTATGCAAGGCTACTGCTACTGCTACAATCTTTGTCATTCC
AGAACTATTTGCTATAATGAACA
Protein sequenceShow/hide protein sequence
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFR
LHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFAT
RLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA