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CSPI07G12220 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G12220
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRibonuclease P
Genome locationChr7:10486250..10489264
RNA-Seq ExpressionCSPI07G12220
SyntenyCSPI07G12220
Gene Ontology termsGO:0001682 - tRNA 5'-leader removal (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0030677 - ribonuclease P complex (cellular component)
GO:0004526 - ribonuclease P activity (molecular function)
GO:0033204 - ribonuclease P RNA binding (molecular function)
InterPro domainsIPR002759 - RNase P subunit Pop5/Rpp14/Rnp2-like
IPR038085 - RNase P subunit Pop5/Rpp14/Rnp2-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061295.1 putative ribonuclease P/MRP protein subunit POP5 [Cucumis melo var. makuwa]2.1e-7996.1Show/hide
Query:  MVRFKNRYMVFEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKVCIIRASREDYQNVWAAITMVRSISNCPVVFN
        MVRFKNRYMVFEVLLDPNK+LKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITK+CIIRASREDYQNVWAAITMVRSISNCPVVFN
Subjt:  MVRFKNRYMVFEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKVCIIRASREDYQNVWAAITMVRSISNCPVVFN

Query:  LLDLSGNTRACKNTALRLEGLKFEQYKLMVGHCLPDNVNLQMQNCLEKIATLEN
        LLDLSGNTRACKNTALRL+GLKFEQYKLMVGHCLPDNV +QMQNCLEKIA LEN
Subjt:  LLDLSGNTRACKNTALRLEGLKFEQYKLMVGHCLPDNVNLQMQNCLEKIATLEN

XP_004139703.1 probable ribonuclease P/MRP protein subunit POP5 [Cucumis sativus]6.4e-8199.35Show/hide
Query:  MVRFKNRYMVFEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKVCIIRASREDYQNVWAAITMVRSISNCPVVFN
        MVRFKNRYMVFEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKVCIIRASREDYQNVWAAITMVRSISNCPVVFN
Subjt:  MVRFKNRYMVFEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKVCIIRASREDYQNVWAAITMVRSISNCPVVFN

Query:  LLDLSGNTRACKNTALRLEGLKFEQYKLMVGHCLPDNVNLQMQNCLEKIATLEN
        LLDLSGNTRACKNTALRLEGLKFEQYKLMVGH LPDNVNLQMQNCLEKIATLEN
Subjt:  LLDLSGNTRACKNTALRLEGLKFEQYKLMVGHCLPDNVNLQMQNCLEKIATLEN

XP_008461474.1 PREDICTED: probable ribonuclease P/MRP protein subunit POP5 [Cucumis melo]7.9e-7995.45Show/hide
Query:  MVRFKNRYMVFEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKVCIIRASREDYQNVWAAITMVRSISNCPVVFN
        MVRFKNRYMVFEVLLDPNK+LKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITK+CIIRASREDYQNVWAAITMVRSISNCPVVFN
Subjt:  MVRFKNRYMVFEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKVCIIRASREDYQNVWAAITMVRSISNCPVVFN

Query:  LLDLSGNTRACKNTALRLEGLKFEQYKLMVGHCLPDNVNLQMQNCLEKIATLEN
        LLDLSGNTRACKNTALRL+GLKFEQYKLMVGHCLPDNV + MQNCLEKIA LEN
Subjt:  LLDLSGNTRACKNTALRLEGLKFEQYKLMVGHCLPDNVNLQMQNCLEKIATLEN

XP_022972913.1 probable ribonuclease P/MRP protein subunit POP5 [Cucurbita maxima]2.7e-7187.66Show/hide
Query:  MVRFKNRYMVFEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKVCIIRASREDYQNVWAAITMVRSISNCPVVFN
        MV FKNRY+VFEV+LDPNKD+ TDDPIIITQYNVSKAIKDSILLNFGECGFAS+LGSFQVKYVNPITK+CIIRASREDYQNVWAAITMVRSISNCPVVFN
Subjt:  MVRFKNRYMVFEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKVCIIRASREDYQNVWAAITMVRSISNCPVVFN

Query:  LLDLSGNTRACKNTALRLEGLKFEQYKLMVGHCLPDNVNLQMQNCLEKIATLEN
        LLDL+GN+RACKNTALR++ LKFEQYKLMVG  + D VNLQMQNCLEKI TL+N
Subjt:  LLDLSGNTRACKNTALRLEGLKFEQYKLMVGHCLPDNVNLQMQNCLEKIATLEN

XP_038899949.1 probable ribonuclease P/MRP protein subunit POP5 [Benincasa hispida]3.3e-7794.81Show/hide
Query:  MVRFKNRYMVFEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKVCIIRASREDYQNVWAAITMVRSISNCPVVFN
        MVRFKNRYMV EVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFAS+LGSFQVKYVNPITK+CIIRASREDYQNVWAAITMVR+ISNCPVVFN
Subjt:  MVRFKNRYMVFEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKVCIIRASREDYQNVWAAITMVRSISNCPVVFN

Query:  LLDLSGNTRACKNTALRLEGLKFEQYKLMVGHCLPDNVNLQMQNCLEKIATLEN
        LLDLSGNTRACKNTALRL+ LKFEQYKLMVGH LPDNVNLQMQNCLEKIATLE+
Subjt:  LLDLSGNTRACKNTALRLEGLKFEQYKLMVGHCLPDNVNLQMQNCLEKIATLEN

TrEMBL top hitse value%identityAlignment
A0A0A0K7W3 Ribonuclease P5.0e-7199.27Show/hide
Query:  MVRFKNRYMVFEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKVCIIRASREDYQNVWAAITMVRSISNCPVVFN
        MVRFKNRYMVFEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKVCIIRASREDYQNVWAAITMVRSISNCPVVFN
Subjt:  MVRFKNRYMVFEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKVCIIRASREDYQNVWAAITMVRSISNCPVVFN

Query:  LLDLSGNTRACKNTALRLEGLKFEQYKLMVGHCLPDN
        LLDLSGNTRACKNTALRLEGLKFEQYKLMVGH LPDN
Subjt:  LLDLSGNTRACKNTALRLEGLKFEQYKLMVGHCLPDN

A0A1S3CEI9 Ribonuclease P3.8e-7995.45Show/hide
Query:  MVRFKNRYMVFEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKVCIIRASREDYQNVWAAITMVRSISNCPVVFN
        MVRFKNRYMVFEVLLDPNK+LKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITK+CIIRASREDYQNVWAAITMVRSISNCPVVFN
Subjt:  MVRFKNRYMVFEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKVCIIRASREDYQNVWAAITMVRSISNCPVVFN

Query:  LLDLSGNTRACKNTALRLEGLKFEQYKLMVGHCLPDNVNLQMQNCLEKIATLEN
        LLDLSGNTRACKNTALRL+GLKFEQYKLMVGHCLPDNV + MQNCLEKIA LEN
Subjt:  LLDLSGNTRACKNTALRLEGLKFEQYKLMVGHCLPDNVNLQMQNCLEKIATLEN

A0A5D3CDD4 Ribonuclease P1.0e-7996.1Show/hide
Query:  MVRFKNRYMVFEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKVCIIRASREDYQNVWAAITMVRSISNCPVVFN
        MVRFKNRYMVFEVLLDPNK+LKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITK+CIIRASREDYQNVWAAITMVRSISNCPVVFN
Subjt:  MVRFKNRYMVFEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKVCIIRASREDYQNVWAAITMVRSISNCPVVFN

Query:  LLDLSGNTRACKNTALRLEGLKFEQYKLMVGHCLPDNVNLQMQNCLEKIATLEN
        LLDLSGNTRACKNTALRL+GLKFEQYKLMVGHCLPDNV +QMQNCLEKIA LEN
Subjt:  LLDLSGNTRACKNTALRLEGLKFEQYKLMVGHCLPDNVNLQMQNCLEKIATLEN

A0A6J1EVL4 Ribonuclease P3.8e-7187.01Show/hide
Query:  MVRFKNRYMVFEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKVCIIRASREDYQNVWAAITMVRSISNCPVVFN
        MV FKNRY+VFEV+LDPNKD+ TDDPIIITQYNVSKAIKDSILLNFGECGFAS+LGSFQV+YVNPITK+CIIRASREDYQNVWAAITMVRSISNCPVVFN
Subjt:  MVRFKNRYMVFEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKVCIIRASREDYQNVWAAITMVRSISNCPVVFN

Query:  LLDLSGNTRACKNTALRLEGLKFEQYKLMVGHCLPDNVNLQMQNCLEKIATLEN
        LLDL+GN+RACKNTALRL+ LKFEQYKLMVG  + D VNLQMQNCLEKI +L+N
Subjt:  LLDLSGNTRACKNTALRLEGLKFEQYKLMVGHCLPDNVNLQMQNCLEKIATLEN

A0A6J1IBH7 Ribonuclease P1.3e-7187.66Show/hide
Query:  MVRFKNRYMVFEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKVCIIRASREDYQNVWAAITMVRSISNCPVVFN
        MV FKNRY+VFEV+LDPNKD+ TDDPIIITQYNVSKAIKDSILLNFGECGFAS+LGSFQVKYVNPITK+CIIRASREDYQNVWAAITMVRSISNCPVVFN
Subjt:  MVRFKNRYMVFEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKVCIIRASREDYQNVWAAITMVRSISNCPVVFN

Query:  LLDLSGNTRACKNTALRLEGLKFEQYKLMVGHCLPDNVNLQMQNCLEKIATLEN
        LLDL+GN+RACKNTALR++ LKFEQYKLMVG  + D VNLQMQNCLEKI TL+N
Subjt:  LLDLSGNTRACKNTALRLEGLKFEQYKLMVGHCLPDNVNLQMQNCLEKIATLEN

SwissProt top hitse value%identityAlignment
Q1JQ92 Ribonuclease P/MRP protein subunit POP51.2e-1027.85Show/hide
Query:  MVRFKNRYMVFEVLL-DPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKVCIIRASREDYQNVWAAITMVRSISN----C
        MVRFK+RY++ EV+  DP   L  +D ++ T       ++D+I    G  G A+    F V+Y+N  T + ++R  +E Y+ VW+A+  + S+ N     
Subjt:  MVRFKNRYMVFEVLL-DPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKVCIIRASREDYQNVWAAITMVRSISN----C

Query:  PVVFNLLDLSGNTRACKNTALRLEGLKFEQYKLMVGHCLPDNVNLQMQNCLEKIATLE
        P   N L + G  R C+   ++       Q  +++ +C  +     +Q  + K   LE
Subjt:  PVVFNLLDLSGNTRACKNTALRLEGLKFEQYKLMVGHCLPDNVNLQMQNCLEKIATLE

Q54EP3 Probable ribonuclease P/MRP protein subunit POP51.7e-1230.16Show/hide
Query:  MVRFKNRYMVFEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKVCIIRASREDYQNVWAAITMVRSISNCPVVFN
        MVR KNRY++ EV+   N+         + Q+ +S  +K+ +    GE  + +   + ++ YVNP T + IIR S E Y+++W A+T++ S    P+ F 
Subjt:  MVRFKNRYMVFEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKVCIIRASREDYQNVWAAITMVRSISNCPVVFN

Query:  LLDLSGNTRACKNTALRLEGLKFEQY
        ++ + G+ R C+  A+++ G +   Y
Subjt:  LLDLSGNTRACKNTALRLEGLKFEQY

Q6AWV1 Probable ribonuclease P/MRP protein subunit POP51.3e-4761.94Show/hide
Query:  MVRFKNRYMVFEVLLDPNKDLKTD-DPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKVCIIRASREDYQNVWAAITMVRSISNCPVVF
        MV FKNRYM+ EV LDP+KDL  +  PII+TQ+N+SKAIKDSIL+NFGECG  S+LGSFQVKYVNPITK+CI+R+SRE+++ VW AIT+V+SI NCPV+ 
Subjt:  MVRFKNRYMVFEVLLDPNKDLKTD-DPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKVCIIRASREDYQNVWAAITMVRSISNCPVVF

Query:  NLLDLSGNTRACKNTALRLEGLKFEQYKLMVGHCLPDNVNLQMQNCLEKIATLEN
        NLLD+SG  RAC++TAL+ +  KFEQ        L +    QM   LEKI  LEN
Subjt:  NLLDLSGNTRACKNTALRLEGLKFEQYKLMVGHCLPDNVNLQMQNCLEKIATLEN

Q969H6 Ribonuclease P/MRP protein subunit POP51.9e-1127.85Show/hide
Query:  MVRFKNRYMVFEVLL-DPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKVCIIRASREDYQNVWAAITMVRSISN----C
        MVRFK+RY++ E++  DP   L  DD ++      S  ++D+I    G  G A+    F V+Y+N  T + ++R  +E YQ VW+A+  +  + N     
Subjt:  MVRFKNRYMVFEVLL-DPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKVCIIRASREDYQNVWAAITMVRSISN----C

Query:  PVVFNLLDLSGNTRACKNTALRLEGLKFEQYKLMVGHCLPDNVNLQMQNCLEKIATLE
        P  FN L + G  R C+   ++       Q  +++ +C  +     +Q  + +   LE
Subjt:  PVVFNLLDLSGNTRACKNTALRLEGLKFEQYKLMVGHCLPDNVNLQMQNCLEKIATLE

Q9UU90 Ribonuclease P/MRP protein subunit POP51.4e-1433.58Show/hide
Query:  MVRFKNRYMVFEVLLDPNKDLKTDDPII-----ITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKVCIIRASREDYQNVWAAITMVRSISNC
        MVRFK+RY++FEVL    K+   D P I     IT  ++SK I+  +  NFG+ G      S  VKY +P T   I+R SR+ ++  WAA+ ++R +   
Subjt:  MVRFKNRYMVFEVLLDPNKDLKTDDPII-----ITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKVCIIRASREDYQNVWAAITMVRSISNC

Query:  PVVFNLLDLSGNTRACKNTALRLEGLKFEQYKLM
        PV+  ++ +SG  +  +  A+     +     LM
Subjt:  PVVFNLLDLSGNTRACKNTALRLEGLKFEQYKLM

Arabidopsis top hitse value%identityAlignment
AT1G04635.1 ribonuclease P family protein / Rpp14 family protein9.1e-4961.94Show/hide
Query:  MVRFKNRYMVFEVLLDPNKDLKTD-DPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKVCIIRASREDYQNVWAAITMVRSISNCPVVF
        MV FKNRYM+ EV LDP+KDL  +  PII+TQ+N+SKAIKDSIL+NFGECG  S+LGSFQVKYVNPITK+CI+R+SRE+++ VW AIT+V+SI NCPV+ 
Subjt:  MVRFKNRYMVFEVLLDPNKDLKTD-DPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKVCIIRASREDYQNVWAAITMVRSISNCPVVF

Query:  NLLDLSGNTRACKNTALRLEGLKFEQYKLMVGHCLPDNVNLQMQNCLEKIATLEN
        NLLD+SG  RAC++TAL+ +  KFEQ        L +    QM   LEKI  LEN
Subjt:  NLLDLSGNTRACKNTALRLEGLKFEQYKLMVGHCLPDNVNLQMQNCLEKIATLEN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGGTTTAAAAACCGATACATGGTGTTTGAAGTTCTCTTGGATCCCAATAAAGACCTTAAAACAGATGATCCTATTATCATTACCCAATATAATGTTTCGAAAGC
AATCAAGGATAGTATTCTTCTCAACTTCGGGGAATGTGGTTTTGCTTCTGCTCTTGGATCTTTTCAAGTTAAGTATGTAAATCCAATCACGAAGGTATGTATTATTAGAG
CCTCCAGAGAGGACTACCAGAATGTCTGGGCTGCAATTACTATGGTGAGGAGTATCAGCAATTGCCCCGTTGTATTCAATCTACTGGACCTAAGTGGAAATACAAGGGCT
TGCAAGAACACCGCCTTGAGGCTCGAAGGATTGAAGTTTGAGCAATACAAACTTATGGTTGGACATTGTCTTCCAGATAATGTAAATCTGCAAATGCAGAACTGTCTCGA
GAAGATTGCAACTTTAGAAAACTGA
mRNA sequenceShow/hide mRNA sequence
AGAAAAACAACCCAAAAAAAGAACCTAATTTCATAACTTCTTCCCGCCGCCCCCTTTCTGTCTTTCTCGCCAGCGGCTACTCTGCAAACCCACAAGCAGGGCCGCTGACC
ATAGACTCCGTCGACCTGTCTTTGTGTATCACACCTGCGCCCTCTTGCTCAACCATCGACGGCGGTGGTTTGTTGTCGACAAAACCCACAGATATAGCTTGCGAAGCAGA
CCTGCTTCAGACGCTCTTGCCCAGACCTTCGCGATAACGTTTCTCTCCGTTTTCTACAAGTTTCAGCGCTGACCCACACCTCGATTGGTCCCAAATCAGTTTACCCTTAA
CGTTTAAGGTTCAAACCTGCATGTTCGATCGTTTTTTAACACCAACCAGCAAAAATCGGAATTTTTTCAGCATATTTCGTTACTGAAGTTAGAAGGTCAAAGCAATGGTG
AGGTTTAAAAACCGATACATGGTGTTTGAAGTTCTCTTGGATCCCAATAAAGACCTTAAAACAGATGATCCTATTATCATTACCCAATATAATGTTTCGAAAGCAATCAA
GGATAGTATTCTTCTCAACTTCGGGGAATGTGGTTTTGCTTCTGCTCTTGGATCTTTTCAAGTTAAGTATGTAAATCCAATCACGAAGGTATGTATTATTAGAGCCTCCA
GAGAGGACTACCAGAATGTCTGGGCTGCAATTACTATGGTGAGGAGTATCAGCAATTGCCCCGTTGTATTCAATCTACTGGACCTAAGTGGAAATACAAGGGCTTGCAAG
AACACCGCCTTGAGGCTCGAAGGATTGAAGTTTGAGCAATACAAACTTATGGTTGGACATTGTCTTCCAGATAATGTAAATCTGCAAATGCAGAACTGTCTCGAGAAGAT
TGCAACTTTAGAAAACTGATTGTATTGTTGCCATTTATATGAAATCCATTTCCAGATAATTTTGATTAGATAGTTTACTTGAATCCCACACATCTTTATTCCCCTTGCAC
TCCCTGCCCCTTTGTATTTATTTCATTTGATTTTATTGCAGTTTTTGACCGTTAGTTGTACGAGAGAAGTAGCTGAATGAGAGTTACATGATTGGTAGCTCAATGAGAGA
AGTAGCTCAAAGCAAAAATATTGAGTTGAGAGAACAGGAAAAATAGACTAACGTAATTTCTTTCTTACCTTACCAAAGAGATATTTATTATACA
Protein sequenceShow/hide protein sequence
MVRFKNRYMVFEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKVCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDLSGNTRA
CKNTALRLEGLKFEQYKLMVGHCLPDNVNLQMQNCLEKIATLEN