; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI07G12300 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G12300
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr7:10580099..10580461
RNA-Seq ExpressionCSPI07G12300
SyntenyCSPI07G12300
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN44435.1 hypothetical protein Csa_015535 [Cucumis sativus]1.3e-5791.74Show/hide
Query:  MGGNYRKTKVNLGGLSFQIKDFWEKWTCETSKSVKPY-LSFHNLERLARLVKMLVPPNGGNTMGRGRRVGEQRGVGGICYMEVPCYLRTSARAAPNKRPV
        M GNYRKT+VNLGGL FQIKDFWEKWTCETSKS++   LSFHNLERLARLVKMLVPPNGGNTMGRGRRVGEQR VGGICYME+PCYLRTSARAAPNKRPV
Subjt:  MGGNYRKTKVNLGGLSFQIKDFWEKWTCETSKSVKPY-LSFHNLERLARLVKMLVPPNGGNTMGRGRRVGEQRGVGGICYMEVPCYLRTSARAAPNKRPV

Query:  KDAFHRTTSAITDFLFHSFAL
        KDAFHRTTSAITDFLFHSFAL
Subjt:  KDAFHRTTSAITDFLFHSFAL
TrEMBL top hitse value%identityAlignment
A0A0A0K410 Uncharacterized protein6.5e-5891.74Show/hide
Query:  MGGNYRKTKVNLGGLSFQIKDFWEKWTCETSKSVKPY-LSFHNLERLARLVKMLVPPNGGNTMGRGRRVGEQRGVGGICYMEVPCYLRTSARAAPNKRPV
        M GNYRKT+VNLGGL FQIKDFWEKWTCETSKS++   LSFHNLERLARLVKMLVPPNGGNTMGRGRRVGEQR VGGICYME+PCYLRTSARAAPNKRPV
Subjt:  MGGNYRKTKVNLGGLSFQIKDFWEKWTCETSKSVKPY-LSFHNLERLARLVKMLVPPNGGNTMGRGRRVGEQRGVGGICYMEVPCYLRTSARAAPNKRPV

Query:  KDAFHRTTSAITDFLFHSFAL
        KDAFHRTTSAITDFLFHSFAL
Subjt:  KDAFHRTTSAITDFLFHSFAL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGGAAATTACCGAAAAACGAAGGTAAATTTAGGAGGGCTTAGTTTTCAAATCAAAGACTTTTGGGAGAAATGGACATGTGAAACGTCCAAATCCGTGAAACCATA
CCTATCCTTTCACAATTTGGAACGTCTTGCACGACTGGTGAAAATGTTGGTTCCACCGAACGGTGGCAACACCATGGGACGAGGAAGGCGAGTTGGAGAGCAGCGGGGTG
TTGGAGGGATCTGCTACATGGAAGTACCCTGCTACTTGAGAACCTCAGCGAGAGCGGCACCTAATAAAAGACCGGTGAAAGACGCTTTCCATCGGACGACGTCGGCTATC
ACGGATTTTCTTTTTCATTCTTTTGCTTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGGAAATTACCGAAAAACGAAGGTAAATTTAGGAGGGCTTAGTTTTCAAATCAAAGACTTTTGGGAGAAATGGACATGTGAAACGTCCAAATCCGTGAAACCATA
CCTATCCTTTCACAATTTGGAACGTCTTGCACGACTGGTGAAAATGTTGGTTCCACCGAACGGTGGCAACACCATGGGACGAGGAAGGCGAGTTGGAGAGCAGCGGGGTG
TTGGAGGGATCTGCTACATGGAAGTACCCTGCTACTTGAGAACCTCAGCGAGAGCGGCACCTAATAAAAGACCGGTGAAAGACGCTTTCCATCGGACGACGTCGGCTATC
ACGGATTTTCTTTTTCATTCTTTTGCTTTATAA
Protein sequenceShow/hide protein sequence
MGGNYRKTKVNLGGLSFQIKDFWEKWTCETSKSVKPYLSFHNLERLARLVKMLVPPNGGNTMGRGRRVGEQRGVGGICYMEVPCYLRTSARAAPNKRPVKDAFHRTTSAI
TDFLFHSFAL