| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0037745.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.1e-138 | 70.73 | Show/hide |
Query: FMKPPPGTSPPPS--CII-------------WSETGSTSL----YCSSS-------------------LCDDMIIIGDDPHAISDLQHYLGQHFEMKDLG
+MKPPPGTS PP C++ W T S+++ + SS DDMII G+DPHAISDLQHYLGQHFEMKDLG
Subjt: FMKPPPGTSPPPS--CII-------------WSETGSTSL----YCSSS-------------------LCDDMIIIGDDPHAISDLQHYLGQHFEMKDLG
Query: SLNYFLGLDVSRRLNGYLLSQAKYVSNLLAHSGITNSNTASTSLEIDPNVYLTPFDGVPLEDVSLYRQLVGSLIYLTVTRPDIAYVFHIVSQFMAAPRTI
SLNYFLGL+VSRR +GYLLSQAKY S+LLA SGIT+SNTAST L DPNV+LTP+DGVPLE+VSLYRQLVGSLIYLTVTRPDIAY HIVSQFMAAPRTI
Subjt: SLNYFLGLDVSRRLNGYLLSQAKYVSNLLAHSGITNSNTASTSLEIDPNVYLTPFDGVPLEDVSLYRQLVGSLIYLTVTRPDIAYVFHIVSQFMAAPRTI
Query: HFTVVLCILRYVKGTLGHGLQFSSQSSLVLSGYYDANWAGDP----------------LISWRSKKQSVVSRSNTESKYRDLVDATVEFLWLRWLLADMG
HFT VL ILRYVKGTLGHGLQFSSQSSLVLSGY DA+WAGDP LISWRSKKQSVVSRS+TES+YR L DAT E LWLRWLLADMG
Subjt: HFTVVLCILRYVKGTLGHGLQFSSQSSLVLSGYYDANWAGDP----------------LISWRSKKQSVVSRSNTESKYRDLVDATVEFLWLRWLLADMG
Query: SPQQGLTLLHCDNRSAIQIAHNDVFHERTKHIENDSHFVHRHLLNNTLLLRSVSTTEQPVDIFTKALPPNRFCQLLTKLKLTATLP
PQQG TLLHCDNRSAIQIAHNDVFHERTKHIEND HF+ HLL++TLLL+S+STTEQP DIFTKALP RF Q+ TKLKLTATLP
Subjt: SPQQGLTLLHCDNRSAIQIAHNDVFHERTKHIENDSHFVHRHLLNNTLLLRSVSTTEQPVDIFTKALPPNRFCQLLTKLKLTATLP
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| KAA0041601.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.1e-138 | 70.73 | Show/hide |
Query: FMKPPPGTSPPPS--CII-------------WSETGSTSL----YCSSS-------------------LCDDMIIIGDDPHAISDLQHYLGQHFEMKDLG
+MKPPPGTS PP C++ W T S+++ + SS DDMII G+DPHAISDLQHYLGQHFEMKDLG
Subjt: FMKPPPGTSPPPS--CII-------------WSETGSTSL----YCSSS-------------------LCDDMIIIGDDPHAISDLQHYLGQHFEMKDLG
Query: SLNYFLGLDVSRRLNGYLLSQAKYVSNLLAHSGITNSNTASTSLEIDPNVYLTPFDGVPLEDVSLYRQLVGSLIYLTVTRPDIAYVFHIVSQFMAAPRTI
SLNYFLGL+VSRR +GYLLSQAKY S+LLA SGIT+SNTAST L DPNV+LTP+DGVPLE+VSLYRQLVGSLIYLTVTRPDIAY HIVSQFMAAPRTI
Subjt: SLNYFLGLDVSRRLNGYLLSQAKYVSNLLAHSGITNSNTASTSLEIDPNVYLTPFDGVPLEDVSLYRQLVGSLIYLTVTRPDIAYVFHIVSQFMAAPRTI
Query: HFTVVLCILRYVKGTLGHGLQFSSQSSLVLSGYYDANWAGDP----------------LISWRSKKQSVVSRSNTESKYRDLVDATVEFLWLRWLLADMG
HFT VL ILRYVKGTLGHGLQFSSQSSLVLSGY DA+WAGDP LISWRSKKQSVVSRS+TES+YR L DAT E LWLRWLLADMG
Subjt: HFTVVLCILRYVKGTLGHGLQFSSQSSLVLSGYYDANWAGDP----------------LISWRSKKQSVVSRSNTESKYRDLVDATVEFLWLRWLLADMG
Query: SPQQGLTLLHCDNRSAIQIAHNDVFHERTKHIENDSHFVHRHLLNNTLLLRSVSTTEQPVDIFTKALPPNRFCQLLTKLKLTATLP
PQQG TLLHCDNRSAIQIAHNDVFHERTKHIEND HF+ HLL++TLLL+S+STTEQP DIFTKALP RF Q+ TKLKLTATLP
Subjt: SPQQGLTLLHCDNRSAIQIAHNDVFHERTKHIENDSHFVHRHLLNNTLLLRSVSTTEQPVDIFTKALPPNRFCQLLTKLKLTATLP
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| KAA0060225.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.6e-137 | 71.24 | Show/hide |
Query: FMKPPPGTSPPPS--CII-------------WSETGS---TSLYCSSSLCD--------------------DMIIIGDDPHAISDLQHYLGQHFEMKDLG
+MKPPPGTSPPP C++ W T S T L +SS D DMII G+DP AISDLQHYLGQHFEMKDLG
Subjt: FMKPPPGTSPPPS--CII-------------WSETGS---TSLYCSSSLCD--------------------DMIIIGDDPHAISDLQHYLGQHFEMKDLG
Query: SLNYFLGLDVSRRLNGYLLSQAKYVSNLLAHSGITNSNTASTSLEIDPNVYLTPFDGVPLEDVSLYRQLVGSLIYLTVTRPDIAYVFHIVSQFMAAPRTI
SLNYFLGL+VSRR NGYLLSQAKY S+LLA SGIT+SNTAST L DPNV+LTP+DGVPLEDVSLYRQLVGSLIYLTVTRPDIAY HIVSQFMAAPRTI
Subjt: SLNYFLGLDVSRRLNGYLLSQAKYVSNLLAHSGITNSNTASTSLEIDPNVYLTPFDGVPLEDVSLYRQLVGSLIYLTVTRPDIAYVFHIVSQFMAAPRTI
Query: HFTVVLCILRYVKGTLGHGLQFSSQSSLVLSGYYDANWAGDP----------------LISWRSKKQSVVSRSNTESKYRDLVDATVEFLWLRWLLADMG
HFT VL ILRYVKGTLGHGLQFSSQSSLVLSGY DA+WAGDP LISWRSKKQSVVSRS+TES+YR L DAT E LWLRWLLADMG
Subjt: HFTVVLCILRYVKGTLGHGLQFSSQSSLVLSGYYDANWAGDP----------------LISWRSKKQSVVSRSNTESKYRDLVDATVEFLWLRWLLADMG
Query: SPQQGLTLLHCDNRSAIQIAHNDVFHERTKHIENDSHFVHRHLLNNTLLLRSVSTTEQPVDIFTKALPPNRFCQLLTKLKLTATLP
PQQG TLLHCDNRSAIQIAHNDVFHERTKHIEND HF+ HLL++ LLL+ VSTTEQP DIFTKALP RF Q+ KLKLTATLP
Subjt: SPQQGLTLLHCDNRSAIQIAHNDVFHERTKHIENDSHFVHRHLLNNTLLLRSVSTTEQPVDIFTKALPPNRFCQLLTKLKLTATLP
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| TYK04714.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 3.3e-138 | 70.47 | Show/hide |
Query: FMKPPPGTSPPPS--CII-------------WSETGSTSL----YCSSS-------------------LCDDMIIIGDDPHAISDLQHYLGQHFEMKDLG
+MKPPPGTS PP C++ W T S+++ + SS DDMII G+DPHAISDLQHYLGQHFEMKDLG
Subjt: FMKPPPGTSPPPS--CII-------------WSETGSTSL----YCSSS-------------------LCDDMIIIGDDPHAISDLQHYLGQHFEMKDLG
Query: SLNYFLGLDVSRRLNGYLLSQAKYVSNLLAHSGITNSNTASTSLEIDPNVYLTPFDGVPLEDVSLYRQLVGSLIYLTVTRPDIAYVFHIVSQFMAAPRTI
SLNYFLGL+VSRR +GYLLSQAKY S+LLA SGIT+SNTAST L DPNV+LTP+DGVPLE+VSLYRQLVGSLIYLTVTRPDIAY HIVSQFMAAPRTI
Subjt: SLNYFLGLDVSRRLNGYLLSQAKYVSNLLAHSGITNSNTASTSLEIDPNVYLTPFDGVPLEDVSLYRQLVGSLIYLTVTRPDIAYVFHIVSQFMAAPRTI
Query: HFTVVLCILRYVKGTLGHGLQFSSQSSLVLSGYYDANWAGDP----------------LISWRSKKQSVVSRSNTESKYRDLVDATVEFLWLRWLLADMG
HFT VL ILRYVKGTLGHGLQFSSQSSLVLSGY DA+WAGDP LISWRSKKQSVVSRS+TES+YR L DAT E LWLRWLLADMG
Subjt: HFTVVLCILRYVKGTLGHGLQFSSQSSLVLSGYYDANWAGDP----------------LISWRSKKQSVVSRSNTESKYRDLVDATVEFLWLRWLLADMG
Query: SPQQGLTLLHCDNRSAIQIAHNDVFHERTKHIENDSHFVHRHLLNNTLLLRSVSTTEQPVDIFTKALPPNRFCQLLTKLKLTATLP
PQQG TLLHCDNRSAIQIAHNDVFHERTKHIEND HF+ HLL++TLLL+S+STTEQP DIFTKALP RF Q+ TKLKLTA+LP
Subjt: SPQQGLTLLHCDNRSAIQIAHNDVFHERTKHIENDSHFVHRHLLNNTLLLRSVSTTEQPVDIFTKALPPNRFCQLLTKLKLTATLP
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| TYK10332.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 5.1e-139 | 75.35 | Show/hide |
Query: PFLKKFMKPPPGTSPPPSCIIWSETGSTSLYCSSSLCDDMIIIGDDPHAISDLQHYLGQHFEMKDLGSLNYFLGLDVSRRLNGYLLSQAKYVSNLLAHSG
P + +MKPPPGTS PP + DDMII G+DP AISDLQHYLGQHFEM+DLGSLNYFLGL+VSRR +GYLLSQAKY S+LLA SG
Subjt: PFLKKFMKPPPGTSPPPSCIIWSETGSTSLYCSSSLCDDMIIIGDDPHAISDLQHYLGQHFEMKDLGSLNYFLGLDVSRRLNGYLLSQAKYVSNLLAHSG
Query: ITNSNTASTSLEIDPNVYLTPFDGVPLEDVSLYRQLVGSLIYLTVTRPDIAYVFHIVSQFMAAPRTIHFTVVLCILRYVKGTLGHGLQFSSQSSLVLSGY
IT+SNTAST L DPNV+LTP+DGVPLE+VSLYRQLVGSLIYLTVT PDIAYV HIVSQFMAAPRTIHFTVVL ILRYVKGTLGHGLQFSSQSSLVLSGY
Subjt: ITNSNTASTSLEIDPNVYLTPFDGVPLEDVSLYRQLVGSLIYLTVTRPDIAYVFHIVSQFMAAPRTIHFTVVLCILRYVKGTLGHGLQFSSQSSLVLSGY
Query: YDANWAGDP----------------LISWRSKKQSVVSRSNTESKYRDLVDATVEFLWLRWLLADMGSPQQGLTLLHCDNRSAIQIAHNDVFHERTKHIE
+DA+WAGDP LISWRSKKQSVVSRS+TES+YR L DAT E LWLRWLLADMG PQQG TLLHCDNRSAIQIAHNDVFHERTKHIE
Subjt: YDANWAGDP----------------LISWRSKKQSVVSRSNTESKYRDLVDATVEFLWLRWLLADMGSPQQGLTLLHCDNRSAIQIAHNDVFHERTKHIE
Query: NDSHFVHRHLLNNTLLLRSVSTTEQPVDIFTKALPPNRFCQLLTKLKLTATLP
ND HF+ HLL++TLLL+ VSTTEQP DIFTKALP RF Q+ TKL+LTATLP
Subjt: NDSHFVHRHLLNNTLLLRSVSTTEQPVDIFTKALPPNRFCQLLTKLKLTATLP
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T8F2 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.5e-139 | 70.73 | Show/hide |
Query: FMKPPPGTSPPPS--CII-------------WSETGSTSL----YCSSS-------------------LCDDMIIIGDDPHAISDLQHYLGQHFEMKDLG
+MKPPPGTS PP C++ W T S+++ + SS DDMII G+DPHAISDLQHYLGQHFEMKDLG
Subjt: FMKPPPGTSPPPS--CII-------------WSETGSTSL----YCSSS-------------------LCDDMIIIGDDPHAISDLQHYLGQHFEMKDLG
Query: SLNYFLGLDVSRRLNGYLLSQAKYVSNLLAHSGITNSNTASTSLEIDPNVYLTPFDGVPLEDVSLYRQLVGSLIYLTVTRPDIAYVFHIVSQFMAAPRTI
SLNYFLGL+VSRR +GYLLSQAKY S+LLA SGIT+SNTAST L DPNV+LTP+DGVPLE+VSLYRQLVGSLIYLTVTRPDIAY HIVSQFMAAPRTI
Subjt: SLNYFLGLDVSRRLNGYLLSQAKYVSNLLAHSGITNSNTASTSLEIDPNVYLTPFDGVPLEDVSLYRQLVGSLIYLTVTRPDIAYVFHIVSQFMAAPRTI
Query: HFTVVLCILRYVKGTLGHGLQFSSQSSLVLSGYYDANWAGDP----------------LISWRSKKQSVVSRSNTESKYRDLVDATVEFLWLRWLLADMG
HFT VL ILRYVKGTLGHGLQFSSQSSLVLSGY DA+WAGDP LISWRSKKQSVVSRS+TES+YR L DAT E LWLRWLLADMG
Subjt: HFTVVLCILRYVKGTLGHGLQFSSQSSLVLSGYYDANWAGDP----------------LISWRSKKQSVVSRSNTESKYRDLVDATVEFLWLRWLLADMG
Query: SPQQGLTLLHCDNRSAIQIAHNDVFHERTKHIENDSHFVHRHLLNNTLLLRSVSTTEQPVDIFTKALPPNRFCQLLTKLKLTATLP
PQQG TLLHCDNRSAIQIAHNDVFHERTKHIEND HF+ HLL++TLLL+S+STTEQP DIFTKALP RF Q+ TKLKLTATLP
Subjt: SPQQGLTLLHCDNRSAIQIAHNDVFHERTKHIENDSHFVHRHLLNNTLLLRSVSTTEQPVDIFTKALPPNRFCQLLTKLKLTATLP
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| A0A5A7V2X4 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 8.0e-138 | 71.24 | Show/hide |
Query: FMKPPPGTSPPPS--CII-------------WSETGS---TSLYCSSSLCD--------------------DMIIIGDDPHAISDLQHYLGQHFEMKDLG
+MKPPPGTSPPP C++ W T S T L +SS D DMII G+DP AISDLQHYLGQHFEMKDLG
Subjt: FMKPPPGTSPPPS--CII-------------WSETGS---TSLYCSSSLCD--------------------DMIIIGDDPHAISDLQHYLGQHFEMKDLG
Query: SLNYFLGLDVSRRLNGYLLSQAKYVSNLLAHSGITNSNTASTSLEIDPNVYLTPFDGVPLEDVSLYRQLVGSLIYLTVTRPDIAYVFHIVSQFMAAPRTI
SLNYFLGL+VSRR NGYLLSQAKY S+LLA SGIT+SNTAST L DPNV+LTP+DGVPLEDVSLYRQLVGSLIYLTVTRPDIAY HIVSQFMAAPRTI
Subjt: SLNYFLGLDVSRRLNGYLLSQAKYVSNLLAHSGITNSNTASTSLEIDPNVYLTPFDGVPLEDVSLYRQLVGSLIYLTVTRPDIAYVFHIVSQFMAAPRTI
Query: HFTVVLCILRYVKGTLGHGLQFSSQSSLVLSGYYDANWAGDP----------------LISWRSKKQSVVSRSNTESKYRDLVDATVEFLWLRWLLADMG
HFT VL ILRYVKGTLGHGLQFSSQSSLVLSGY DA+WAGDP LISWRSKKQSVVSRS+TES+YR L DAT E LWLRWLLADMG
Subjt: HFTVVLCILRYVKGTLGHGLQFSSQSSLVLSGYYDANWAGDP----------------LISWRSKKQSVVSRSNTESKYRDLVDATVEFLWLRWLLADMG
Query: SPQQGLTLLHCDNRSAIQIAHNDVFHERTKHIENDSHFVHRHLLNNTLLLRSVSTTEQPVDIFTKALPPNRFCQLLTKLKLTATLP
PQQG TLLHCDNRSAIQIAHNDVFHERTKHIEND HF+ HLL++ LLL+ VSTTEQP DIFTKALP RF Q+ KLKLTATLP
Subjt: SPQQGLTLLHCDNRSAIQIAHNDVFHERTKHIENDSHFVHRHLLNNTLLLRSVSTTEQPVDIFTKALPPNRFCQLLTKLKLTATLP
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| A0A5A7VIT8 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.5e-139 | 70.73 | Show/hide |
Query: FMKPPPGTSPPPS--CII-------------WSETGSTSL----YCSSS-------------------LCDDMIIIGDDPHAISDLQHYLGQHFEMKDLG
+MKPPPGTS PP C++ W T S+++ + SS DDMII G+DPHAISDLQHYLGQHFEMKDLG
Subjt: FMKPPPGTSPPPS--CII-------------WSETGSTSL----YCSSS-------------------LCDDMIIIGDDPHAISDLQHYLGQHFEMKDLG
Query: SLNYFLGLDVSRRLNGYLLSQAKYVSNLLAHSGITNSNTASTSLEIDPNVYLTPFDGVPLEDVSLYRQLVGSLIYLTVTRPDIAYVFHIVSQFMAAPRTI
SLNYFLGL+VSRR +GYLLSQAKY S+LLA SGIT+SNTAST L DPNV+LTP+DGVPLE+VSLYRQLVGSLIYLTVTRPDIAY HIVSQFMAAPRTI
Subjt: SLNYFLGLDVSRRLNGYLLSQAKYVSNLLAHSGITNSNTASTSLEIDPNVYLTPFDGVPLEDVSLYRQLVGSLIYLTVTRPDIAYVFHIVSQFMAAPRTI
Query: HFTVVLCILRYVKGTLGHGLQFSSQSSLVLSGYYDANWAGDP----------------LISWRSKKQSVVSRSNTESKYRDLVDATVEFLWLRWLLADMG
HFT VL ILRYVKGTLGHGLQFSSQSSLVLSGY DA+WAGDP LISWRSKKQSVVSRS+TES+YR L DAT E LWLRWLLADMG
Subjt: HFTVVLCILRYVKGTLGHGLQFSSQSSLVLSGYYDANWAGDP----------------LISWRSKKQSVVSRSNTESKYRDLVDATVEFLWLRWLLADMG
Query: SPQQGLTLLHCDNRSAIQIAHNDVFHERTKHIENDSHFVHRHLLNNTLLLRSVSTTEQPVDIFTKALPPNRFCQLLTKLKLTATLP
PQQG TLLHCDNRSAIQIAHNDVFHERTKHIEND HF+ HLL++TLLL+S+STTEQP DIFTKALP RF Q+ TKLKLTATLP
Subjt: SPQQGLTLLHCDNRSAIQIAHNDVFHERTKHIENDSHFVHRHLLNNTLLLRSVSTTEQPVDIFTKALPPNRFCQLLTKLKLTATLP
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| A0A5D3C0D7 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.6e-138 | 70.47 | Show/hide |
Query: FMKPPPGTSPPPS--CII-------------WSETGSTSL----YCSSS-------------------LCDDMIIIGDDPHAISDLQHYLGQHFEMKDLG
+MKPPPGTS PP C++ W T S+++ + SS DDMII G+DPHAISDLQHYLGQHFEMKDLG
Subjt: FMKPPPGTSPPPS--CII-------------WSETGSTSL----YCSSS-------------------LCDDMIIIGDDPHAISDLQHYLGQHFEMKDLG
Query: SLNYFLGLDVSRRLNGYLLSQAKYVSNLLAHSGITNSNTASTSLEIDPNVYLTPFDGVPLEDVSLYRQLVGSLIYLTVTRPDIAYVFHIVSQFMAAPRTI
SLNYFLGL+VSRR +GYLLSQAKY S+LLA SGIT+SNTAST L DPNV+LTP+DGVPLE+VSLYRQLVGSLIYLTVTRPDIAY HIVSQFMAAPRTI
Subjt: SLNYFLGLDVSRRLNGYLLSQAKYVSNLLAHSGITNSNTASTSLEIDPNVYLTPFDGVPLEDVSLYRQLVGSLIYLTVTRPDIAYVFHIVSQFMAAPRTI
Query: HFTVVLCILRYVKGTLGHGLQFSSQSSLVLSGYYDANWAGDP----------------LISWRSKKQSVVSRSNTESKYRDLVDATVEFLWLRWLLADMG
HFT VL ILRYVKGTLGHGLQFSSQSSLVLSGY DA+WAGDP LISWRSKKQSVVSRS+TES+YR L DAT E LWLRWLLADMG
Subjt: HFTVVLCILRYVKGTLGHGLQFSSQSSLVLSGYYDANWAGDP----------------LISWRSKKQSVVSRSNTESKYRDLVDATVEFLWLRWLLADMG
Query: SPQQGLTLLHCDNRSAIQIAHNDVFHERTKHIENDSHFVHRHLLNNTLLLRSVSTTEQPVDIFTKALPPNRFCQLLTKLKLTATLP
PQQG TLLHCDNRSAIQIAHNDVFHERTKHIEND HF+ HLL++TLLL+S+STTEQP DIFTKALP RF Q+ TKLKLTA+LP
Subjt: SPQQGLTLLHCDNRSAIQIAHNDVFHERTKHIENDSHFVHRHLLNNTLLLRSVSTTEQPVDIFTKALPPNRFCQLLTKLKLTATLP
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| A0A5D3CGF8 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.5e-139 | 75.35 | Show/hide |
Query: PFLKKFMKPPPGTSPPPSCIIWSETGSTSLYCSSSLCDDMIIIGDDPHAISDLQHYLGQHFEMKDLGSLNYFLGLDVSRRLNGYLLSQAKYVSNLLAHSG
P + +MKPPPGTS PP + DDMII G+DP AISDLQHYLGQHFEM+DLGSLNYFLGL+VSRR +GYLLSQAKY S+LLA SG
Subjt: PFLKKFMKPPPGTSPPPSCIIWSETGSTSLYCSSSLCDDMIIIGDDPHAISDLQHYLGQHFEMKDLGSLNYFLGLDVSRRLNGYLLSQAKYVSNLLAHSG
Query: ITNSNTASTSLEIDPNVYLTPFDGVPLEDVSLYRQLVGSLIYLTVTRPDIAYVFHIVSQFMAAPRTIHFTVVLCILRYVKGTLGHGLQFSSQSSLVLSGY
IT+SNTAST L DPNV+LTP+DGVPLE+VSLYRQLVGSLIYLTVT PDIAYV HIVSQFMAAPRTIHFTVVL ILRYVKGTLGHGLQFSSQSSLVLSGY
Subjt: ITNSNTASTSLEIDPNVYLTPFDGVPLEDVSLYRQLVGSLIYLTVTRPDIAYVFHIVSQFMAAPRTIHFTVVLCILRYVKGTLGHGLQFSSQSSLVLSGY
Query: YDANWAGDP----------------LISWRSKKQSVVSRSNTESKYRDLVDATVEFLWLRWLLADMGSPQQGLTLLHCDNRSAIQIAHNDVFHERTKHIE
+DA+WAGDP LISWRSKKQSVVSRS+TES+YR L DAT E LWLRWLLADMG PQQG TLLHCDNRSAIQIAHNDVFHERTKHIE
Subjt: YDANWAGDP----------------LISWRSKKQSVVSRSNTESKYRDLVDATVEFLWLRWLLADMGSPQQGLTLLHCDNRSAIQIAHNDVFHERTKHIE
Query: NDSHFVHRHLLNNTLLLRSVSTTEQPVDIFTKALPPNRFCQLLTKLKLTATLP
ND HF+ HLL++TLLL+ VSTTEQP DIFTKALP RF Q+ TKL+LTATLP
Subjt: NDSHFVHRHLLNNTLLLRSVSTTEQPVDIFTKALPPNRFCQLLTKLKLTATLP
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 9.0e-38 | 32.28 | Show/hide |
Query: DDMIIIGDDPHAISDLQHYLGQHFEMKDLGSLNYFLGLDVSRRLNGYLLSQAKYVSNLLAHSGITNSNTASTSLEIDPNVYLTPFDGVPLEDVSL-YRQL
DD++I D +++ + YL + F M DL + +F+G+ + + + LSQ+ YV +L+ + N N ST L N L D ED + R L
Subjt: DDMIIIGDDPHAISDLQHYLGQHFEMKDLGSLNYFLGLDVSRRLNGYLLSQAKYVSNLLAHSGITNSNTASTSLEIDPNVYLTPFDGVPLEDVSL-YRQL
Query: VGSLIYLTV-TRPDIAYVFHIVSQFMAAPRTIHFTVVLCILRYVKGTLGHGLQFSSQSSL--VLSGYYDANWAGDP-----------------LISWRSK
+G L+Y+ + TRPD+ +I+S++ + + + + +LRY+KGT+ L F + + GY D++WAG LI W +K
Subjt: VGSLIYLTV-TRPDIAYVFHIVSQFMAAPRTIHFTVVLCILRYVKGTLGHGLQFSSQSSL--VLSGYYDANWAGDP-----------------LISWRSK
Query: KQSVVSRSNTESKYRDLVDATVEFLWLRWLLADMGSPQQGLTLLHCDNRSAIQIAHNDVFHERTKHIENDSHFVHRHLLNNTLLLRSVSTTEQPVDIFTK
+Q+ V+ S+TE++Y L +A E LWL++LL + + ++ DN+ I IA+N H+R KHI+ HF + NN + L + T Q DIFTK
Subjt: KQSVVSRSNTESKYRDLVDATVEFLWLRWLLADMGSPQQGLTLLHCDNRSAIQIAHNDVFHERTKHIENDSHFVHRHLLNNTLLLRSVSTTEQPVDIFTK
Query: ALPPNRFCQLLTKLKL
LP RF +L KL L
Subjt: ALPPNRFCQLLTKLKL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.3e-39 | 32.93 | Show/hide |
Query: CIIWSETGSTSLYCSSSLCDDMIIIGDDPHAISDLQHYLGQHFEMKDLGSLNYFLGLDVSRRLNG--YLLSQAKYVSNLLAHSGITNSNTAST----SLE
C+ + + DDM+I+G D I+ L+ L + F+MKDLG LG+ + R LSQ KY+ +L + N+ ST L+
Subjt: CIIWSETGSTSLYCSSSLCDDMIIIGDDPHAISDLQHYLGQHFEMKDLGSLNYFLGLDVSRRLNG--YLLSQAKYVSNLLAHSGITNSNTAST----SLE
Query: IDPNVYLTPFDGVPLEDVSLYRQLVGSLIYLTV-TRPDIAYVFHIVSQFMAAPRTIHFTVVLCILRYVKGTLGHGLQFSSQSSLVLSGYYDANWAGD---
+ + T + Y VGSL+Y V TRPDIA+ +VS+F+ P H+ V ILRY++GT G L F S +L GY DA+ AGD
Subjt: IDPNVYLTPFDGVPLEDVSLYRQLVGSLIYLTV-TRPDIAYVFHIVSQFMAAPRTIHFTVVLCILRYVKGTLGHGLQFSSQSSLVLSGYYDANWAGD---
Query: -------------PLISWRSKKQSVVSRSNTESKYRDLVDATVEFLWLRWLLADMGSPQQGLTLLHCDNRSAIQIAHNDVFHERTKHIENDSHFVHRHLL
ISW+SK Q V+ S TE++Y + E +WL+ L ++G Q+ +++CD++SAI ++ N ++H RTKHI+ H++ +
Subjt: -------------PLISWRSKKQSVVSRSNTESKYRDLVDATVEFLWLRWLLADMGSPQQGLTLLHCDNRSAIQIAHNDVFHERTKHIENDSHFVHRHLL
Query: NNTLLLRSVSTTEQPVDIFTKALPPNRF
+ +L + +ST E P D+ TK +P N+F
Subjt: NNTLLLRSVSTTEQPVDIFTKALPPNRF
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| P92519 Uncharacterized mitochondrial protein AtMg00810 | 1.7e-31 | 36.2 | Show/hide |
Query: DDMIIIGDDPHAISDLQHYLGQHFEMKDLGSLNYFLGLDVSRRLNGYLLSQAKYVSNLLAHSGITNSNTASTSLEIDPNVYLTPFDGVPLEDVSLYRQLV
DD+++ G ++ L L F MKDLG ++YFLG+ + +G LSQ KY +L ++G+ + ST L + N + D S +R +V
Subjt: DDMIIIGDDPHAISDLQHYLGQHFEMKDLGSLNYFLGLDVSRRLNGYLLSQAKYVSNLLAHSGITNSNTASTSLEIDPNVYLTPFDGVPLEDVSLYRQLV
Query: GSLIYLTVTRPDIAYVFHIVSQFMAAPRTIHFTVVLCILRYVKGTLGHGLQFSSQSSLVLSGYYDANWAGDP----------------LISWRSKKQSVV
G+L YLT+TRPDI+Y +IV Q M P F ++ +LRYVKGT+ HGL S L + + D++WAG +ISW +K+Q V
Subjt: GSLIYLTVTRPDIAYVFHIVSQFMAAPRTIHFTVVLCILRYVKGTLGHGLQFSSQSSLVLSGYYDANWAGDP----------------LISWRSKKQSVV
Query: SRSNTESKYRDLVDATVEFLW
SRS+TE++YR L E W
Subjt: SRSNTESKYRDLVDATVEFLW
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.0e-49 | 36.59 | Show/hide |
Query: DDMIIIGDDPHAISDLQHYLGQHFEMKDLGSLNYFLGLDVSRRLNGYLLSQAKYVSNLLAHSGITNSNTASTSLEIDPNVYLTPFDGVPLEDVSLYRQLV
DD++I G+DP + + L Q F +KD L+YFLG++ R G LSQ +Y+ +LLA + + + +T + P + L + G L D + YR +V
Subjt: DDMIIIGDDPHAISDLQHYLGQHFEMKDLGSLNYFLGLDVSRRLNGYLLSQAKYVSNLLAHSGITNSNTASTSLEIDPNVYLTPFDGVPLEDVSLYRQLV
Query: GSLIYLTVTRPDIAYVFHIVSQFMAAPRTIHFTVVLCILRYVKGTLGHGLQFSSQSSLVLSGYYDANWAGDP----------------LISWRSKKQSVV
GSL YL TRPDI+Y + +SQFM P H + ILRY+ GT HG+ ++L L Y DA+WAGD ISW SKKQ V
Subjt: GSLIYLTVTRPDIAYVFHIVSQFMAAPRTIHFTVVLCILRYVKGTLGHGLQFSSQSSLVLSGYYDANWAGDP----------------LISWRSKKQSVV
Query: SRSNTESKYRDLVDATVEFLWLRWLLADMGSPQQGLTLLHCDNRSAIQIAHNDVFHERTKHIENDSHFVHRHLLNNTLLLRSVSTTEQPVDIFTKALPPN
RS+TE++YR + + + E W+ LL ++G +++CDN A + N VFH R KHI D HF+ + + L + VST +Q D TK L
Subjt: SRSNTESKYRDLVDATVEFLWLRWLLADMGSPQQGLTLLHCDNRSAIQIAHNDVFHERTKHIENDSHFVHRHLLNNTLLLRSVSTTEQPVDIFTKALPPN
Query: RFCQLLTKLKLTATLPS
F +K+ +T PS
Subjt: RFCQLLTKLKLTATLPS
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.2e-45 | 35.02 | Show/hide |
Query: DDMIIIGDDPHAISDLQHYLGQHFEMKDLGSLNYFLGLDVSRRLNGYLLSQAKYVSNLLAHSGITNSNTASTSLEIDPNVYLTPFDGVPLEDVSLYRQLV
DD++I G+D + L Q F +K+ L+YFLG++ R G LSQ +Y +LLA + + + +T + P LT G L D + YR +V
Subjt: DDMIIIGDDPHAISDLQHYLGQHFEMKDLGSLNYFLGLDVSRRLNGYLLSQAKYVSNLLAHSGITNSNTASTSLEIDPNVYLTPFDGVPLEDVSLYRQLV
Query: GSLIYLTVTRPDIAYVFHIVSQFMAAPRTIHFTVVLCILRYVKGTLGHGLQFSSQSSLVLSGYYDANWAGDP----------------LISWRSKKQSVV
GSL YL TRPD++Y + +SQ+M P H+ + +LRY+ GT HG+ ++L L Y DA+WAGD ISW SKKQ V
Subjt: GSLIYLTVTRPDIAYVFHIVSQFMAAPRTIHFTVVLCILRYVKGTLGHGLQFSSQSSLVLSGYYDANWAGDP----------------LISWRSKKQSVV
Query: SRSNTESKYRDLVDATVEFLWLRWLLADMGSPQQGLTLLHCDNRSAIQIAHNDVFHERTKHIENDSHFVHRHLLNNTLLLRSVSTTEQPVDIFTKALPPN
RS+TE++YR + + + E W+ LL ++G +++CDN A + N VFH R KHI D HF+ + + L + VST +Q D TK L
Subjt: SRSNTESKYRDLVDATVEFLWLRWLLADMGSPQQGLTLLHCDNRSAIQIAHNDVFHERTKHIENDSHFVHRHLLNNTLLLRSVSTTEQPVDIFTKALPPN
Query: RFCQLLTKLKLTATLPS
F K+ + PS
Subjt: RFCQLLTKLKLTATLPS
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 1.3e-52 | 39.03 | Show/hide |
Query: STSLYCSSSLCDDMIIIGDDPHAISDLQHYLGQHFEMKDLGSLNYFLGLDVSRRLNGYLLSQAKYVSNLLAHSGITNSNTASTSLEIDPNVYLTPFDGVP
+T C DD+II ++ A+ +L+ L F+++DLG L YFLGL+++R G + Q KY +LL +G+ +S+ +DP+V + G
Subjt: STSLYCSSSLCDDMIIIGDDPHAISDLQHYLGQHFEMKDLGSLNYFLGLDVSRRLNGYLLSQAKYVSNLLAHSGITNSNTASTSLEIDPNVYLTPFDGVP
Query: LEDVSLYRQLVGSLIYLTVTRPDIAYVFHIVSQFMAAPRTIHFTVVLCILRYVKGTLGHGLQFSSQSSLVLSGYYDAN----------------WAGDPL
D YR+L+G L+YL +TR DI++ + +SQF APR H V+ IL Y+KGT+G GL +SSQ+ + L + DA+ + G L
Subjt: LEDVSLYRQLVGSLIYLTVTRPDIAYVFHIVSQFMAAPRTIHFTVVLCILRYVKGTLGHGLQFSSQSSLVLSGYYDAN----------------WAGDPL
Query: ISWRSKKQSVVSRSNTESKYRDLVDATVEFLWLRWLLADMGSPQQGLTLLHCDNRSAIQIAHNDVFHERTKHIENDSHFVHRHLLNNTLLLRSVSTTEQP
ISW+SKKQ VVS+S+ E++YR L AT E +WL ++ P TLL CDN +AI IA N VFHERTKHIE+D H V + L S ++
Subjt: ISWRSKKQSVVSRSNTESKYRDLVDATVEFLWLRWLLADMGSPQQGLTLLHCDNRSAIQIAHNDVFHERTKHIENDSHFVHRHLLNNTLLLRSVSTTEQP
Query: VDIFTKALPP
D FT+ L P
Subjt: VDIFTKALPP
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| ATMG00240.1 Gag-Pol-related retrotransposon family protein | 4.3e-11 | 44.93 | Show/hide |
Query: IYLTVTRPDIAYVFHIVSQFMAAPRTIHFTVVLCILRYVKGTLGHGLQFSSQSSLVLSGYYDANWAGDP
+YLT+TRPD+ + + +SQF +A RT V +L YVKGT+G GL +S+ S L L + D++WA P
Subjt: IYLTVTRPDIAYVFHIVSQFMAAPRTIHFTVVLCILRYVKGTLGHGLQFSSQSSLVLSGYYDANWAGDP
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 1.2e-32 | 36.2 | Show/hide |
Query: DDMIIIGDDPHAISDLQHYLGQHFEMKDLGSLNYFLGLDVSRRLNGYLLSQAKYVSNLLAHSGITNSNTASTSLEIDPNVYLTPFDGVPLEDVSLYRQLV
DD+++ G ++ L L F MKDLG ++YFLG+ + +G LSQ KY +L ++G+ + ST L + N + D S +R +V
Subjt: DDMIIIGDDPHAISDLQHYLGQHFEMKDLGSLNYFLGLDVSRRLNGYLLSQAKYVSNLLAHSGITNSNTASTSLEIDPNVYLTPFDGVPLEDVSLYRQLV
Query: GSLIYLTVTRPDIAYVFHIVSQFMAAPRTIHFTVVLCILRYVKGTLGHGLQFSSQSSLVLSGYYDANWAGDP----------------LISWRSKKQSVV
G+L YLT+TRPDI+Y +IV Q M P F ++ +LRYVKGT+ HGL S L + + D++WAG +ISW +K+Q V
Subjt: GSLIYLTVTRPDIAYVFHIVSQFMAAPRTIHFTVVLCILRYVKGTLGHGLQFSSQSSLVLSGYYDANWAGDP----------------LISWRSKKQSVV
Query: SRSNTESKYRDLVDATVEFLW
SRS+TE++YR L E W
Subjt: SRSNTESKYRDLVDATVEFLW
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