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CSPI07G12420 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G12420
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCDT1-like protein b
Genome locationChr7:10697157..10697594
RNA-Seq ExpressionCSPI07G12420
SyntenyCSPI07G12420
Gene Ontology termsGO:0000076 - DNA replication checkpoint (biological process)
GO:0000278 - mitotic cell cycle (biological process)
GO:0030174 - regulation of DNA-dependent DNA replication initiation (biological process)
GO:0071163 - DNA replication preinitiation complex assembly (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0070182 - DNA polymerase binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646176.1 hypothetical protein Csa_016825 [Cucumis sativus]8.3e-49100Show/hide
Query:  MADASNEVSSSSSSTLPFKSNKPLRSNSKSLLQDPQSLSSKTPEKPAKLSTRTRNCKVSLSIKAIKRATQSVPESNPLLPLDLPTEESKSVRRQIDLLSN
        MADASNEVSSSSSSTLPFKSNKPLRSNSKSLLQDPQSLSSKTPEKPAKLSTRTRNCKVSLSIKAIKRATQSVPESNPLLPLDLPTEESKSVRRQIDLLSN
Subjt:  MADASNEVSSSSSSTLPFKSNKPLRSNSKSLLQDPQSLSSKTPEKPAKLSTRTRNCKVSLSIKAIKRATQSVPESNPLLPLDLPTEESKSVRRQIDLLSN

Query:  ESQSVDNKSKKLPE
        ESQSVDNKSKKLPE
Subjt:  ESQSVDNKSKKLPE

XP_008455861.1 PREDICTED: CDT1-like protein b [Cucumis melo]2.6e-3478.99Show/hide
Query:  MADASNEV----SSSSSSTLPFKSNKPLRSNSKSLLQDPQSLSSKTPEKPAKLSTRTRNCKVSLSIKAIKRATQSVPESNPLLPLDLPTEESKSVRRQID
        MADAS ++    SSSSSSTLPFKS KPLRSNSKSLL+DPQSLSSKTPEKPA+LSTRTRN KV+LSIK +KRA  SV +SN  LPL L  EESKSVRRQID
Subjt:  MADASNEV----SSSSSSTLPFKSNKPLRSNSKSLLQDPQSLSSKTPEKPAKLSTRTRNCKVSLSIKAIKRATQSVPESNPLLPLDLPTEESKSVRRQID

Query:  LLSNESQSVDNKSKKLPEK
        L SNESQSVDNKSKK PEK
Subjt:  LLSNESQSVDNKSKKLPEK

XP_031744903.1 uncharacterized protein LOC105436135 isoform X4 [Cucumis sativus]8.3e-49100Show/hide
Query:  MADASNEVSSSSSSTLPFKSNKPLRSNSKSLLQDPQSLSSKTPEKPAKLSTRTRNCKVSLSIKAIKRATQSVPESNPLLPLDLPTEESKSVRRQIDLLSN
        MADASNEVSSSSSSTLPFKSNKPLRSNSKSLLQDPQSLSSKTPEKPAKLSTRTRNCKVSLSIKAIKRATQSVPESNPLLPLDLPTEESKSVRRQIDLLSN
Subjt:  MADASNEVSSSSSSTLPFKSNKPLRSNSKSLLQDPQSLSSKTPEKPAKLSTRTRNCKVSLSIKAIKRATQSVPESNPLLPLDLPTEESKSVRRQIDLLSN

Query:  ESQSVDNKSKKLPE
        ESQSVDNKSKKLPE
Subjt:  ESQSVDNKSKKLPE

XP_031744904.1 uncharacterized protein LOC105436135 isoform X5 [Cucumis sativus]8.3e-49100Show/hide
Query:  MADASNEVSSSSSSTLPFKSNKPLRSNSKSLLQDPQSLSSKTPEKPAKLSTRTRNCKVSLSIKAIKRATQSVPESNPLLPLDLPTEESKSVRRQIDLLSN
        MADASNEVSSSSSSTLPFKSNKPLRSNSKSLLQDPQSLSSKTPEKPAKLSTRTRNCKVSLSIKAIKRATQSVPESNPLLPLDLPTEESKSVRRQIDLLSN
Subjt:  MADASNEVSSSSSSTLPFKSNKPLRSNSKSLLQDPQSLSSKTPEKPAKLSTRTRNCKVSLSIKAIKRATQSVPESNPLLPLDLPTEESKSVRRQIDLLSN

Query:  ESQSVDNKSKKLPE
        ESQSVDNKSKKLPE
Subjt:  ESQSVDNKSKKLPE

XP_031744905.1 uncharacterized protein LOC105436135 isoform X6 [Cucumis sativus]8.3e-49100Show/hide
Query:  MADASNEVSSSSSSTLPFKSNKPLRSNSKSLLQDPQSLSSKTPEKPAKLSTRTRNCKVSLSIKAIKRATQSVPESNPLLPLDLPTEESKSVRRQIDLLSN
        MADASNEVSSSSSSTLPFKSNKPLRSNSKSLLQDPQSLSSKTPEKPAKLSTRTRNCKVSLSIKAIKRATQSVPESNPLLPLDLPTEESKSVRRQIDLLSN
Subjt:  MADASNEVSSSSSSTLPFKSNKPLRSNSKSLLQDPQSLSSKTPEKPAKLSTRTRNCKVSLSIKAIKRATQSVPESNPLLPLDLPTEESKSVRRQIDLLSN

Query:  ESQSVDNKSKKLPE
        ESQSVDNKSKKLPE
Subjt:  ESQSVDNKSKKLPE

TrEMBL top hitse value%identityAlignment
A0A1S3C211 CDT1-like protein b1.3e-3478.99Show/hide
Query:  MADASNEV----SSSSSSTLPFKSNKPLRSNSKSLLQDPQSLSSKTPEKPAKLSTRTRNCKVSLSIKAIKRATQSVPESNPLLPLDLPTEESKSVRRQID
        MADAS ++    SSSSSSTLPFKS KPLRSNSKSLL+DPQSLSSKTPEKPA+LSTRTRN KV+LSIK +KRA  SV +SN  LPL L  EESKSVRRQID
Subjt:  MADASNEV----SSSSSSTLPFKSNKPLRSNSKSLLQDPQSLSSKTPEKPAKLSTRTRNCKVSLSIKAIKRATQSVPESNPLLPLDLPTEESKSVRRQID

Query:  LLSNESQSVDNKSKKLPEK
        L SNESQSVDNKSKK PEK
Subjt:  LLSNESQSVDNKSKKLPEK

A0A1S3CEP6 CDT1-like protein b1.2e-3276.52Show/hide
Query:  MADASNEVSSSSSSTLPFKSNKPLRSNSKSLLQDPQSLSSKTPEKPAKLSTRTRNCKVSLSIKAIKRATQSVPESNPLLPLDLPTEESKSVRRQIDLLSN
        MADAS ++SSSSSSTLPFK  KPL SN KSLL+D QSLSSKTPEKPA+LSTR+RN KV+LSIK +K+A +SV ESN  LPLDL TEE KSVRRQID  SN
Subjt:  MADASNEVSSSSSSTLPFKSNKPLRSNSKSLLQDPQSLSSKTPEKPAKLSTRTRNCKVSLSIKAIKRATQSVPESNPLLPLDLPTEESKSVRRQIDLLSN

Query:  ESQSVDNKSKKLPEK
        ESQSV+NKS+KLPEK
Subjt:  ESQSVDNKSKKLPEK

A0A5A7TNU2 CDT1-like protein b8.1e-3478.15Show/hide
Query:  MADASNEV----SSSSSSTLPFKSNKPLRSNSKSLLQDPQSLSSKTPEKPAKLSTRTRNCKVSLSIKAIKRATQSVPESNPLLPLDLPTEESKSVRRQID
        MADAS ++    SSSSSSTLPFKS KPL SNSKSLL+DPQSLSSKTPEKPA+LSTRTRN KV+LSIK +KRA  SV +SN  LPL L  EESKSVRRQID
Subjt:  MADASNEV----SSSSSSTLPFKSNKPLRSNSKSLLQDPQSLSSKTPEKPAKLSTRTRNCKVSLSIKAIKRATQSVPESNPLLPLDLPTEESKSVRRQID

Query:  LLSNESQSVDNKSKKLPEK
        L SNESQSVDNKSKK PEK
Subjt:  LLSNESQSVDNKSKKLPEK

A0A5D3BZJ0 CDT1-like protein b1.2e-3276.52Show/hide
Query:  MADASNEVSSSSSSTLPFKSNKPLRSNSKSLLQDPQSLSSKTPEKPAKLSTRTRNCKVSLSIKAIKRATQSVPESNPLLPLDLPTEESKSVRRQIDLLSN
        MADAS ++SSSSSSTLPFK  KPL SN KSLL+D QSLSSKTPEKPA+LSTR+RN KV+LSIK +K+A +SV ESN  LPLDL TEE KSVRRQID  SN
Subjt:  MADASNEVSSSSSSTLPFKSNKPLRSNSKSLLQDPQSLSSKTPEKPAKLSTRTRNCKVSLSIKAIKRATQSVPESNPLLPLDLPTEESKSVRRQIDLLSN

Query:  ESQSVDNKSKKLPEK
        ESQSV+NKS+KLPEK
Subjt:  ESQSVDNKSKKLPEK

A0A5D3DKW1 CDT1-like protein b1.3e-3478.99Show/hide
Query:  MADASNEV----SSSSSSTLPFKSNKPLRSNSKSLLQDPQSLSSKTPEKPAKLSTRTRNCKVSLSIKAIKRATQSVPESNPLLPLDLPTEESKSVRRQID
        MADAS ++    SSSSSSTLPFKS KPLRSNSKSLL+DPQSLSSKTPEKPA+LSTRTRN KV+LSIK +KRA  SV +SN  LPL L  EESKSVRRQID
Subjt:  MADASNEV----SSSSSSTLPFKSNKPLRSNSKSLLQDPQSLSSKTPEKPAKLSTRTRNCKVSLSIKAIKRATQSVPESNPLLPLDLPTEESKSVRRQID

Query:  LLSNESQSVDNKSKKLPEK
        L SNESQSVDNKSKK PEK
Subjt:  LLSNESQSVDNKSKKLPEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGACGCTTCAAACGAAGTTTCTTCTTCATCATCATCAACTTTACCCTTCAAATCGAACAAACCTTTGCGTTCCAACTCCAAATCTTTACTTCAGGATCCACAATC
CTTGAGCTCCAAGACCCCGGAAAAGCCTGCGAAGCTCTCTACCAGAACTAGAAACTGTAAGGTTTCACTTTCGATCAAAGCGATTAAACGAGCTACTCAGAGTGTCCCTG
AATCCAATCCTCTGTTGCCTCTTGATTTGCCTACTGAAGAGAGTAAATCGGTTAGAAGACAAATAGATTTGTTGTCGAATGAAAGTCAATCGGTTGATAATAAGTCCAAG
AAATTGCCTGAGAAGTAA
mRNA sequenceShow/hide mRNA sequence
CACCCAAACAATTTCCCCTTTATTCCCGCCAAATCCATTCCATTTGTAAACCCCCTTAATCACCAATTTTCCTTCTATCACTTCATAACAATGGCGGACGCTTCAAACGA
AGTTTCTTCTTCATCATCATCAACTTTACCCTTCAAATCGAACAAACCTTTGCGTTCCAACTCCAAATCTTTACTTCAGGATCCACAATCCTTGAGCTCCAAGACCCCGG
AAAAGCCTGCGAAGCTCTCTACCAGAACTAGAAACTGTAAGGTTTCACTTTCGATCAAAGCGATTAAACGAGCTACTCAGAGTGTCCCTGAATCCAATCCTCTGTTGCCT
CTTGATTTGCCTACTGAAGAGAGTAAATCGGTTAGAAGACAAATAGATTTGTTGTCGAATGAAAGTCAATCGGTTGATAATAAGTCCAAGAAATTGCCTGAGAAGTAA
Protein sequenceShow/hide protein sequence
MADASNEVSSSSSSTLPFKSNKPLRSNSKSLLQDPQSLSSKTPEKPAKLSTRTRNCKVSLSIKAIKRATQSVPESNPLLPLDLPTEESKSVRRQIDLLSNESQSVDNKSK
KLPEK