; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI07G12570 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G12570
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionneurofilament medium polypeptide-like
Genome locationChr7:10871667..10872379
RNA-Seq ExpressionCSPI07G12570
SyntenyCSPI07G12570
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607636.1 hypothetical protein SDJN03_00978, partial [Cucurbita argyrosperma subsp. sororia]1.9e-0659.65Show/hide
Query:  SDFELNISPTIYNYPSSTFELQLAEGSATPLSLPNETNSMFILTAKLTSFATDDIVI
        S FEL ISPT  + PSSTFEL L + ++T     +ETNSMF+LTAKL  FA DDIV+
Subjt:  SDFELNISPTIYNYPSSTFELQLAEGSATPLSLPNETNSMFILTAKLTSFATDDIVI

KGN44468.1 hypothetical protein Csa_016742 [Cucumis sativus]3.7e-4298.95Show/hide
Query:  MGSDFELNISPTIYNYPSSTFELQLAEGSATPLSLPNETNSMFILTAKLTSFATDDIVIGLLEALETGRKTNLVDRNHEKEEANAEQLRKKMRGP
        MGSDFELNISPTI NYPSSTFELQLAEGSATPLSLPNETNSMFILTAKLTSFATDDIVIGLLEALETGRKTNLVDRNHEKEEANAEQLRKKMRGP
Subjt:  MGSDFELNISPTIYNYPSSTFELQLAEGSATPLSLPNETNSMFILTAKLTSFATDDIVIGLLEALETGRKTNLVDRNHEKEEANAEQLRKKMRGP

XP_022926215.1 neurofilament medium polypeptide-like [Cucurbita moschata]1.4e-0661.4Show/hide
Query:  SDFELNISPTIYNYPSSTFELQLAEGSATPLSLPNETNSMFILTAKLTSFATDDIVI
        S FEL ISPT  + PSSTFEL L + ++T     +ETNSMF+LTAKL  FA DDIVI
Subjt:  SDFELNISPTIYNYPSSTFELQLAEGSATPLSLPNETNSMFILTAKLTSFATDDIVI

XP_022981685.1 uncharacterized protein LOC111480753 [Cucurbita maxima]1.4e-0661.4Show/hide
Query:  SDFELNISPTIYNYPSSTFELQLAEGSATPLSLPNETNSMFILTAKLTSFATDDIVI
        S FEL ISPT  + PSSTFEL L + ++T     +ETNSMF+LTAKL  FA DDIVI
Subjt:  SDFELNISPTIYNYPSSTFELQLAEGSATPLSLPNETNSMFILTAKLTSFATDDIVI

XP_023521223.1 neurofilament medium polypeptide-like [Cucurbita pepo subsp. pepo]1.4e-0661.4Show/hide
Query:  SDFELNISPTIYNYPSSTFELQLAEGSATPLSLPNETNSMFILTAKLTSFATDDIVI
        S FEL ISPT  + PSSTFEL L + ++T     +ETNSMF+LTAKL  FA DDIVI
Subjt:  SDFELNISPTIYNYPSSTFELQLAEGSATPLSLPNETNSMFILTAKLTSFATDDIVI

TrEMBL top hitse value%identityAlignment
A0A0A0K4S9 Uncharacterized protein1.8e-4298.95Show/hide
Query:  MGSDFELNISPTIYNYPSSTFELQLAEGSATPLSLPNETNSMFILTAKLTSFATDDIVIGLLEALETGRKTNLVDRNHEKEEANAEQLRKKMRGP
        MGSDFELNISPTI NYPSSTFELQLAEGSATPLSLPNETNSMFILTAKLTSFATDDIVIGLLEALETGRKTNLVDRNHEKEEANAEQLRKKMRGP
Subjt:  MGSDFELNISPTIYNYPSSTFELQLAEGSATPLSLPNETNSMFILTAKLTSFATDDIVIGLLEALETGRKTNLVDRNHEKEEANAEQLRKKMRGP

A0A6J1CPW6 uncharacterized protein LOC1110134951.0e-0561.02Show/hide
Query:  MGSDFELNISPTIYNYPSSTFELQLAEGSATPLSLPNETNSMFILTAKLTSFATDDIVI
        MG DFEL ISP   +   S FELQLA G+ +P    NETNSMFILTAKLT F+ +DI I
Subjt:  MGSDFELNISPTIYNYPSSTFELQLAEGSATPLSLPNETNSMFILTAKLTSFATDDIVI

A0A6J1EKH3 neurofilament medium polypeptide-like7.0e-0761.4Show/hide
Query:  SDFELNISPTIYNYPSSTFELQLAEGSATPLSLPNETNSMFILTAKLTSFATDDIVI
        S FEL ISPT  + PSSTFEL L + ++T     +ETNSMF+LTAKL  FA DDIVI
Subjt:  SDFELNISPTIYNYPSSTFELQLAEGSATPLSLPNETNSMFILTAKLTSFATDDIVI

A0A6J1J0B1 uncharacterized protein LOC1114807537.0e-0761.4Show/hide
Query:  SDFELNISPTIYNYPSSTFELQLAEGSATPLSLPNETNSMFILTAKLTSFATDDIVI
        S FEL ISPT  + PSSTFEL L + ++T     +ETNSMF+LTAKL  FA DDIVI
Subjt:  SDFELNISPTIYNYPSSTFELQLAEGSATPLSLPNETNSMFILTAKLTSFATDDIVI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATCAGATTTTGAACTAAATATCAGCCCAACAATATATAATTATCCTTCCTCAACCTTTGAGCTTCAGTTGGCCGAAGGCAGTGCTACTCCTCTTTCTTTGCCTAA
TGAAACCAATTCCATGTTCATTCTCACTGCAAAACTCACTAGCTTTGCAACAGATGACATTGTTATAGGTCTGCTTGAGGCTCTGGAAACTGGCAGAAAGACCAATTTGG
TTGACCGTAATCATGAAAAGGAGGAAGCCAATGCTGAGCAGTTGAGGAAGAAAATGCGGGGACCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGATCAGATTTTGAACTAAATATCAGCCCAACAATATATAATTATCCTTCCTCAACCTTTGAGCTTCAGTTGGCCGAAGGCAGTGCTACTCCTCTTTCTTTGCCTAA
TGAAACCAATTCCATGTTCATTCTCACTGCAAAACTCACTAGCTTTGCAACAGATGACATTGTTATAGGTCTGCTTGAGGCTCTGGAAACTGGCAGAAAGACCAATTTGG
TTGACCGTAATCATGAAAAGGAGGAAGCCAATGCTGAGCAGTTGAGGAAGAAAATGCGGGGACCGTAG
Protein sequenceShow/hide protein sequence
MGSDFELNISPTIYNYPSSTFELQLAEGSATPLSLPNETNSMFILTAKLTSFATDDIVIGLLEALETGRKTNLVDRNHEKEEANAEQLRKKMRGP