| GenBank top hits | e value | %identity | Alignment |
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| XP_008454536.1 PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4 [Cucumis melo] | 1.4e-68 | 100 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGRGREDGPGGRPAKGM
MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGRGREDGPGGRPAKGM
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGRGREDGPGGRPAKGM
Query: GRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
Subjt: GRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| XP_011653886.2 probable U6 snRNA-associated Sm-like protein LSm4 [Cucumis sativus] | 7.2e-68 | 98.52 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGRGREDGPGGRPAKGM
MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGRGREDGPGGRPAKGM
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGRGREDGPGGRPAKGM
Query: GRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GRGFDDGAKA++GGRGKGGPGGKPGANRVGGRGRG
Subjt: GRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| XP_011659113.1 sm-like protein LSM4 [Cucumis sativus] | 1.6e-67 | 99.26 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGRGREDGPGGRPAKGM
MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGRGREDGPG RPAKGM
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGRGREDGPGGRPAKGM
Query: GRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
Subjt: GRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| XP_022143617.1 probable U6 snRNA-associated Sm-like protein LSm4 [Momordica charantia] | 9.4e-68 | 97.78 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGRGREDGPGGRPAKGM
MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLG+GRGRGRGREDGPGGRPAKGM
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGRGREDGPGGRPAKGM
Query: GRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GRGFDDG+KA+SGGRGKGGPGGKPGANRVGGRGRG
Subjt: GRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| XP_022926288.1 sm-like protein LSM4 isoform X1 [Cucurbita moschata] | 2.1e-67 | 98.52 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGRGREDGPGGRPAKGM
MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK+RADRKP GVGRGRGRGREDGPGGRPAKGM
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGRGREDGPGGRPAKGM
Query: GRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
Subjt: GRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A0A0K9I4 U6 snRNA-associated Sm-like protein LSm4 | 7.7e-68 | 99.26 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGRGREDGPGGRPAKGM
MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGRGREDGPG RPAKGM
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGRGREDGPGGRPAKGM
Query: GRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
Subjt: GRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| A0A0A0L3Q6 U6 snRNA-associated Sm-like protein LSm4 | 7.7e-68 | 99.26 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGRGREDGPGGRPAKGM
MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGRGREDGPG RPAKGM
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGRGREDGPGGRPAKGM
Query: GRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
Subjt: GRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| A0A1S3BYD6 U6 snRNA-associated Sm-like protein LSm4 | 7.0e-69 | 100 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGRGREDGPGGRPAKGM
MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGRGREDGPGGRPAKGM
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGRGREDGPGGRPAKGM
Query: GRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
Subjt: GRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| A0A6J1CRC5 U6 snRNA-associated Sm-like protein LSm4 | 4.5e-68 | 97.78 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGRGREDGPGGRPAKGM
MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLG+GRGRGRGREDGPGGRPAKGM
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGRGREDGPGGRPAKGM
Query: GRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GRGFDDG+KA+SGGRGKGGPGGKPGANRVGGRGRG
Subjt: GRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| A0A6J1J2N4 U6 snRNA-associated Sm-like protein LSm4 | 1.0e-67 | 98.52 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGRGREDGPGGRPAKGM
MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK+RADRKP GVGRGRGRGREDGPGGRPAKGM
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGRGREDGPGGRPAKGM
Query: GRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
Subjt: GRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| F4K4E3 Sm-like protein LSM4 | 5.2e-45 | 74.81 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGRGREDGPGGRPAKGM
MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEE K+R DRKP GVGRGRGRG +DG
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGRGREDGPGGRPAKGM
Query: GRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GA+ GRG+G GK G NR GRGRG
Subjt: GRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| Q43582 Probable U6 snRNA-associated Sm-like protein LSm4 | 1.4e-50 | 80.15 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR-GREDGPGGRPAKG
MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY+RGNTIKYLRVPDEVIDKVQEE KSR DRKP GVGR R R GR+D GR KG
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR-GREDGPGGRPAKG
Query: MGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
+GRG DDG + GRGKGGP K G R GGRGRG
Subjt: MGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| Q9LGE6 Probable U6 snRNA-associated Sm-like protein LSm4 | 1.6e-49 | 80.29 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEET-KSRADRKPLGVGRGRGRGR-EDGPGGRPAK
MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECYIRGNTIKYLRVPDEVIDKVQEET KSR+DR+P GVGRGRGRG PGGR
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEET-KSRADRKPLGVGRGRGRGR-EDGPGGRPAK
Query: GMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
G+GRG DDG GGRG+GG GGK G + GGRGRG
Subjt: GMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| Q9QXA5 U6 snRNA-associated Sm-like protein LSm4 | 2.3e-32 | 61.11 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGRGREDGPGGRPAKGM
MLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECYIRG+TIKYLR+PDE+ID V+EE GRGRG ++ GR G
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGRGREDGPGGRPAKGM
Query: GRG-FDDGAKAASGGRGKGGPGGKPG
GRG F + G G+G P KPG
Subjt: GRG-FDDGAKAASGGRGKGGPGGKPG
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| Q9ZRU9 Probable U6 snRNA-associated Sm-like protein LSm4 | 1.7e-48 | 78.68 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGRGREDGPGGRPAKGM
MLVELK+GETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMP+CYIRGNTIKYLRVPDEVIDKVQEETKSRADRKP GVGRGRGRGRE+G G R +G
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGRGREDGPGGRPAKGM
Query: GRG-FDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GR AKA RG+G GK G GGRGRG
Subjt: GRG-FDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G20580.1 Small nuclear ribonucleoprotein family protein | 1.0e-08 | 34.15 | Show/hide |
Query: VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD-----EVIDKVQEETKSRADRKPLGVGRGRGRGREDGPGGRPA
VELK+GE Y G ++ C+ N L ++ T+KDG + ++ +IRG+ ++++ +PD + ++ K ++ LGVGRGRG R G+PA
Subjt: VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD-----EVIDKVQEETKSRADRKPLGVGRGRGRGREDGPGGRPA
Query: KGMGRGFDDGAKAASGGRGKGGP
G GRG +GGRG P
Subjt: KGMGRGFDDGAKAASGGRGKGGP
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| AT1G76300.1 snRNP core protein SMD3 | 5.2e-08 | 32.77 | Show/hide |
Query: VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVID-KVQEETKSRADRKPLGVGRGRGRGREDGPGGRPAKGMG
VE+K+GE Y G ++ C+ N L + T+KDG + ++ +IRG+ +++L +PD + + + ++ + + LGVGRGRG AKG G
Subjt: VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVID-KVQEETKSRADRKPLGVGRGRGRGREDGPGGRPAKGMG
Query: RGFDDGAKAASGGRGKGGP
RG GGRG P
Subjt: RGFDDGAKAASGGRGKGGP
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| AT4G02840.1 Small nuclear ribonucleoprotein family protein | 1.8e-08 | 39.6 | Show/hide |
Query: VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD--EVIDKVQEET------KSRADRKPLGVGRGRGRGREDGPGG
+ELKNG +G + D MN HL+ V T K G + +RGN I+Y +PD + + E+T K A + P G GRGRGRGR G GG
Subjt: VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD--EVIDKVQEET------KSRADRKPLGVGRGRGRGREDGPGG
Query: R
R
Subjt: R
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| AT4G02840.2 Small nuclear ribonucleoprotein family protein | 3.7e-06 | 36.04 | Show/hide |
Query: VELKNGETYNGHLVN----------CDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD--EVIDKVQEET------KSRADRKPLGVGRGR
+ELKNG +G + + D MN HL+ V T K G + +RGN I+Y +PD + + E+T K A + P G GRGR
Subjt: VELKNGETYNGHLVN----------CDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD--EVIDKVQEET------KSRADRKPLGVGRGR
Query: GRGREDGPGGR
GRGR G GGR
Subjt: GRGREDGPGGR
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| AT5G27720.1 Small nuclear ribonucleoprotein family protein | 3.7e-46 | 74.81 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGRGREDGPGGRPAKGM
MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEE K+R DRKP GVGRGRGRG +DG
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGRGREDGPGGRPAKGM
Query: GRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GA+ GRG+G GK G NR GRGRG
Subjt: GRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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