CuGenDBv2

Gene ID	CSPI07G12680
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Transposon TX1 uncharacterized 149 kDa protein
Genome location	Chr7:10967319..10968345
RNA-Seq Expression	CSPI07G12680
Synteny	CSPI07G12680
Gene Ontology terms	GO:0090304 - nucleic acid metabolic process (biological process) GO:0003824 - catalytic activity (molecular function) GO:0097159 - organic cyclic compound binding (molecular function) GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

RVW64408.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]

1.9e-34

31.16

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Query:  WGPTPFRLENAWLDHHLFLKNVENWW--------------------------------GSL----DVLIDKINSLDSLEESSCLNEENAKEREICRVALL
        WGPTPFR EN WL H  F +    WW                                G L     +++  ++ +D +E+   LN +   ER + R  L 
Subjt:  WGPTPFRLENAWLDHHLFLKNVENWW--------------------------------GSL----DVLIDKINSLDSLEESSCLNEENAKEREICRVALL

Query:  DLIVKEQKMWIQKSKLHWLREGEENSSFFHIWVSTRKCKSIISSLVSIERKTLVTEKEIVDEILSLFSNLYGTRISSSFICDSLNRRGLSLQDSSLLEVP
        D+++KE+  W QKS++ W++EG+ NS FFH   + R+ +  I SL+S   +TL   ++I +EI++ F NLY   +  S+  + ++   +S +    L+ P
Subjt:  DLIVKEQKMWIQKSKLHWLREGEENSSFFHIWVSTRKCKSIISSLVSIERKTLVTEKEIVDEILSLFSNLYGTRISSSFICDSLNRRGLSLQDSSLLEVP

Query:  FTEKEIREAVFEMSCLKSPCPDGMTGEFYKKSWNILKSDLKEV----------------------------ARVNDFKPISLVTSLYKVISK
        FTE+E+R AVF+++  K+P PDG T   Y++ W+++K DL  V                             +++D++PISLVTSLYK+I+K
Subjt:  FTEKEIREAVFEMSCLKSPCPDGMTGEFYKKSWNILKSDLKEV----------------------------ARVNDFKPISLVTSLYKVISK

RVW67743.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]

5.6e-34

31.16

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Query:  WGPTPFRLENAWLDHHLFLKNVENWWGSLDV------------------------------------LIDKINSLDSLEESSCLNEENAKEREICRVALL
        WGPTPFR EN WL H  F +   +WW    V                                    ++  +  +D +E+   LN +   ER + R  L 
Subjt:  WGPTPFRLENAWLDHHLFLKNVENWWGSLDV------------------------------------LIDKINSLDSLEESSCLNEENAKEREICRVALL

Query:  DLIVKEQKMWIQKSKLHWLREGEENSSFFHIWVSTRKCKSIISSLVSIERKTLVTEKEIVDEILSLFSNLYGTRISSSFICDSLNRRGLSLQDSSLLEVP
        DL++KE+  W QKS++ W++EG+ NS FFH   + R+ +  I SL+  E +TL   + I +EI++ F NLY      S++ + ++   +S + +  L+ P
Subjt:  DLIVKEQKMWIQKSKLHWLREGEENSSFFHIWVSTRKCKSIISSLVSIERKTLVTEKEIVDEILSLFSNLYGTRISSSFICDSLNRRGLSLQDSSLLEVP

Query:  FTEKEIREAVFEMSCLKSPCPDGMTGEFYKKSWNILKSDLKEV----------------------------ARVNDFKPISLVTSLYKVISK
        F+E+EIR  VF+++  K+P PDG T   Y+K W+++K DL  V                             +++D++PISLVTSLYK+I+K
Subjt:  FTEKEIREAVFEMSCLKSPCPDGMTGEFYKKSWNILKSDLKEV----------------------------ARVNDFKPISLVTSLYKVISK

RVX05721.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]

7.3e-34

31.16

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Query:  WGPTPFRLENAWLDHHLFLKNVENWW--------------------------------GSL----DVLIDKINSLDSLEESSCLNEENAKEREICRVALL
        WGPTPFR EN WL H  F +    WW                                G L     +++  ++ +D +E+   LN +   ER + R  L 
Subjt:  WGPTPFRLENAWLDHHLFLKNVENWW--------------------------------GSL----DVLIDKINSLDSLEESSCLNEENAKEREICRVALL

Query:  DLIVKEQKMWIQKSKLHWLREGEENSSFFHIWVSTRKCKSIISSLVSIERKTLVTEKEIVDEILSLFSNLYGTRISSSFICDSLNRRGLSLQDSSLLEVP
        D+++KE+  W QKS++ W++EG+ NS FFH   + R+ +  I SL+S   +TL   ++I +EI++ F NLY   +  S+  + ++   +S +    L+ P
Subjt:  DLIVKEQKMWIQKSKLHWLREGEENSSFFHIWVSTRKCKSIISSLVSIERKTLVTEKEIVDEILSLFSNLYGTRISSSFICDSLNRRGLSLQDSSLLEVP

Query:  FTEKEIREAVFEMSCLKSPCPDGMTGEFYKKSWNILKSDLKEV----------------------------ARVNDFKPISLVTSLYKVISK
        FTE+E+R AVF+++  K+P PDG T   Y++ W+++K DL  V                             +++D++PISLVTSLYK+I+K
Subjt:  FTEKEIREAVFEMSCLKSPCPDGMTGEFYKKSWNILKSDLKEV----------------------------ARVNDFKPISLVTSLYKVISK

RVX14115.1 Protein SWEETIE [Vitis vinifera]

1.5e-34

34.96

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Query:  WGPTPFRLENAWLDHHLFLKNVENWW--------------------------------GSL-----DVLIDKINSLDSLEESSCLNEENAKEREICRVAL
        WGPTPFR EN WL H  F +N   WW                                G L     D+L D +N  DSLE+   L+ E   +R + +  L
Subjt:  WGPTPFRLENAWLDHHLFLKNVENWW--------------------------------GSL-----DVLIDKINSLDSLEESSCLNEENAKEREICRVAL

Query:  LDLIVKEQKMWIQKSKLHWLREGEENSSFFHIWVSTRKCKSIISSLVSIERKTLVTEKEIVDEILSLFSNLYGTRISSSFICDSLNRRGLSLQDSSLLEV
         +LI++E+  W QK+++ W++EG+ NS FFH   + R+ +  I  L +     +   + I +EIL  F  LY +    S+  + L+   +S + +  LE 
Subjt:  LDLIVKEQKMWIQKSKLHWLREGEENSSFFHIWVSTRKCKSIISSLVSIERKTLVTEKEIVDEILSLFSNLYGTRISSSFICDSLNRRGLSLQDSSLLEV

Query:  PFTEKEIREAVFEMSCLKSPCPDGMTGEFYKKSWNILKSDL-KEVARVNDFKPISLVTSLYKVISK
        PFTE+EI +A+F+M   K+P PDG T   ++  W ++K DL K + R++DF+PISL+TSLYK+I+K
Subjt:  PFTEKEIREAVFEMSCLKSPCPDGMTGEFYKKSWNILKSDL-KEVARVNDFKPISLVTSLYKVISK

TYK01560.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]

1.0e-40

64.79

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Query:  CRVALLDLIVKEQKMWIQKSKLHWLREGEENSSFFHIWVSTRKCKSIISSLVSIERKTLVTEKEIVDEILSLFSNLYGTRISSSFICDSLNRRGLSLQDS
        CR ALLDLIVKEQK+WI+K  L W  EGEEN SFFH W+S RK KSIIS L+SI+ + LVT+KEIVDEILSL S+LYGT+ S SFICD  N + L L  S
Subjt:  CRVALLDLIVKEQKMWIQKSKLHWLREGEENSSFFHIWVSTRKCKSIISSLVSIERKTLVTEKEIVDEILSLFSNLYGTRISSSFICDSLNRRGLSLQDS

Query:  SLLEVPFTEKEIREAVFEMSCLKSPCPDGMTGEFYKKSWNIL
        S LE PF+EKEIR+AVFEM CLKSP PDG    + +  W  L
Subjt:  SLLEVPFTEKEIREAVFEMSCLKSPCPDGMTGEFYKKSWNIL

TrEMBL top hits

e value

%identity

Alignment

A0A438FWU5 LINE-1 retrotransposable element ORF2 protein

9.3e-35

31.16

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Query:  WGPTPFRLENAWLDHHLFLKNVENWW--------------------------------GSL----DVLIDKINSLDSLEESSCLNEENAKEREICRVALL
        WGPTPFR EN WL H  F +    WW                                G L     +++  ++ +D +E+   LN +   ER + R  L 
Subjt:  WGPTPFRLENAWLDHHLFLKNVENWW--------------------------------GSL----DVLIDKINSLDSLEESSCLNEENAKEREICRVALL

Query:  DLIVKEQKMWIQKSKLHWLREGEENSSFFHIWVSTRKCKSIISSLVSIERKTLVTEKEIVDEILSLFSNLYGTRISSSFICDSLNRRGLSLQDSSLLEVP
        D+++KE+  W QKS++ W++EG+ NS FFH   + R+ +  I SL+S   +TL   ++I +EI++ F NLY   +  S+  + ++   +S +    L+ P
Subjt:  DLIVKEQKMWIQKSKLHWLREGEENSSFFHIWVSTRKCKSIISSLVSIERKTLVTEKEIVDEILSLFSNLYGTRISSSFICDSLNRRGLSLQDSSLLEVP

Query:  FTEKEIREAVFEMSCLKSPCPDGMTGEFYKKSWNILKSDLKEV----------------------------ARVNDFKPISLVTSLYKVISK
        FTE+E+R AVF+++  K+P PDG T   Y++ W+++K DL  V                             +++D++PISLVTSLYK+I+K
Subjt:  FTEKEIREAVFEMSCLKSPCPDGMTGEFYKKSWNILKSDLKEV----------------------------ARVNDFKPISLVTSLYKVISK

A0A438G6A4 Transposon TX1 uncharacterized 149 kDa protein

2.7e-34

31.16

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Query:  WGPTPFRLENAWLDHHLFLKNVENWWGSLDV------------------------------------LIDKINSLDSLEESSCLNEENAKEREICRVALL
        WGPTPFR EN WL H  F +   +WW    V                                    ++  +  +D +E+   LN +   ER + R  L 
Subjt:  WGPTPFRLENAWLDHHLFLKNVENWWGSLDV------------------------------------LIDKINSLDSLEESSCLNEENAKEREICRVALL

Query:  DLIVKEQKMWIQKSKLHWLREGEENSSFFHIWVSTRKCKSIISSLVSIERKTLVTEKEIVDEILSLFSNLYGTRISSSFICDSLNRRGLSLQDSSLLEVP
        DL++KE+  W QKS++ W++EG+ NS FFH   + R+ +  I SL+  E +TL   + I +EI++ F NLY      S++ + ++   +S + +  L+ P
Subjt:  DLIVKEQKMWIQKSKLHWLREGEENSSFFHIWVSTRKCKSIISSLVSIERKTLVTEKEIVDEILSLFSNLYGTRISSSFICDSLNRRGLSLQDSSLLEVP

Query:  FTEKEIREAVFEMSCLKSPCPDGMTGEFYKKSWNILKSDLKEV----------------------------ARVNDFKPISLVTSLYKVISK
        F+E+EIR  VF+++  K+P PDG T   Y+K W+++K DL  V                             +++D++PISLVTSLYK+I+K
Subjt:  FTEKEIREAVFEMSCLKSPCPDGMTGEFYKKSWNILKSDLKEV----------------------------ARVNDFKPISLVTSLYKVISK

A0A438J9S5 Transposon TX1 uncharacterized 149 kDa protein

3.5e-34

31.16

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Query:  WGPTPFRLENAWLDHHLFLKNVENWW--------------------------------GSL----DVLIDKINSLDSLEESSCLNEENAKEREICRVALL
        WGPTPFR EN WL H  F +    WW                                G L     +++  ++ +D +E+   LN +   ER + R  L 
Subjt:  WGPTPFRLENAWLDHHLFLKNVENWW--------------------------------GSL----DVLIDKINSLDSLEESSCLNEENAKEREICRVALL

Query:  DLIVKEQKMWIQKSKLHWLREGEENSSFFHIWVSTRKCKSIISSLVSIERKTLVTEKEIVDEILSLFSNLYGTRISSSFICDSLNRRGLSLQDSSLLEVP
        D+++KE+  W QKS++ W++EG+ NS FFH   + R+ +  I SL+S   +TL   ++I +EI++ F NLY   +  S+  + ++   +S +    L+ P
Subjt:  DLIVKEQKMWIQKSKLHWLREGEENSSFFHIWVSTRKCKSIISSLVSIERKTLVTEKEIVDEILSLFSNLYGTRISSSFICDSLNRRGLSLQDSSLLEVP

Query:  FTEKEIREAVFEMSCLKSPCPDGMTGEFYKKSWNILKSDLKEV----------------------------ARVNDFKPISLVTSLYKVISK
        FTE+E+R AVF+++  K+P PDG T   Y++ W+++K DL  V                             +++D++PISLVTSLYK+I+K
Subjt:  FTEKEIREAVFEMSCLKSPCPDGMTGEFYKKSWNILKSDLKEV----------------------------ARVNDFKPISLVTSLYKVISK

A0A438JYU3 Protein SWEETIE

7.1e-35

34.96

Show/hide

Query:  WGPTPFRLENAWLDHHLFLKNVENWW--------------------------------GSL-----DVLIDKINSLDSLEESSCLNEENAKEREICRVAL
        WGPTPFR EN WL H  F +N   WW                                G L     D+L D +N  DSLE+   L+ E   +R + +  L
Subjt:  WGPTPFRLENAWLDHHLFLKNVENWW--------------------------------GSL-----DVLIDKINSLDSLEESSCLNEENAKEREICRVAL

Query:  LDLIVKEQKMWIQKSKLHWLREGEENSSFFHIWVSTRKCKSIISSLVSIERKTLVTEKEIVDEILSLFSNLYGTRISSSFICDSLNRRGLSLQDSSLLEV
         +LI++E+  W QK+++ W++EG+ NS FFH   + R+ +  I  L +     +   + I +EIL  F  LY +    S+  + L+   +S + +  LE 
Subjt:  LDLIVKEQKMWIQKSKLHWLREGEENSSFFHIWVSTRKCKSIISSLVSIERKTLVTEKEIVDEILSLFSNLYGTRISSSFICDSLNRRGLSLQDSSLLEV

Query:  PFTEKEIREAVFEMSCLKSPCPDGMTGEFYKKSWNILKSDL-KEVARVNDFKPISLVTSLYKVISK
        PFTE+EI +A+F+M   K+P PDG T   ++  W ++K DL K + R++DF+PISL+TSLYK+I+K
Subjt:  PFTEKEIREAVFEMSCLKSPCPDGMTGEFYKKSWNILKSDL-KEVARVNDFKPISLVTSLYKVISK

A0A5D3BR42 LINE-1 retrotransposable element ORF2 protein

5.1e-41

64.79

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Query:  CRVALLDLIVKEQKMWIQKSKLHWLREGEENSSFFHIWVSTRKCKSIISSLVSIERKTLVTEKEIVDEILSLFSNLYGTRISSSFICDSLNRRGLSLQDS
        CR ALLDLIVKEQK+WI+K  L W  EGEEN SFFH W+S RK KSIIS L+SI+ + LVT+KEIVDEILSL S+LYGT+ S SFICD  N + L L  S
Subjt:  CRVALLDLIVKEQKMWIQKSKLHWLREGEENSSFFHIWVSTRKCKSIISSLVSIERKTLVTEKEIVDEILSLFSNLYGTRISSSFICDSLNRRGLSLQDS

Query:  SLLEVPFTEKEIREAVFEMSCLKSPCPDGMTGEFYKKSWNIL
        S LE PF+EKEIR+AVFEM CLKSP PDG    + +  W  L
Subjt:  SLLEVPFTEKEIREAVFEMSCLKSPCPDGMTGEFYKKSWNIL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G43760.1 DNAse I-like superfamily protein

5.4e-11

24.46

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Query:  DKINSLDSLEESSCLNEENA--KEREICRVALLDLIVKEQKMWIQKSKLHWLREGEENSSFFHIWVSTRKCKSIISSLVSIERKTLVTEKEIVDEILSLF
        + ++SL+S++     N  ++  +   + R          +  + QKS++ WL++G+ N+ FFH  +   + K++I  L   +   +    ++ + I++ +
Subjt:  DKINSLDSLEESSCLNEENA--KEREICRVALLDLIVKEQKMWIQKSKLHWLREGEENSSFFHIWVSTRKCKSIISSLVSIERKTLVTEKEIVDEILSLF

Query:  SNLYGTRISSSFICDSLNR-------RGLSLQDSSLLEVPFTEKEIREAVFEMSCLKSPCPDGMTGEFYKKSWNILKSD----LKE--------------
        ++L G+  S     DS+ R       R      S L  +P ++KEI  AVF M   K+P PD  T EF+ +SW ++K      +KE              
Subjt:  SNLYGTRISSSFICDSLNR-------RGLSLQDSSLLEVPFTEKEIREAVFEMSCLKSPCPDGMTGEFYKKSWNILKSD----LKE--------------

Query:  ----------VARVNDFKPISLVTSLYKVISKN
                  V +++ F+P+S  T +YK+I+ N
Subjt:  ----------VARVNDFKPISLVTSLYKVISKN

Sequences

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CDS sequence

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ATGGGGGCACATTCCTGGGGTCCCACACCTTTTAGACTTGAAAATGCTTGGCTGGATCATCATCTTTTCTTAAAAAATGTTGAGAACTGGTGGGGCAGTTTGGATGTGCT
GATTGATAAGATTAACTCTCTTGACTCACTTGAAGAGTCGAGTTGTCTCAACGAGGAGAATGCGAAGGAAAGAGAAATTTGTAGAGTGGCTTTGCTTGATTTGATTGTGA
AAGAACAAAAGATGTGGATTCAGAAGTCAAAGCTTCATTGGCTTAGAGAGGGGGAGGAGAACTCAAGCTTCTTCCACATATGGGTTTCGACTCGTAAATGTAAAAGTATT
ATTTCTTCTTTGGTTAGTATCGAAAGGAAGACTCTTGTCACAGAGAAGGAAATTGTGGATGAGATCCTTAGTTTATTTTCAAATTTATATGGCACAAGGATCTCCTCGTC
GTTTATTTGTGACAGTCTTAACCGGAGAGGCCTTAGCTTACAGGATTCGAGTTTACTTGAGGTTCCCTTTACCGAAAAAGAAATTAGAGAAGCTGTCTTTGAGATGAGTT
GTCTCAAGTCCCCTTGCCCTGATGGCATGACTGGAGAGTTTTATAAAAAATCGTGGAACATTCTGAAGTCCGACCTAAAAGAGGTGGCCCGTGTCAATGACTTCAAACCC
ATAAGCTTAGTTACCTCCTTGTATAAAGTTATCTCCAAGAACAACCTAAGGGCGAGGGACAAGAGGGCCCTCCCCGGAAGAAGCTAA

mRNA sequence

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Protein sequence

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MGAHSWGPTPFRLENAWLDHHLFLKNVENWWGSLDVLIDKINSLDSLEESSCLNEENAKEREICRVALLDLIVKEQKMWIQKSKLHWLREGEENSSFFHIWVSTRKCKSI
ISSLVSIERKTLVTEKEIVDEILSLFSNLYGTRISSSFICDSLNRRGLSLQDSSLLEVPFTEKEIREAVFEMSCLKSPCPDGMTGEFYKKSWNILKSDLKEVARVNDFKP
ISLVTSLYKVISKNNLRARDKRALPGRS

CSPI07G12680 (gene) of Cucumber (PI 183967) v1 genome