; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI07G12730 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G12730
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUBN2_3 domain-containing protein
Genome locationChr7:11014564..11015906
RNA-Seq ExpressionCSPI07G12730
SyntenyCSPI07G12730
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037350.1 Integrase, catalytic core [Cucumis melo var. makuwa]5.7e-2631.59Show/hide
Query:  FGIKTTVEKEILEHISIMETPKKAWDTFASLFSKKNDARLQVLENELLLIAQREMTIN-HFTKV------------------------------------
        F IKTT+++E+LEHISIMETPKK WDTF SLFSKKNDARLQ LENELL I QRE TIN +FTKV                                    
Subjt:  FGIKTTVEKEILEHISIMETPKKAWDTFASLFSKKNDARLQVLENELLLIAQREMTIN-HFTKV------------------------------------

Query:  ------------------------------------------------------------------------ESISGEEWDADPYYATTDPDPQSVSNVM
                                                                                +SIS EE DA+   ATTDP+PQ  S+V+
Subjt:  ------------------------------------------------------------------------ESISGEEWDADPYYATTDPDPQSVSNVM

Query:  ENKVLALHVDE-----NWKA---CVMCLNAEK--------------------------------------------------------FVPISQLTSAGK
        EN+VL LH +E     +W A   C   +  +K                                                         V +SQLTSA  
Subjt:  ENKVLALHVDE-----NWKA---CVMCLNAEK--------------------------------------------------------FVPISQLTSAGK

Query:  FFVFGPNGVKVYQDLEASGKLLMERQEMDSIYIMLAEDAYMDRQR
        F VFG + VKVY +L+ SG  LME + MDSIY+M A+ AY+++ R
Subjt:  FFVFGPNGVKVYQDLEASGKLLMERQEMDSIYIMLAEDAYMDRQR

KAA0037956.1 glutamate receptor 2.8-like [Cucumis melo var. makuwa]5.4e-3241.67Show/hide
Query:  MFGIKTTVEKEILEHISIMETPKKAWDTFASLFSKKNDARLQVLENELLLIAQREMTIN-HFTKVE--------SISGEEWDADPYYATT----------
        MF IKTT+ +E+LEHISIMETPKKAWDTF SLFSKKNDARLQ LE +LL I QREMTIN +FTKV+         ++ +E  A+     T          
Subjt:  MFGIKTTVEKEILEHISIMETPKKAWDTFASLFSKKNDARLQVLENELLLIAQREMTIN-HFTKVE--------SISGEEWDADPYYATT----------

Query:  -----DPDPQSVSNVMENKVLALHVDE-------------------NWKACVMCLNAEKFVP------------------------ISQLTSAGKFFVFG
             DP+PQ  SNV+EN+VLA H +E                   N K  +  +     VP                        +SQLT  G F VFG
Subjt:  -----DPDPQSVSNVMENKVLALHVDE-------------------NWKACVMCLNAEKFVP------------------------ISQLTSAGKFFVFG

Query:  PNGVKVYQDLEASGKLLMERQEMDSIYIMLAEDAYMDRQR
         + VKVY +L+ SG  LME + ++SIYI+  E AY+++ R
Subjt:  PNGVKVYQDLEASGKLLMERQEMDSIYIMLAEDAYMDRQR

KAA0045163.1 UBN2_3 domain-containing protein [Cucumis melo var. makuwa]1.4e-3555.43Show/hide
Query:  MFGIKTTVEKEILEHISIMETPKKAWDTFASLFSKKNDARLQVLENELLLIAQREMTIN-HFTKVESISGEEWDADPYYATTDPDPQSVSNVMENKVLAL
        MF IKTT++KE+LEHISIMETPKKAWDTFASLFSKKNDARLQ LENELL I QREMTIN +FTK+            Y+                     
Subjt:  MFGIKTTVEKEILEHISIMETPKKAWDTFASLFSKKNDARLQVLENELLLIAQREMTIN-HFTKVESISGEEWDADPYYATTDPDPQSVSNVMENKVLAL

Query:  HVDENWKACVMCLNAEK-FVPISQLTSAGKFFVFGPNGVKVYQDLEASGKLLMERQEMDSIYIMLAEDAYMDRQR
                  MC   +K  VPISQLTSAG F VFGP  VKVY +L+ SG  LME Q MDSIY+MLAE  YM++ R
Subjt:  HVDENWKACVMCLNAEK-FVPISQLTSAGKFFVFGPNGVKVYQDLEASGKLLMERQEMDSIYIMLAEDAYMDRQR

KAA0059175.1 Zinc finger, CCHC-type [Cucumis melo var. makuwa]6.8e-2750Show/hide
Query:  MFGIKTTVEKEILEHISIMETPKKAWDTFASLFSKKNDARLQVLENELLLIAQREMTIN-HFTK------------------------------------
        MF IKTT+++E+LEH+SI++TPKKAWDTFASLFSKKNDARLQ LEN+LL I QREMTIN +FTK                                    
Subjt:  MFGIKTTVEKEILEHISIMETPKKAWDTFASLFSKKNDARLQVLENELLLIAQREMTIN-HFTK------------------------------------

Query:  --------------VESISGEEWDADPYYATTDPDPQSVSNVMENKVLALHVDE
                      VES S EEWD +   ATTDP+PQS SNVMEN+VLALH ++
Subjt:  --------------VESISGEEWDADPYYATTDPDPQSVSNVMENKVLALHVDE

KAG6498151.1 hypothetical protein ZIOFF_046060 [Zingiber officinale]2.7e-2334.69Show/hide
Query:  MFGIKTTVEKEILEHISIMETPKKAWDTFASLFSKKNDARLQVLENELLLIAQREMTI-NHFTKVESISGEEWDADP-----------------------
        MF +K T+E+E+LEHI   +TPK+ WDTFA+LFSKKNDARLQ+LENELL I QR+ TI  +F KV+SI  E  + DP                       
Subjt:  MFGIKTTVEKEILEHISIMETPKKAWDTFASLFSKKNDARLQVLENELLLIAQREMTI-NHFTKVESISGEEWDADP-----------------------

Query:  YYATTDPDPQSVSNVMENKVLALHVDENWKACVMCLNAEK-----------------------------------------FVPISQLTSAGKFFVFGPN
        + A     P   S +    +LA       +   + L  E+                                          + +SQLTS+G + +FGP 
Subjt:  YYATTDPDPQSVSNVMENKVLALHVDENWKACVMCLNAEK-----------------------------------------FVPISQLTSAGKFFVFGPN

Query:  GVKVYQDLEASGKLLMERQEMDSIYIMLAEDAYMDRQRHLVTECI
         VKVYQ+L+ S   +ME Q ++S+Y+M AE AY+D+ R   T  I
Subjt:  GVKVYQDLEASGKLLMERQEMDSIYIMLAEDAYMDRQRHLVTECI

TrEMBL top hitse value%identityAlignment
A0A0A0K4U2 Uncharacterized protein2.4e-3896.51Show/hide
Query:  MCLNAEKFVPISQLTSAGKFFVFGPNGVKVYQDLEASGKLLMERQEMDSIYIMLAEDAYMDRQRHLVTECIDSIDEQCHTINEALS
        MCLNAEKFVPISQLTSAGKF VFGPNGVKVYQDLEASGKLLMERQEMDSIYIMLAEDAYMD QRHLVTECIDS DEQCHTINEALS
Subjt:  MCLNAEKFVPISQLTSAGKFFVFGPNGVKVYQDLEASGKLLMERQEMDSIYIMLAEDAYMDRQRHLVTECIDSIDEQCHTINEALS

A0A2N9FTF3 CCHC-type domain-containing protein2.1e-2942.11Show/hide
Query:  MFGIKTTVEKEILEHISIMETPKKAWDTFASLFSKKNDARLQVLENELLLIAQREMTI-NHFTK-------------VESISGEEWDADPYYATTDPDPQ
        MF IKT++E+E+LEHI   +TPK AWDTFA+LFSKKN+ RLQ+LENEL+ IAQR MTI  +FTK              E  S EEWDA+  ++  +P  +
Subjt:  MFGIKTTVEKEILEHISIMETPKKAWDTFASLFSKKNDARLQVLENELLLIAQREMTI-NHFTK-------------VESISGEEWDADPYYATTDPDPQ

Query:  ----SVSNVMENKVLALHV--------DENWKACVMCLN-----AEKF-----VPISQLTSAGKFFVFGPNGVKVYQDLEASGKLLMERQEMDSIYIMLA
            + S V E++ +AL V         E+W     C N      EK        ++QL  +G + +FGP  VKVY+++   G   ME Q M+S+Y+M A
Subjt:  ----SVSNVMENKVLALHV--------DENWKACVMCLN-----AEKF-----VPISQLTSAGKFFVFGPNGVKVYQDLEASGKLLMERQEMDSIYIMLA

Query:  EDAYMDRQR
        E AY+D+ R
Subjt:  EDAYMDRQR

A0A5A7T6Z1 Glutamate receptor 2.8-like2.6e-3241.67Show/hide
Query:  MFGIKTTVEKEILEHISIMETPKKAWDTFASLFSKKNDARLQVLENELLLIAQREMTIN-HFTKVE--------SISGEEWDADPYYATT----------
        MF IKTT+ +E+LEHISIMETPKKAWDTF SLFSKKNDARLQ LE +LL I QREMTIN +FTKV+         ++ +E  A+     T          
Subjt:  MFGIKTTVEKEILEHISIMETPKKAWDTFASLFSKKNDARLQVLENELLLIAQREMTIN-HFTKVE--------SISGEEWDADPYYATT----------

Query:  -----DPDPQSVSNVMENKVLALHVDE-------------------NWKACVMCLNAEKFVP------------------------ISQLTSAGKFFVFG
             DP+PQ  SNV+EN+VLA H +E                   N K  +  +     VP                        +SQLT  G F VFG
Subjt:  -----DPDPQSVSNVMENKVLALHVDE-------------------NWKACVMCLNAEKFVP------------------------ISQLTSAGKFFVFG

Query:  PNGVKVYQDLEASGKLLMERQEMDSIYIMLAEDAYMDRQR
         + VKVY +L+ SG  LME + ++SIYI+  E AY+++ R
Subjt:  PNGVKVYQDLEASGKLLMERQEMDSIYIMLAEDAYMDRQR

A0A5A7TNQ2 UBN2_3 domain-containing protein6.6e-3655.43Show/hide
Query:  MFGIKTTVEKEILEHISIMETPKKAWDTFASLFSKKNDARLQVLENELLLIAQREMTIN-HFTKVESISGEEWDADPYYATTDPDPQSVSNVMENKVLAL
        MF IKTT++KE+LEHISIMETPKKAWDTFASLFSKKNDARLQ LENELL I QREMTIN +FTK+            Y+                     
Subjt:  MFGIKTTVEKEILEHISIMETPKKAWDTFASLFSKKNDARLQVLENELLLIAQREMTIN-HFTKVESISGEEWDADPYYATTDPDPQSVSNVMENKVLAL

Query:  HVDENWKACVMCLNAEK-FVPISQLTSAGKFFVFGPNGVKVYQDLEASGKLLMERQEMDSIYIMLAEDAYMDRQR
                  MC   +K  VPISQLTSAG F VFGP  VKVY +L+ SG  LME Q MDSIY+MLAE  YM++ R
Subjt:  HVDENWKACVMCLNAEK-FVPISQLTSAGKFFVFGPNGVKVYQDLEASGKLLMERQEMDSIYIMLAEDAYMDRQR

A0A5A7V002 Zinc finger, CCHC-type3.3e-2750Show/hide
Query:  MFGIKTTVEKEILEHISIMETPKKAWDTFASLFSKKNDARLQVLENELLLIAQREMTIN-HFTK------------------------------------
        MF IKTT+++E+LEH+SI++TPKKAWDTFASLFSKKNDARLQ LEN+LL I QREMTIN +FTK                                    
Subjt:  MFGIKTTVEKEILEHISIMETPKKAWDTFASLFSKKNDARLQVLENELLLIAQREMTIN-HFTK------------------------------------

Query:  --------------VESISGEEWDADPYYATTDPDPQSVSNVMENKVLALHVDE
                      VES S EEWD +   ATTDP+PQS SNVMEN+VLALH ++
Subjt:  --------------VESISGEEWDADPYYATTDPDPQSVSNVMENKVLALHVDE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGGAATTAAAACTACAGTTGAAAAAGAAATATTGGAGCACATTAGTATTATGGAGACACCAAAGAAAGCATGGGACACATTTGCCTCACTTTTCTCAAAGAAGAA
TGATGCAAGATTGCAGGTTTTAGAAAACGAGCTCCTGTTAATCGCTCAAAGGGAGATGACTATCAACCATTTCACTAAGGTTGAGAGCATTAGTGGTGAAGAATGGGATG
CAGATCCATACTATGCAACAACAGATCCCGACCCCCAATCGGTATCCAATGTGATGGAGAATAAAGTGTTGGCTCTCCATGTAGACGAGAACTGGAAAGCATGCGTTATG
TGCCTTAATGCAGAAAAATTTGTGCCAATATCTCAATTGACATCAGCAGGCAAATTTTTCGTGTTTGGACCAAATGGTGTTAAGGTTTACCAAGATTTGGAAGCCAGTGG
CAAGCTATTGATGGAAAGACAAGAAATGGATTCCATCTATATCATGTTAGCAGAAGACGCCTACATGGATAGGCAAAGGCATTTAGTGACAGAGTGCATTGATTCCATTG
ATGAACAATGTCATACAATTAATGAAGCATTATCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGGAATTAAAACTACAGTTGAAAAAGAAATATTGGAGCACATTAGTATTATGGAGACACCAAAGAAAGCATGGGACACATTTGCCTCACTTTTCTCAAAGAAGAA
TGATGCAAGATTGCAGGTTTTAGAAAACGAGCTCCTGTTAATCGCTCAAAGGGAGATGACTATCAACCATTTCACTAAGGTTGAGAGCATTAGTGGTGAAGAATGGGATG
CAGATCCATACTATGCAACAACAGATCCCGACCCCCAATCGGTATCCAATGTGATGGAGAATAAAGTGTTGGCTCTCCATGTAGACGAGAACTGGAAAGCATGCGTTATG
TGCCTTAATGCAGAAAAATTTGTGCCAATATCTCAATTGACATCAGCAGGCAAATTTTTCGTGTTTGGACCAAATGGTGTTAAGGTTTACCAAGATTTGGAAGCCAGTGG
CAAGCTATTGATGGAAAGACAAGAAATGGATTCCATCTATATCATGTTAGCAGAAGACGCCTACATGGATAGGCAAAGGCATTTAGTGACAGAGTGCATTGATTCCATTG
ATGAACAATGTCATACAATTAATGAAGCATTATCATGAGAGGTCTTTTGAGGAAGGATCCAAAGATGAGATAAGTCGAGTATAACATGATCCAACAGAAGGTGAAGAAGA
AAACGACAAAGACGAAAAACAAT
Protein sequenceShow/hide protein sequence
MFGIKTTVEKEILEHISIMETPKKAWDTFASLFSKKNDARLQVLENELLLIAQREMTINHFTKVESISGEEWDADPYYATTDPDPQSVSNVMENKVLALHVDENWKACVM
CLNAEKFVPISQLTSAGKFFVFGPNGVKVYQDLEASGKLLMERQEMDSIYIMLAEDAYMDRQRHLVTECIDSIDEQCHTINEALS