| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0025917.1 pol protein [Cucumis melo var. makuwa] | 1.2e-176 | 53.85 | Show/hide |
Query: QRFEEGFSRIASPLTQLTRKGTPFVWSPARESSFQDLKQKLITVPVLTVPDGSGSY----------------------------LKSHVQNYPTYDLELA
+RF E FSRIASPLTQLTRKGTPFVWSPA ESSFQ+LKQKL+T PVLTVPDGSGS+ LK+H +NYPT+DLELA
Subjt: QRFEEGFSRIASPLTQLTRKGTPFVWSPARESSFQDLKQKLITVPVLTVPDGSGSY----------------------------LKSHVQNYPTYDLELA
Query: TIVFTLKIWRHYLYAEKIQIFTDYKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHSSKANVVAFAVSRK-----------------------------
+VF LKIWRHYLY EKIQI+TD+KSLKYFFTQKELNMRQRRWLELVKDYDCEILYH KANVVA A+SRK
Subjt: TIVFTLKIWRHYLYAEKIQIFTDYKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHSSKANVVAFAVSRK-----------------------------
Query: ----LAQFSVQPTLRQRIIVAQLNDPYLAKKHYLAEVRTVEEFSISADDGLMFEKRLCVPVDSVVKAELLTETHSSPFSKHPSSTKMYQDLKRVYWWRNI
LAQ +VQPTLRQ+II AQL+DPYLA+K + E EEFSIS+DDGLMFE RLCVP DS VK ELLTE HSSPF+ HP STKMYQDL+ VYWWR +
Subjt: ----LAQFSVQPTLRQRIIVAQLNDPYLAKKHYLAEVRTVEEFSISADDGLMFEKRLCVPVDSVVKAELLTETHSSPFSKHPSSTKMYQDLKRVYWWRNI
Query: KREVADFVSKCLVCQQV-------------------KWENVSMDFISGLLRTLKGYSVIWVIVDRLTKSAHFISEKSTYTA-------------------
KR+VA+FVS+CLVCQQV KWE+VSMDFI+GL +TLKGY+VIWV+VDRLTK+AHF+ KSTYTA
Subjt: KREVADFVSKCLVCQQV-------------------KWENVSMDFISGLLRTLKGYSVIWVIVDRLTKSAHFISEKSTYTA-------------------
Query: -------------ILERMQVAMGTRLDFNTTLHPETDDQTGRLNQILEDM----------------------FSKPYMASV-------------VEPLCV
+ +Q+A+GTRLDF+T HP+TD QT RLNQILEDM ++ Y A++ P+C
Subjt: -------------ILERMQVAMGTRLDFNTTLHPETDDQTGRLNQILEDM----------------------FSKPYMASV-------------VEPLCV
Query: GV----------------------------------------RLDLEFDIVDMVFLKVAPIKDVLRFEKKGKLSPCFVGPFEIFDRIGLVAYRFALPLSL
G R DLEF++ DMVFLKVAP+K VLRFEKKGKLSP FVGPFEI +RIG VAYR ALP SL
Subjt: GV----------------------------------------RLDLEFDIVDMVFLKVAPIKDVLRFEKKGKLSPCFVGPFEIFDRIGLVAYRFALPLSL
Query: FAINDVFHVSMLRKYVADPSHIVDYEPLQINENLSYEQQLVEILEKEVKLLCHIGIALFKVLW
A++DVFHVSMLR+YVADP+HIVD+EPLQ++ENLSYE+Q VEIL +E+K L I L KVLW
Subjt: FAINDVFHVSMLRKYVADPSHIVDYEPLQINENLSYEQQLVEILEKEVKLLCHIGIALFKVLW
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| KAA0035890.1 pol protein [Cucumis melo var. makuwa] | 7.3e-177 | 54.6 | Show/hide |
Query: QRFEEGFSRIASPLTQLTRKGTPFVWSPARESSFQDLKQKLITVPVLTVPDGSGSY----------------------------LKSHVQNYPTYDLELA
+RF E FSRIASPLTQLTRKGTPFVWSPA ESSFQ+LKQKL+T PVLTVPDGSG++ LK H QNYPT+DLELA
Subjt: QRFEEGFSRIASPLTQLTRKGTPFVWSPARESSFQDLKQKLITVPVLTVPDGSGSY----------------------------LKSHVQNYPTYDLELA
Query: TIVFTLKIWRHYLYAEKIQIFTDYKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHSSKANVVAFAVSRK-----------------------------
+VF LKIWRHYLY EKIQI+TD+KSLKYFFTQKELNMRQRRWLELVKDYDCEILYH KANVVA A+SRK
Subjt: TIVFTLKIWRHYLYAEKIQIFTDYKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHSSKANVVAFAVSRK-----------------------------
Query: ----LAQFSVQPTLRQRIIVAQLNDPYLAKKHYLAEVRTVEEFSISADDGLMFEKRLCVPVDSVVKAELLTETHSSPFSKHPSSTKMYQDLKRVYWWRNI
LAQ SVQPTLRQ+II AQLNDPYLA+K + E E+FSIS+DDGLMFE RLCVP DS VK ELLTE HSSPF+ HP STKMYQDL+ VYWWR +
Subjt: ----LAQFSVQPTLRQRIIVAQLNDPYLAKKHYLAEVRTVEEFSISADDGLMFEKRLCVPVDSVVKAELLTETHSSPFSKHPSSTKMYQDLKRVYWWRNI
Query: KREVADFVSKCLVCQQV-------------------KWENVSMDFISGLLRTLKGYSVIWVIVDRLTKSAHFISEKSTYTA-------------------
KREVADFVS+CLVCQQV KWE+VSMDFI+GL +TLKGY+VIWV+VDRLTKSAHF+ KSTYTA
Subjt: KREVADFVSKCLVCQQV-------------------KWENVSMDFISGLLRTLKGYSVIWVIVDRLTKSAHFISEKSTYTA-------------------
Query: --ILER-----------MQVAMGTRLDFNTTLHPETDDQTGRLNQILEDM----------------------FSKPYMASV-------------VEPLCV
I +R +Q+A+GTRLDF+TT HP+TD QT RLNQILEDM ++ Y A++ P+C
Subjt: --ILER-----------MQVAMGTRLDFNTTLHPETDDQTGRLNQILEDM----------------------FSKPYMASV-------------VEPLCV
Query: G---------------------------------------VRL-DLEFDIVDMVFLKVAPIKDVLRFEKKGKLSPCFVGPFEIFDRIGLVAYRFALPLSL
G VR DLEF++ DMVFLKVAP+K VLRF KKGKLSP FVGPFEI +RIG VAYR ALP S
Subjt: G---------------------------------------VRL-DLEFDIVDMVFLKVAPIKDVLRFEKKGKLSPCFVGPFEIFDRIGLVAYRFALPLSL
Query: FAINDVFHVSMLRKYVADPSHIVDYEPLQINENLSYEQQLVEILEKEVKLLCHIGIALFKVLW
A++DVFH+SMLRKYVADP+H+VD+EPLQI+ENLSYE+Q VE+L +EVK L I L K+LW
Subjt: FAINDVFHVSMLRKYVADPSHIVDYEPLQINENLSYEQQLVEILEKEVKLLCHIGIALFKVLW
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| KAA0050009.1 pol protein [Cucumis melo var. makuwa] | 9.5e-177 | 56.42 | Show/hide |
Query: QRFEEGFSRIASPLTQLTRKGTPFVWSPARESSFQDLKQKLITVPVLTVPDGSGSY----------------------------LKSHVQNYPTYDLELA
+RF E FSRIA+PLTQLTRKG PFVWS A E SFQ+LKQKLIT PVLTVPDGSGS+ LKSH QNYPT+DLELA
Subjt: QRFEEGFSRIASPLTQLTRKGTPFVWSPARESSFQDLKQKLITVPVLTVPDGSGSY----------------------------LKSHVQNYPTYDLELA
Query: TIVFTLKIWRHYLYAEKIQIFTDYKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHSSKANVVAFAVSRK-----------------------------
+VF LKIWRHYLY EKIQIFTD+KSLKYFFTQKELNMRQRRWLELVKDYDCEILYH KANVVA A+SRK
Subjt: TIVFTLKIWRHYLYAEKIQIFTDYKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHSSKANVVAFAVSRK-----------------------------
Query: ----LAQFSVQPTLRQRIIVAQLNDPYLAKKHYLAEVRTVEEFSISADDGLMFEKRLCVPVDSVVKAELLTETHSSPFSKHPSSTKMYQDLKRVYWWRNI
LAQ +VQPTLRQRII AQ NDPYL +K LAE FSIS++ GL+FE+RLCVP DS VK ELL+E HSSPFS HP STKMYQDLKRVYWWRN+
Subjt: ----LAQFSVQPTLRQRIIVAQLNDPYLAKKHYLAEVRTVEEFSISADDGLMFEKRLCVPVDSVVKAELLTETHSSPFSKHPSSTKMYQDLKRVYWWRNI
Query: KREVADFVSKCLVCQQV-------------------KWENVSMDFISGLLRTLKGYSVIWVIVDRLTKSAHFISEKSTYTAILERMQVAMGTRLDFNTTL
KREVA+FVSKCLVCQQV KWENVSMDFI+GL RTL+G++VIWV+VDRLTKSAHF+ KSTYTA L Q A GTRLDF+T
Subjt: KREVADFVSKCLVCQQV-------------------KWENVSMDFISGLLRTLKGYSVIWVIVDRLTKSAHFISEKSTYTAILERMQVAMGTRLDFNTTL
Query: HPETDDQTGRLNQILEDM----------------------FSKPYMASV-------------VEPLCVGV------------------------------
HP+TDDQT RLNQ+LEDM ++ Y A++ P+C G
Subjt: HPETDDQTGRLNQILEDM----------------------FSKPYMASV-------------VEPLCVGV------------------------------
Query: ----------RLDLEFDIVDMVFLKVAPIKDVLRFEKKGKLSPCFVGPFEIFDRIGLVAYRFALPLSLFAINDVFHVSMLRKYVADPSHIVDYEPLQINE
R DLEF + D VFLKVAP++ VLRFE+KGKLSP FVGPFEI +RIG VAYR ALP SL ++DVFHVSMLRKYV DPSH+V+YEPL+I+E
Subjt: ----------RLDLEFDIVDMVFLKVAPIKDVLRFEKKGKLSPCFVGPFEIFDRIGLVAYRFALPLSLFAINDVFHVSMLRKYVADPSHIVDYEPLQINE
Query: NLSYEQQLVEILEKEVKLLCHIGIALFKVLW
NLSY +Q VE+L +EVK+L + I L KVLW
Subjt: NLSYEQQLVEILEKEVKLLCHIGIALFKVLW
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| KAA0051051.1 reverse transcriptase [Cucumis melo var. makuwa] | 4.9e-181 | 59.76 | Show/hide |
Query: QRFEEGFSRIASPLTQLTRKGTPFVWSPARESSFQDLKQKLITVPVLTVPDGSGSY----------------------------LKSHVQNYPTYDLELA
+RF E FSRIA+PLTQLTRKG PFVWS A E SFQ+LKQKL+T PVLTVPDGSGS+ LKSH Q YPT+DLELA
Subjt: QRFEEGFSRIASPLTQLTRKGTPFVWSPARESSFQDLKQKLITVPVLTVPDGSGSY----------------------------LKSHVQNYPTYDLELA
Query: TIVFTLKIWRHYLYAEKIQIFTDYKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHSSKANVVAFAVSRKLAQFSVQPTLRQRIIVAQLNDPYLAKKHY
+VF LKIWRHYLY EKIQIFTD+KSLKYFFT KELN+RQRRWLELVKDYDCEILYH KANVVA A+SRKLAQ +VQPTL QRII AQ NDPYL KK
Subjt: TIVFTLKIWRHYLYAEKIQIFTDYKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHSSKANVVAFAVSRKLAQFSVQPTLRQRIIVAQLNDPYLAKKHY
Query: LAEVRTVEEFSISADDGLMFEKRLCVPVDSVVKAELLTETHSSPFSKHPSSTKMYQDLKRVYWWRNIKREVADFVSKCLVCQQV----------------
LAE EFS+S+D GL+FE+RLCVP DS VK ELL+E HSSPFS HP STKMYQDLKRVYWWRN+KREVA+FVS+CLVCQQV
Subjt: LAEVRTVEEFSISADDGLMFEKRLCVPVDSVVKAELLTETHSSPFSKHPSSTKMYQDLKRVYWWRNIKREVADFVSKCLVCQQV----------------
Query: ---KWENVSMDFISGLLRTLKGYSVIWVIVDRLTKSAHFISEKSTYTA--------------------------------ILERMQVAMGTRLDFNTTLH
KWENVSMDFI+GL RTL+G++VIWV+VDRLTKSAHF+ KSTYTA +R+Q AMGTRLDF+T H
Subjt: ---KWENVSMDFISGLLRTLKGYSVIWVIVDRLTKSAHFISEKSTYTA--------------------------------ILERMQVAMGTRLDFNTTLH
Query: PETDDQTGRLNQILEDMF---------------------------------SKPYMA-SVVEPLCVGVRLDLEFDIVDMVFLKVAPIKDVLRFEKKGKLS
P+TD QT RLNQ+LEDM S+ + A S + G R DLEF+I D VFLKVAP++ VLRFE++GKLS
Subjt: PETDDQTGRLNQILEDMF---------------------------------SKPYMA-SVVEPLCVGVRLDLEFDIVDMVFLKVAPIKDVLRFEKKGKLS
Query: PCFVGPFEIFDRIGLVAYRFALPLSLFAINDVFHVSMLRKYVADPSHIVDYEPLQINENLSYEQQLVEILEKEVKLLCHIGIALFKVLW
P FVGPFEI +RIG VAYR ALP SL ++DVFHVSMLRKYV DPSH+VDYEPL+I+ENLSY +Q VE+L +EVK L + I L KVLW
Subjt: PCFVGPFEIFDRIGLVAYRFALPLSLFAINDVFHVSMLRKYVADPSHIVDYEPLQINENLSYEQQLVEILEKEVKLLCHIGIALFKVLW
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| KAA0053234.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] | 1.5e-177 | 56.35 | Show/hide |
Query: QRFEEGFSRIASPLTQLTRKGTPFVWSPARESSFQDLKQKLITVPVLTVPDGSGSY----------------------------LKSHVQNYPTYDLELA
+RF E FSRIA+PLTQLTRKG PFVWS A E SFQ+LKQKL+T PVLTVP+GSGS+ LKSH QNYPT+DLELA
Subjt: QRFEEGFSRIASPLTQLTRKGTPFVWSPARESSFQDLKQKLITVPVLTVPDGSGSY----------------------------LKSHVQNYPTYDLELA
Query: TIVFTLKIWRHYLYAEKIQIFTDYKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHSSKANVVAFAVSRKLAQFSVQPTLRQRIIVAQLNDPYLAKKHY
+VF LKIWRHYLY EKIQIFTD+KSLKYFFTQKELNMRQRRWLELVKDYDCEILYH KANVVA A+SRKLAQ +VQPTLRQRII AQ NDPYL +K
Subjt: TIVFTLKIWRHYLYAEKIQIFTDYKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHSSKANVVAFAVSRKLAQFSVQPTLRQRIIVAQLNDPYLAKKHY
Query: LAEVRTVEEFSISADDGLMFEKRLCVPVDSVVKAELLTETHSSPFSKHPSSTKMYQDLKRVYWWRNIKREVADFVSKCLVCQQV----------------
LAE R EFS+S+D GL+FE+RLCVP D VK ELL+E HSSPFS HP STKMYQDLKRVYWWRN+KREVA+FVSKCLVCQQV
Subjt: LAEVRTVEEFSISADDGLMFEKRLCVPVDSVVKAELLTETHSSPFSKHPSSTKMYQDLKRVYWWRNIKREVADFVSKCLVCQQV----------------
Query: ---KWENVSMDFISGLLRTLKGYSVIWVIVDRLTKSAHFISEKSTYTA--------------------------------ILERMQVAMGTRLDFNTTLH
KWENVSMDFI+GL RTLKG++VIWV+VDRLTKSAHF+ KSTYTA + +Q AMGTRLDF+T H
Subjt: ---KWENVSMDFISGLLRTLKGYSVIWVIVDRLTKSAHFISEKSTYTA--------------------------------ILERMQVAMGTRLDFNTTLH
Query: PETDDQTGRLNQILEDM----------------------FSKPYMASV-------------VEPLC---VGV----------------------------
P+TD QT RLNQ+LEDM ++ Y A++ P+C VG
Subjt: PETDDQTGRLNQILEDM----------------------FSKPYMASV-------------VEPLC---VGV----------------------------
Query: ---------RLDLEFDIVDMVFLKVAPIKDVLRFEKKGKLSPCFVGPFEIFDRIGLVAYRFALPLSLFAINDVFHVSMLRKYVADPSHIVDYEPLQINEN
R DLEF++ D VFLKVAP++ VLRFE++GKLS FVGPFEI +RIG VAYR ALP SL ++DVFHVSMLRKYV DPSH+VDYEPL+I+EN
Subjt: ---------RLDLEFDIVDMVFLKVAPIKDVLRFEKKGKLSPCFVGPFEIFDRIGLVAYRFALPLSLFAINDVFHVSMLRKYVADPSHIVDYEPLQINEN
Query: LSYEQQLVEILEKEVKLLCHIGIALFKVLW
LSY +Q VE+L +EVK L I L KVLW
Subjt: LSYEQQLVEILEKEVKLLCHIGIALFKVLW
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SXW6 Reverse transcriptase | 3.5e-177 | 54.6 | Show/hide |
Query: QRFEEGFSRIASPLTQLTRKGTPFVWSPARESSFQDLKQKLITVPVLTVPDGSGSY----------------------------LKSHVQNYPTYDLELA
+RF E FSRIASPLTQLTRKGTPFVWSPA ESSFQ+LKQKL+T PVLTVPDGSG++ LK H QNYPT+DLELA
Subjt: QRFEEGFSRIASPLTQLTRKGTPFVWSPARESSFQDLKQKLITVPVLTVPDGSGSY----------------------------LKSHVQNYPTYDLELA
Query: TIVFTLKIWRHYLYAEKIQIFTDYKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHSSKANVVAFAVSRK-----------------------------
+VF LKIWRHYLY EKIQI+TD+KSLKYFFTQKELNMRQRRWLELVKDYDCEILYH KANVVA A+SRK
Subjt: TIVFTLKIWRHYLYAEKIQIFTDYKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHSSKANVVAFAVSRK-----------------------------
Query: ----LAQFSVQPTLRQRIIVAQLNDPYLAKKHYLAEVRTVEEFSISADDGLMFEKRLCVPVDSVVKAELLTETHSSPFSKHPSSTKMYQDLKRVYWWRNI
LAQ SVQPTLRQ+II AQLNDPYLA+K + E E+FSIS+DDGLMFE RLCVP DS VK ELLTE HSSPF+ HP STKMYQDL+ VYWWR +
Subjt: ----LAQFSVQPTLRQRIIVAQLNDPYLAKKHYLAEVRTVEEFSISADDGLMFEKRLCVPVDSVVKAELLTETHSSPFSKHPSSTKMYQDLKRVYWWRNI
Query: KREVADFVSKCLVCQQV-------------------KWENVSMDFISGLLRTLKGYSVIWVIVDRLTKSAHFISEKSTYTA-------------------
KREVADFVS+CLVCQQV KWE+VSMDFI+GL +TLKGY+VIWV+VDRLTKSAHF+ KSTYTA
Subjt: KREVADFVSKCLVCQQV-------------------KWENVSMDFISGLLRTLKGYSVIWVIVDRLTKSAHFISEKSTYTA-------------------
Query: --ILER-----------MQVAMGTRLDFNTTLHPETDDQTGRLNQILEDM----------------------FSKPYMASV-------------VEPLCV
I +R +Q+A+GTRLDF+TT HP+TD QT RLNQILEDM ++ Y A++ P+C
Subjt: --ILER-----------MQVAMGTRLDFNTTLHPETDDQTGRLNQILEDM----------------------FSKPYMASV-------------VEPLCV
Query: G---------------------------------------VRL-DLEFDIVDMVFLKVAPIKDVLRFEKKGKLSPCFVGPFEIFDRIGLVAYRFALPLSL
G VR DLEF++ DMVFLKVAP+K VLRF KKGKLSP FVGPFEI +RIG VAYR ALP S
Subjt: G---------------------------------------VRL-DLEFDIVDMVFLKVAPIKDVLRFEKKGKLSPCFVGPFEIFDRIGLVAYRFALPLSL
Query: FAINDVFHVSMLRKYVADPSHIVDYEPLQINENLSYEQQLVEILEKEVKLLCHIGIALFKVLW
A++DVFH+SMLRKYVADP+H+VD+EPLQI+ENLSYE+Q VE+L +EVK L I L K+LW
Subjt: FAINDVFHVSMLRKYVADPSHIVDYEPLQINENLSYEQQLVEILEKEVKLLCHIGIALFKVLW
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| A0A5A7TP01 Reverse transcriptase | 6.0e-177 | 53.85 | Show/hide |
Query: QRFEEGFSRIASPLTQLTRKGTPFVWSPARESSFQDLKQKLITVPVLTVPDGSGSY----------------------------LKSHVQNYPTYDLELA
+RF E FSRIASPLTQLTRKGTPFVWSPA ESSFQ+LKQKL+T PVLTVPDGSGS+ LK+H +NYPT+DLELA
Subjt: QRFEEGFSRIASPLTQLTRKGTPFVWSPARESSFQDLKQKLITVPVLTVPDGSGSY----------------------------LKSHVQNYPTYDLELA
Query: TIVFTLKIWRHYLYAEKIQIFTDYKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHSSKANVVAFAVSRK-----------------------------
+VF LKIWRHYLY EKIQI+TD+KSLKYFFTQKELNMRQRRWLELVKDYDCEILYH KANVVA A+SRK
Subjt: TIVFTLKIWRHYLYAEKIQIFTDYKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHSSKANVVAFAVSRK-----------------------------
Query: ----LAQFSVQPTLRQRIIVAQLNDPYLAKKHYLAEVRTVEEFSISADDGLMFEKRLCVPVDSVVKAELLTETHSSPFSKHPSSTKMYQDLKRVYWWRNI
LAQ +VQPTLRQ+II AQL+DPYLA+K + E EEFSIS+DDGLMFE RLCVP DS VK ELLTE HSSPF+ HP STKMYQDL+ VYWWR +
Subjt: ----LAQFSVQPTLRQRIIVAQLNDPYLAKKHYLAEVRTVEEFSISADDGLMFEKRLCVPVDSVVKAELLTETHSSPFSKHPSSTKMYQDLKRVYWWRNI
Query: KREVADFVSKCLVCQQV-------------------KWENVSMDFISGLLRTLKGYSVIWVIVDRLTKSAHFISEKSTYTA-------------------
KR+VA+FVS+CLVCQQV KWE+VSMDFI+GL +TLKGY+VIWV+VDRLTK+AHF+ KSTYTA
Subjt: KREVADFVSKCLVCQQV-------------------KWENVSMDFISGLLRTLKGYSVIWVIVDRLTKSAHFISEKSTYTA-------------------
Query: -------------ILERMQVAMGTRLDFNTTLHPETDDQTGRLNQILEDM----------------------FSKPYMASV-------------VEPLCV
+ +Q+A+GTRLDF+T HP+TD QT RLNQILEDM ++ Y A++ P+C
Subjt: -------------ILERMQVAMGTRLDFNTTLHPETDDQTGRLNQILEDM----------------------FSKPYMASV-------------VEPLCV
Query: GV----------------------------------------RLDLEFDIVDMVFLKVAPIKDVLRFEKKGKLSPCFVGPFEIFDRIGLVAYRFALPLSL
G R DLEF++ DMVFLKVAP+K VLRFEKKGKLSP FVGPFEI +RIG VAYR ALP SL
Subjt: GV----------------------------------------RLDLEFDIVDMVFLKVAPIKDVLRFEKKGKLSPCFVGPFEIFDRIGLVAYRFALPLSL
Query: FAINDVFHVSMLRKYVADPSHIVDYEPLQINENLSYEQQLVEILEKEVKLLCHIGIALFKVLW
A++DVFHVSMLR+YVADP+HIVD+EPLQ++ENLSYE+Q VEIL +E+K L I L KVLW
Subjt: FAINDVFHVSMLRKYVADPSHIVDYEPLQINENLSYEQQLVEILEKEVKLLCHIGIALFKVLW
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| A0A5A7U943 Pol protein | 4.6e-177 | 56.42 | Show/hide |
Query: QRFEEGFSRIASPLTQLTRKGTPFVWSPARESSFQDLKQKLITVPVLTVPDGSGSY----------------------------LKSHVQNYPTYDLELA
+RF E FSRIA+PLTQLTRKG PFVWS A E SFQ+LKQKLIT PVLTVPDGSGS+ LKSH QNYPT+DLELA
Subjt: QRFEEGFSRIASPLTQLTRKGTPFVWSPARESSFQDLKQKLITVPVLTVPDGSGSY----------------------------LKSHVQNYPTYDLELA
Query: TIVFTLKIWRHYLYAEKIQIFTDYKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHSSKANVVAFAVSRK-----------------------------
+VF LKIWRHYLY EKIQIFTD+KSLKYFFTQKELNMRQRRWLELVKDYDCEILYH KANVVA A+SRK
Subjt: TIVFTLKIWRHYLYAEKIQIFTDYKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHSSKANVVAFAVSRK-----------------------------
Query: ----LAQFSVQPTLRQRIIVAQLNDPYLAKKHYLAEVRTVEEFSISADDGLMFEKRLCVPVDSVVKAELLTETHSSPFSKHPSSTKMYQDLKRVYWWRNI
LAQ +VQPTLRQRII AQ NDPYL +K LAE FSIS++ GL+FE+RLCVP DS VK ELL+E HSSPFS HP STKMYQDLKRVYWWRN+
Subjt: ----LAQFSVQPTLRQRIIVAQLNDPYLAKKHYLAEVRTVEEFSISADDGLMFEKRLCVPVDSVVKAELLTETHSSPFSKHPSSTKMYQDLKRVYWWRNI
Query: KREVADFVSKCLVCQQV-------------------KWENVSMDFISGLLRTLKGYSVIWVIVDRLTKSAHFISEKSTYTAILERMQVAMGTRLDFNTTL
KREVA+FVSKCLVCQQV KWENVSMDFI+GL RTL+G++VIWV+VDRLTKSAHF+ KSTYTA L Q A GTRLDF+T
Subjt: KREVADFVSKCLVCQQV-------------------KWENVSMDFISGLLRTLKGYSVIWVIVDRLTKSAHFISEKSTYTAILERMQVAMGTRLDFNTTL
Query: HPETDDQTGRLNQILEDM----------------------FSKPYMASV-------------VEPLCVGV------------------------------
HP+TDDQT RLNQ+LEDM ++ Y A++ P+C G
Subjt: HPETDDQTGRLNQILEDM----------------------FSKPYMASV-------------VEPLCVGV------------------------------
Query: ----------RLDLEFDIVDMVFLKVAPIKDVLRFEKKGKLSPCFVGPFEIFDRIGLVAYRFALPLSLFAINDVFHVSMLRKYVADPSHIVDYEPLQINE
R DLEF + D VFLKVAP++ VLRFE+KGKLSP FVGPFEI +RIG VAYR ALP SL ++DVFHVSMLRKYV DPSH+V+YEPL+I+E
Subjt: ----------RLDLEFDIVDMVFLKVAPIKDVLRFEKKGKLSPCFVGPFEIFDRIGLVAYRFALPLSLFAINDVFHVSMLRKYVADPSHIVDYEPLQINE
Query: NLSYEQQLVEILEKEVKLLCHIGIALFKVLW
NLSY +Q VE+L +EVK+L + I L KVLW
Subjt: NLSYEQQLVEILEKEVKLLCHIGIALFKVLW
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| A0A5A7UC07 Reverse transcriptase | 2.4e-181 | 59.76 | Show/hide |
Query: QRFEEGFSRIASPLTQLTRKGTPFVWSPARESSFQDLKQKLITVPVLTVPDGSGSY----------------------------LKSHVQNYPTYDLELA
+RF E FSRIA+PLTQLTRKG PFVWS A E SFQ+LKQKL+T PVLTVPDGSGS+ LKSH Q YPT+DLELA
Subjt: QRFEEGFSRIASPLTQLTRKGTPFVWSPARESSFQDLKQKLITVPVLTVPDGSGSY----------------------------LKSHVQNYPTYDLELA
Query: TIVFTLKIWRHYLYAEKIQIFTDYKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHSSKANVVAFAVSRKLAQFSVQPTLRQRIIVAQLNDPYLAKKHY
+VF LKIWRHYLY EKIQIFTD+KSLKYFFT KELN+RQRRWLELVKDYDCEILYH KANVVA A+SRKLAQ +VQPTL QRII AQ NDPYL KK
Subjt: TIVFTLKIWRHYLYAEKIQIFTDYKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHSSKANVVAFAVSRKLAQFSVQPTLRQRIIVAQLNDPYLAKKHY
Query: LAEVRTVEEFSISADDGLMFEKRLCVPVDSVVKAELLTETHSSPFSKHPSSTKMYQDLKRVYWWRNIKREVADFVSKCLVCQQV----------------
LAE EFS+S+D GL+FE+RLCVP DS VK ELL+E HSSPFS HP STKMYQDLKRVYWWRN+KREVA+FVS+CLVCQQV
Subjt: LAEVRTVEEFSISADDGLMFEKRLCVPVDSVVKAELLTETHSSPFSKHPSSTKMYQDLKRVYWWRNIKREVADFVSKCLVCQQV----------------
Query: ---KWENVSMDFISGLLRTLKGYSVIWVIVDRLTKSAHFISEKSTYTA--------------------------------ILERMQVAMGTRLDFNTTLH
KWENVSMDFI+GL RTL+G++VIWV+VDRLTKSAHF+ KSTYTA +R+Q AMGTRLDF+T H
Subjt: ---KWENVSMDFISGLLRTLKGYSVIWVIVDRLTKSAHFISEKSTYTA--------------------------------ILERMQVAMGTRLDFNTTLH
Query: PETDDQTGRLNQILEDMF---------------------------------SKPYMA-SVVEPLCVGVRLDLEFDIVDMVFLKVAPIKDVLRFEKKGKLS
P+TD QT RLNQ+LEDM S+ + A S + G R DLEF+I D VFLKVAP++ VLRFE++GKLS
Subjt: PETDDQTGRLNQILEDMF---------------------------------SKPYMA-SVVEPLCVGVRLDLEFDIVDMVFLKVAPIKDVLRFEKKGKLS
Query: PCFVGPFEIFDRIGLVAYRFALPLSLFAINDVFHVSMLRKYVADPSHIVDYEPLQINENLSYEQQLVEILEKEVKLLCHIGIALFKVLW
P FVGPFEI +RIG VAYR ALP SL ++DVFHVSMLRKYV DPSH+VDYEPL+I+ENLSY +Q VE+L +EVK L + I L KVLW
Subjt: PCFVGPFEIFDRIGLVAYRFALPLSLFAINDVFHVSMLRKYVADPSHIVDYEPLQINENLSYEQQLVEILEKEVKLLCHIGIALFKVLW
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| A0A5A7UDB1 Reverse transcriptase | 7.1e-178 | 56.35 | Show/hide |
Query: QRFEEGFSRIASPLTQLTRKGTPFVWSPARESSFQDLKQKLITVPVLTVPDGSGSY----------------------------LKSHVQNYPTYDLELA
+RF E FSRIA+PLTQLTRKG PFVWS A E SFQ+LKQKL+T PVLTVP+GSGS+ LKSH QNYPT+DLELA
Subjt: QRFEEGFSRIASPLTQLTRKGTPFVWSPARESSFQDLKQKLITVPVLTVPDGSGSY----------------------------LKSHVQNYPTYDLELA
Query: TIVFTLKIWRHYLYAEKIQIFTDYKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHSSKANVVAFAVSRKLAQFSVQPTLRQRIIVAQLNDPYLAKKHY
+VF LKIWRHYLY EKIQIFTD+KSLKYFFTQKELNMRQRRWLELVKDYDCEILYH KANVVA A+SRKLAQ +VQPTLRQRII AQ NDPYL +K
Subjt: TIVFTLKIWRHYLYAEKIQIFTDYKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHSSKANVVAFAVSRKLAQFSVQPTLRQRIIVAQLNDPYLAKKHY
Query: LAEVRTVEEFSISADDGLMFEKRLCVPVDSVVKAELLTETHSSPFSKHPSSTKMYQDLKRVYWWRNIKREVADFVSKCLVCQQV----------------
LAE R EFS+S+D GL+FE+RLCVP D VK ELL+E HSSPFS HP STKMYQDLKRVYWWRN+KREVA+FVSKCLVCQQV
Subjt: LAEVRTVEEFSISADDGLMFEKRLCVPVDSVVKAELLTETHSSPFSKHPSSTKMYQDLKRVYWWRNIKREVADFVSKCLVCQQV----------------
Query: ---KWENVSMDFISGLLRTLKGYSVIWVIVDRLTKSAHFISEKSTYTA--------------------------------ILERMQVAMGTRLDFNTTLH
KWENVSMDFI+GL RTLKG++VIWV+VDRLTKSAHF+ KSTYTA + +Q AMGTRLDF+T H
Subjt: ---KWENVSMDFISGLLRTLKGYSVIWVIVDRLTKSAHFISEKSTYTA--------------------------------ILERMQVAMGTRLDFNTTLH
Query: PETDDQTGRLNQILEDM----------------------FSKPYMASV-------------VEPLC---VGV----------------------------
P+TD QT RLNQ+LEDM ++ Y A++ P+C VG
Subjt: PETDDQTGRLNQILEDM----------------------FSKPYMASV-------------VEPLC---VGV----------------------------
Query: ---------RLDLEFDIVDMVFLKVAPIKDVLRFEKKGKLSPCFVGPFEIFDRIGLVAYRFALPLSLFAINDVFHVSMLRKYVADPSHIVDYEPLQINEN
R DLEF++ D VFLKVAP++ VLRFE++GKLS FVGPFEI +RIG VAYR ALP SL ++DVFHVSMLRKYV DPSH+VDYEPL+I+EN
Subjt: ---------RLDLEFDIVDMVFLKVAPIKDVLRFEKKGKLSPCFVGPFEIFDRIGLVAYRFALPLSLFAINDVFHVSMLRKYVADPSHIVDYEPLQINEN
Query: LSYEQQLVEILEKEVKLLCHIGIALFKVLW
LSY +Q VE+L +EVK L I L KVLW
Subjt: LSYEQQLVEILEKEVKLLCHIGIALFKVLW
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| SwissProt top hits | e value | %identity | Alignment |
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| P0CT34 Transposon Tf2-1 polyprotein | 1.5e-23 | 24 | Show/hide |
Query: LDLLQRFEEGFSRIASPLTQLTRKGTPFVWSPARESSFQDLKQKLITVPVLT--------------------------------VPDGSGSYLKSHVQ-N
++ L++F S++ PL L +K + W+P + + +++KQ L++ PVL P G S S Q N
Subjt: LDLLQRFEEGFSRIASPLTQLTRKGTPFVWSPARESSFQDLKQKLITVPVLT--------------------------------VPDGSGSYLKSHVQ-N
Query: YPTYDLELATIVFTLKIWRHYLYA--EKIQIFTDYKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHSSKANVVAFAVSR-----------------
Y D E+ I+ +LK WRHYL + E +I TD+++L T + N R RW ++D++ EI Y AN +A A+SR
Subjt: YPTYDLELATIVFTLKIWRHYLYA--EKIQIFTDYKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHSSKANVVAFAVSR-----------------
Query: -KLAQFSVQPTLRQRIIVAQLNDPYLAKKHYLAEVRTVEEFSISADDGLMFEKR--LCVPVDSVVKAELLTETHSSPFSKHPSSTKMYQDLKRVYWWRNI
+ Q S+ + +++ ND L E + VEE +I DGL+ + + +P D+ + ++ + H HP + + R + W+ I
Subjt: -KLAQFSVQPTLRQRIIVAQLNDPYLAKKHYLAEVRTVEEFSISADDGLMFEKR--LCVPVDSVVKAELLTETHSSPFSKHPSSTKMYQDLKRVYWWRNI
Query: KREVADFVSKCLVCQQVK-------------------WENVSMDFISGLLRTLKGYSVIWVIVDRLTKSA------HFISEKSTYTAILERMQVAMGTR-
++++ ++V C CQ K WE++SMDFI+ L + GY+ ++V+VDR +K A I+ + T +R+ G
Subjt: KREVADFVSKCLVCQQVK-------------------WENVSMDFISGLLRTLKGYSVIWVIVDRLTKSA------HFISEKSTYTAILERMQVAMGTR-
Query: -------------------------LDFNTTLHPETDDQTGRLNQILEDM
+ F+ P+TD QT R NQ +E +
Subjt: -------------------------LDFNTTLHPETDDQTGRLNQILEDM
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| P0CT35 Transposon Tf2-2 polyprotein | 1.5e-23 | 24 | Show/hide |
Query: LDLLQRFEEGFSRIASPLTQLTRKGTPFVWSPARESSFQDLKQKLITVPVLT--------------------------------VPDGSGSYLKSHVQ-N
++ L++F S++ PL L +K + W+P + + +++KQ L++ PVL P G S S Q N
Subjt: LDLLQRFEEGFSRIASPLTQLTRKGTPFVWSPARESSFQDLKQKLITVPVLT--------------------------------VPDGSGSYLKSHVQ-N
Query: YPTYDLELATIVFTLKIWRHYLYA--EKIQIFTDYKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHSSKANVVAFAVSR-----------------
Y D E+ I+ +LK WRHYL + E +I TD+++L T + N R RW ++D++ EI Y AN +A A+SR
Subjt: YPTYDLELATIVFTLKIWRHYLYA--EKIQIFTDYKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHSSKANVVAFAVSR-----------------
Query: -KLAQFSVQPTLRQRIIVAQLNDPYLAKKHYLAEVRTVEEFSISADDGLMFEKR--LCVPVDSVVKAELLTETHSSPFSKHPSSTKMYQDLKRVYWWRNI
+ Q S+ + +++ ND L E + VEE +I DGL+ + + +P D+ + ++ + H HP + + R + W+ I
Subjt: -KLAQFSVQPTLRQRIIVAQLNDPYLAKKHYLAEVRTVEEFSISADDGLMFEKR--LCVPVDSVVKAELLTETHSSPFSKHPSSTKMYQDLKRVYWWRNI
Query: KREVADFVSKCLVCQQVK-------------------WENVSMDFISGLLRTLKGYSVIWVIVDRLTKSA------HFISEKSTYTAILERMQVAMGTR-
++++ ++V C CQ K WE++SMDFI+ L + GY+ ++V+VDR +K A I+ + T +R+ G
Subjt: KREVADFVSKCLVCQQVK-------------------WENVSMDFISGLLRTLKGYSVIWVIVDRLTKSA------HFISEKSTYTAILERMQVAMGTR-
Query: -------------------------LDFNTTLHPETDDQTGRLNQILEDM
+ F+ P+TD QT R NQ +E +
Subjt: -------------------------LDFNTTLHPETDDQTGRLNQILEDM
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| P0CT36 Transposon Tf2-3 polyprotein | 1.5e-23 | 24 | Show/hide |
Query: LDLLQRFEEGFSRIASPLTQLTRKGTPFVWSPARESSFQDLKQKLITVPVLT--------------------------------VPDGSGSYLKSHVQ-N
++ L++F S++ PL L +K + W+P + + +++KQ L++ PVL P G S S Q N
Subjt: LDLLQRFEEGFSRIASPLTQLTRKGTPFVWSPARESSFQDLKQKLITVPVLT--------------------------------VPDGSGSYLKSHVQ-N
Query: YPTYDLELATIVFTLKIWRHYLYA--EKIQIFTDYKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHSSKANVVAFAVSR-----------------
Y D E+ I+ +LK WRHYL + E +I TD+++L T + N R RW ++D++ EI Y AN +A A+SR
Subjt: YPTYDLELATIVFTLKIWRHYLYA--EKIQIFTDYKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHSSKANVVAFAVSR-----------------
Query: -KLAQFSVQPTLRQRIIVAQLNDPYLAKKHYLAEVRTVEEFSISADDGLMFEKR--LCVPVDSVVKAELLTETHSSPFSKHPSSTKMYQDLKRVYWWRNI
+ Q S+ + +++ ND L E + VEE +I DGL+ + + +P D+ + ++ + H HP + + R + W+ I
Subjt: -KLAQFSVQPTLRQRIIVAQLNDPYLAKKHYLAEVRTVEEFSISADDGLMFEKR--LCVPVDSVVKAELLTETHSSPFSKHPSSTKMYQDLKRVYWWRNI
Query: KREVADFVSKCLVCQQVK-------------------WENVSMDFISGLLRTLKGYSVIWVIVDRLTKSA------HFISEKSTYTAILERMQVAMGTR-
++++ ++V C CQ K WE++SMDFI+ L + GY+ ++V+VDR +K A I+ + T +R+ G
Subjt: KREVADFVSKCLVCQQVK-------------------WENVSMDFISGLLRTLKGYSVIWVIVDRLTKSA------HFISEKSTYTAILERMQVAMGTR-
Query: -------------------------LDFNTTLHPETDDQTGRLNQILEDM
+ F+ P+TD QT R NQ +E +
Subjt: -------------------------LDFNTTLHPETDDQTGRLNQILEDM
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| P0CT41 Transposon Tf2-12 polyprotein | 1.5e-23 | 24 | Show/hide |
Query: LDLLQRFEEGFSRIASPLTQLTRKGTPFVWSPARESSFQDLKQKLITVPVLT--------------------------------VPDGSGSYLKSHVQ-N
++ L++F S++ PL L +K + W+P + + +++KQ L++ PVL P G S S Q N
Subjt: LDLLQRFEEGFSRIASPLTQLTRKGTPFVWSPARESSFQDLKQKLITVPVLT--------------------------------VPDGSGSYLKSHVQ-N
Query: YPTYDLELATIVFTLKIWRHYLYA--EKIQIFTDYKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHSSKANVVAFAVSR-----------------
Y D E+ I+ +LK WRHYL + E +I TD+++L T + N R RW ++D++ EI Y AN +A A+SR
Subjt: YPTYDLELATIVFTLKIWRHYLYA--EKIQIFTDYKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHSSKANVVAFAVSR-----------------
Query: -KLAQFSVQPTLRQRIIVAQLNDPYLAKKHYLAEVRTVEEFSISADDGLMFEKR--LCVPVDSVVKAELLTETHSSPFSKHPSSTKMYQDLKRVYWWRNI
+ Q S+ + +++ ND L E + VEE +I DGL+ + + +P D+ + ++ + H HP + + R + W+ I
Subjt: -KLAQFSVQPTLRQRIIVAQLNDPYLAKKHYLAEVRTVEEFSISADDGLMFEKR--LCVPVDSVVKAELLTETHSSPFSKHPSSTKMYQDLKRVYWWRNI
Query: KREVADFVSKCLVCQQVK-------------------WENVSMDFISGLLRTLKGYSVIWVIVDRLTKSA------HFISEKSTYTAILERMQVAMGTR-
++++ ++V C CQ K WE++SMDFI+ L + GY+ ++V+VDR +K A I+ + T +R+ G
Subjt: KREVADFVSKCLVCQQVK-------------------WENVSMDFISGLLRTLKGYSVIWVIVDRLTKSA------HFISEKSTYTAILERMQVAMGTR-
Query: -------------------------LDFNTTLHPETDDQTGRLNQILEDM
+ F+ P+TD QT R NQ +E +
Subjt: -------------------------LDFNTTLHPETDDQTGRLNQILEDM
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| Q9UR07 Transposon Tf2-11 polyprotein | 1.5e-23 | 24 | Show/hide |
Query: LDLLQRFEEGFSRIASPLTQLTRKGTPFVWSPARESSFQDLKQKLITVPVLT--------------------------------VPDGSGSYLKSHVQ-N
++ L++F S++ PL L +K + W+P + + +++KQ L++ PVL P G S S Q N
Subjt: LDLLQRFEEGFSRIASPLTQLTRKGTPFVWSPARESSFQDLKQKLITVPVLT--------------------------------VPDGSGSYLKSHVQ-N
Query: YPTYDLELATIVFTLKIWRHYLYA--EKIQIFTDYKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHSSKANVVAFAVSR-----------------
Y D E+ I+ +LK WRHYL + E +I TD+++L T + N R RW ++D++ EI Y AN +A A+SR
Subjt: YPTYDLELATIVFTLKIWRHYLYA--EKIQIFTDYKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHSSKANVVAFAVSR-----------------
Query: -KLAQFSVQPTLRQRIIVAQLNDPYLAKKHYLAEVRTVEEFSISADDGLMFEKR--LCVPVDSVVKAELLTETHSSPFSKHPSSTKMYQDLKRVYWWRNI
+ Q S+ + +++ ND L E + VEE +I DGL+ + + +P D+ + ++ + H HP + + R + W+ I
Subjt: -KLAQFSVQPTLRQRIIVAQLNDPYLAKKHYLAEVRTVEEFSISADDGLMFEKR--LCVPVDSVVKAELLTETHSSPFSKHPSSTKMYQDLKRVYWWRNI
Query: KREVADFVSKCLVCQQVK-------------------WENVSMDFISGLLRTLKGYSVIWVIVDRLTKSA------HFISEKSTYTAILERMQVAMGTR-
++++ ++V C CQ K WE++SMDFI+ L + GY+ ++V+VDR +K A I+ + T +R+ G
Subjt: KREVADFVSKCLVCQQVK-------------------WENVSMDFISGLLRTLKGYSVIWVIVDRLTKSA------HFISEKSTYTAILERMQVAMGTR-
Query: -------------------------LDFNTTLHPETDDQTGRLNQILEDM
+ F+ P+TD QT R NQ +E +
Subjt: -------------------------LDFNTTLHPETDDQTGRLNQILEDM
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