| GenBank top hits | e value | %identity | Alignment |
|---|
| AAO72413.1 gag-pol polyprotein [Oryza sativa Japonica Group] | 2.4e-193 | 52.11 | Show/hide |
Query: GRKPHLAHLRVFGCVAYVKTTTPHLKKLDDRSSPVVYFGVEEGCKAHRLYDPGREKLQISRDVVFQENLEWPWNEVVSDGKEITEFQVMDQFCSDEFENL
G+KPHL HLRVFGC A+ K T PHLKKLDDRS+PVVY GVEEG KAHRL+DP R ++ +SRDVVF EN W W+ + TEF+V + +++
Subjt: GRKPHLAHLRVFGCVAYVKTTTPHLKKLDDRSSPVVYFGVEEGCKAHRLYDPGREKLQISRDVVFQENLEWPWNEVVSDGKEITEFQVMDQFCSDEFENL
Query: EDAET----RVENVIPHATEIPAIGATGPSPP----------------------------------STNTPVRLRSLTHIYINTEEV-VGGDEQENEKLL
E A + R A + P + +PP S + PVR RSL I I V + D+ + E LL
Subjt: EDAET----RVENVIPHATEIPAIGATGPSPP----------------------------------STNTPVRLRSLTHIYINTEEV-VGGDEQENEKLL
Query: -------------KRPNWYKVMENELKSIEKNNTWSLTKLPPGHKPIGLKWVFKLKKDPSVEVVKHNARLVAK------GIDFEEVLAPVARLDTVRVIL
P W M EL++IEKN TWSL LP HK IGLKWVFKLKK+ + EV+KH ARLVAK G+DF+EV APVARLDTVR IL
Subjt: -------------KRPNWYKVMENELKSIEKNNTWSLTKLPPGHKPIGLKWVFKLKKDPSVEVVKHNARLVAK------GIDFEEVLAPVARLDTVRVIL
Query: VLVANQSWEVHHLDVKSTFLNGELEEEVYVTQSEGFEVPNKKHKVHRLSKALYGLRQAPRAWNIQLDRSLKELGFGKCTQKQVVYTRSEGEECVLVEVYV
+ ++ W+VHHLDVKS FLNG+LEEEVYV+Q EGF K+H V++LSKALYGLRQAPRAWN +LDRS+KELGF +C Q+Q VYTR G ++V VYV
Subjt: VLVANQSWEVHHLDVKSTFLNGELEEEVYVTQSEGFEVPNKKHKVHRLSKALYGLRQAPRAWNIQLDRSLKELGFGKCTQKQVVYTRSEGEECVLVEVYV
Query: DNLIVAGNSTEKVNKFKQQMMAEFEMSHLGLLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATKYPMEPKAQLHKDMEGAPIEATEYRNIVGC
D+LIV G S + FKQQMM EFEMS LGLL+YYLGIE LHKD +G+ ++ TEYR ++GC
Subjt: DNLIVAGNSTEKVNKFKQQMMAEFEMSHLGLLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATKYPMEPKAQLHKDMEGAPIEATEYRNIVGC
Query: LRYLLNTRPNLSYVFGMASKYMERPTTIHYKVVKQILRYLRGTIHFGLTYTKGPRQFDILGYSDSDLVSDLDGRKSTSGMKFYLNESLVSWNSQKQKTVT
LRYLL+TRP+LSY G+AS++MERPT +H+K VKQILRYL+GTI+ GL ++ G +I G++DSDL D D R+STSGM FY N SLVSW+SQKQKTV
Subjt: LRYLLNTRPNLSYVFGMASKYMERPTTIHYKVVKQILRYLRGTIHFGLTYTKGPRQFDILGYSDSDLVSDLDGRKSTSGMKFYLNESLVSWNSQKQKTVT
Query: LSSCKAEFIAATTAACQALWLRCIVSEIVRMEPRSVTLFVDNKSAIALMKNPVFHGCGKHIDTCFHFIQECVENGQIIVEFVNTREQRADVLTKALTRVK
LSSC+AEF+AAT AAC ALWLR ++ E++ E R V L+VDNKSAIALMKNPVFHG KHIDT +HFI+ECVE+G+I +EFV EQRAD LTK L +
Subjt: LSSCKAEFIAATTAACQALWLRCIVSEIVRMEPRSVTLFVDNKSAIALMKNPVFHGCGKHIDTCFHFIQECVENGQIIVEFVNTREQRADVLTKALTRVK
Query: LAAMCQLLGVRN
LA LLGVR+
Subjt: LAAMCQLLGVRN
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| ABF94034.1 retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] | 2.0e-216 | 54.85 | Show/hide |
Query: GRKPHLAHLRVFGCVAYVKTTTPHLKKLDDRSSPVVYFGVEEGCKAHRLYDPGREKLQISRDVVFQENLEWPWNEVVSDGKEITEFQVMDQFCSDEFENL
GRKP L HL+VFGC A+ K T PHLKKLDDRS+P VY GVEEG KAHRL+DP R ++ +SRDVVF+EN+ W W G+E T+F + + + E L
Subjt: GRKPHLAHLRVFGCVAYVKTTTPHLKKLDDRSSPVVYFGVEEGCKAHRLYDPGREKLQISRDVVFQENLEWPWNEVVSDGKEITEFQVMDQFCSDEFENL
Query: EDAETRVENVIPH----------------ATEIPA-----------IGATGPSPPSTNT------------------PVRLRSLTHIYINTEEV-VGGDE
T V P+ A E+P+ G P PSTN+ P R RSL + V + DE
Subjt: EDAETRVENVIPH----------------ATEIPA-----------IGATGPSPPSTNT------------------PVRLRSLTHIYINTEEV-VGGDE
Query: QENEKLLK-------------RPNWYKVMENELKSIEKNNTWSLTKLPPGHKPIGLKWVFKLKKDPSVEVVKHNARLVAK------GIDFEEVLAPVARL
+ E LL +P W + M+ E+++IEKN TW L LP GH+ IGLKWV+KLKK+ + E++KH ARLVAK G+DFEEV APVARL
Subjt: QENEKLLK-------------RPNWYKVMENELKSIEKNNTWSLTKLPPGHKPIGLKWVFKLKKDPSVEVVKHNARLVAK------GIDFEEVLAPVARL
Query: DTVRVILVLVANQSWEVHHLDVKSTFLNGELEEEVYVTQSEGFEVPNKKHKVHRLSKALYGLRQAPRAWNIQLDRSLKELGFGKCTQKQVVYTRSEGEEC
DTVRV+L + A++ W+VHHLDVKS FLNGELEEEVYV Q EGF K+H V +L KALYGLRQAPRAWNI+LDRSL+ELGF +CTQ+Q VYTR G +
Subjt: DTVRVILVLVANQSWEVHHLDVKSTFLNGELEEEVYVTQSEGFEVPNKKHKVHRLSKALYGLRQAPRAWNIQLDRSLKELGFGKCTQKQVVYTRSEGEEC
Query: VLVEVYVDNLIVAGNSTEKVNKFKQQMMAEFEMSHLGLLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATKYPMEPKAQLHKDMEGAPIEATE
++V VYVD+LIV G + ++ FK+QMM EFEMS LGLL+YYLGIEV+Q + LKQ YAK++LSQFGM +CN+ P++P++QL KD EG P++ATE
Subjt: VLVEVYVDNLIVAGNSTEKVNKFKQQMMAEFEMSHLGLLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATKYPMEPKAQLHKDMEGAPIEATE
Query: YRNIVGCLRYLLNTRPNLSYVFGMASKYMERPTTIHYKVVKQILRYLRGTIHFGLTYTKGPRQFDILGYSDSDLVSDLDGRKSTSGMKFYLNESLVSWNS
YR I+G LRYLL+TRP+LSY G+AS++MERPT +H+K VKQILRY++GT+ +GL Y G I GY+DSDL DLD R+ST GM FY+N+SLV+W+S
Subjt: YRNIVGCLRYLLNTRPNLSYVFGMASKYMERPTTIHYKVVKQILRYLRGTIHFGLTYTKGPRQFDILGYSDSDLVSDLDGRKSTSGMKFYLNESLVSWNS
Query: QKQKTVTLSSCKAEFIAATTAACQALWLRCIVSEIVRMEPRSVTLFVDNKSAIALMKNPVFHGCGKHIDTCFHFIQECVENGQIIVEFVNTREQRADVLT
QKQKTV LSSC+AEF+AATTAACQALWLR +++E+ +E ++V LFVDN+SAIALMKNPVFHG KHIDT +HFI+ECV+ GQI+VEFV T EQRAD LT
Subjt: QKQKTVTLSSCKAEFIAATTAACQALWLRCIVSEIVRMEPRSVTLFVDNKSAIALMKNPVFHGCGKHIDTCFHFIQECVENGQIIVEFVNTREQRADVLT
Query: KALTRVKLAAMCQLLGVRNLES
K L KL LLGVR+L S
Subjt: KALTRVKLAAMCQLLGVRNLES
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| EEC84282.1 hypothetical protein OsI_30754 [Oryza sativa Indica Group] | 4.1e-217 | 56.66 | Show/hide |
Query: GRKPHLAHLRVFGCVAYVKTTTPHLKKLDDRSSPVVYFGVEEGCKAHRLYDPGREKLQISRDVVFQENLEWPWNEVVSDGKEITEFQVMDQFCS------
GRKP L HLRVFGC+A+ K TTP+ KKLDDRS+P VY GVEEG KAHRL+DP ++ +SRDV+F+EN+ W W+ VV+ + TEF V +
Subjt: GRKPHLAHLRVFGCVAYVKTTTPHLKKLDDRSSPVVYFGVEEGCKAHRLYDPGREKLQISRDVVFQENLEWPWNEVVSDGKEITEFQVMDQFCS------
Query: ------------------------DEFENLEDAETRVENVIPHATEIPAIGATGP--SPPSTNT------PVRLRSLTHIYINTEEV-VGGDEQENEKLL
+L + + P +T PA G+ GP SP S+ PVR RSL I V + DE + + LL
Subjt: ------------------------DEFENLEDAETRVENVIPHATEIPAIGATGP--SPPSTNT------PVRLRSLTHIYINTEEV-VGGDEQENEKLL
Query: K-------------RPNWYKVMENELKSIEKNNTWSLTKLPPGHKPIGLKWVFKLKKDPSVEVVKHNARLVAK------GIDFEEVLAPVARLDTVRVIL
+P W M EL++IEKN+TW+LT LP GHKPIGLKWV+KLKK+ + EV+KH ARLVAK G+DFEEV APVARLDTVRVIL
Subjt: K-------------RPNWYKVMENELKSIEKNNTWSLTKLPPGHKPIGLKWVFKLKKDPSVEVVKHNARLVAK------GIDFEEVLAPVARLDTVRVIL
Query: VLVANQSWEVHHLDVKSTFLNGELEEEVYVTQSEGFEVPNKKHKVHRLSKALYGLRQAPRAWNIQLDRSLKELGFGKCTQKQVVYTRSEGEECVLVEVYV
+ A++ WEVHHLDVKS FLNG+LEEEVYV Q EGF ++H V RLSKALYGLRQAPRAWN +LD+ LKELGF +CTQ+Q VYTR +G+ V+V VYV
Subjt: VLVANQSWEVHHLDVKSTFLNGELEEEVYVTQSEGFEVPNKKHKVHRLSKALYGLRQAPRAWNIQLDRSLKELGFGKCTQKQVVYTRSEGEECVLVEVYV
Query: DNLIVAGNSTEKVNKFKQQMMAEFEMSHLGLLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATKYPMEPKAQLHKDMEGAPIEATEYRNIVGC
D+LIV G + +++ FKQQMM EFEMS LGLLSYYLGIEV Q + I +KQ YAK+ILSQFGM CN T PMEP++ LHKD +G PI+ATEYR ++GC
Subjt: DNLIVAGNSTEKVNKFKQQMMAEFEMSHLGLLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATKYPMEPKAQLHKDMEGAPIEATEYRNIVGC
Query: LRYLLNTRPNLSYVFGMASKYMERPTTIHYKVVKQILRYLRGTIHFGLTYTKGPRQFDILGYSDSDLVSDLDGRKSTSGMKFYLNESLVSWNSQKQKTVT
LRYLL+TRP+LSY G+AS++MERPTT+H K VK ILRYL+GT+ GL + G DI G++DSDL D+D R+ST GM FY+N SLVSW SQKQKTV
Subjt: LRYLLNTRPNLSYVFGMASKYMERPTTIHYKVVKQILRYLRGTIHFGLTYTKGPRQFDILGYSDSDLVSDLDGRKSTSGMKFYLNESLVSWNSQKQKTVT
Query: LSSCKAEFIAATTAACQALWLRCIVSEIVRMEPRSVTLFVDNKSAIALMKNPVFHGCGKHIDTCFHFIQECVENGQIIVEFVNTREQRADVLTKALTRVK
LSSC+AEF+AAT AAC ALWLR ++SE++ E + V LFVDNKSAIALMKNPVFHG KHIDT +HFI+ECVE+GQI++EFV++ EQRAD +TK L K
Subjt: LSSCKAEFIAATTAACQALWLRCIVSEIVRMEPRSVTLFVDNKSAIALMKNPVFHGCGKHIDTCFHFIQECVENGQIIVEFVNTREQRADVLTKALTRVK
Query: LAAMCQLLGVRNL
LA LLGVR+L
Subjt: LAAMCQLLGVRNL
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| KAB8107251.1 hypothetical protein EE612_041900 [Oryza sativa] | 1.5e-216 | 56.66 | Show/hide |
Query: GRKPHLAHLRVFGCVAYVKTTTPHLKKLDDRSSPVVYFGVEEGCKAHRLYDPGREKLQISRDVVFQENLEWPWNEVVSDGKEITEFQVMDQFCS------
GRKP L HLRVFGC+A+ K TTP+ KKLDDRS+P VY GVEEG KAHRL+DP ++ +SRDV+F+EN+ W W+ VV+ + TEF V +
Subjt: GRKPHLAHLRVFGCVAYVKTTTPHLKKLDDRSSPVVYFGVEEGCKAHRLYDPGREKLQISRDVVFQENLEWPWNEVVSDGKEITEFQVMDQFCS------
Query: ------------------------DEFENLEDAETRVENVIPHATEIPAIGATGP--SP------PSTNTPVRLRSLTHIYINTEEV-VGGDEQENEKLL
+L + + P +T PA G+ GP SP S PVR RSL I V + DE + + LL
Subjt: ------------------------DEFENLEDAETRVENVIPHATEIPAIGATGP--SP------PSTNTPVRLRSLTHIYINTEEV-VGGDEQENEKLL
Query: K-------------RPNWYKVMENELKSIEKNNTWSLTKLPPGHKPIGLKWVFKLKKDPSVEVVKHNARLVAK------GIDFEEVLAPVARLDTVRVIL
+P W M EL++IEKN+TW+LT LP GHKPIGLKWV+KLKK+ + EV+KH ARLVAK G+DFEEV APVARLDTVRVIL
Subjt: K-------------RPNWYKVMENELKSIEKNNTWSLTKLPPGHKPIGLKWVFKLKKDPSVEVVKHNARLVAK------GIDFEEVLAPVARLDTVRVIL
Query: VLVANQSWEVHHLDVKSTFLNGELEEEVYVTQSEGFEVPNKKHKVHRLSKALYGLRQAPRAWNIQLDRSLKELGFGKCTQKQVVYTRSEGEECVLVEVYV
+ A++ WEVHHLDVKS FLNG+LEEEVYV Q EGF ++H V RLSKALYGLRQAPRAWN +LD+ LKELGF +CTQ+Q VYTR +G+ V+V VYV
Subjt: VLVANQSWEVHHLDVKSTFLNGELEEEVYVTQSEGFEVPNKKHKVHRLSKALYGLRQAPRAWNIQLDRSLKELGFGKCTQKQVVYTRSEGEECVLVEVYV
Query: DNLIVAGNSTEKVNKFKQQMMAEFEMSHLGLLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATKYPMEPKAQLHKDMEGAPIEATEYRNIVGC
D+LIV G + ++ FKQQMM EFEMS LGLLSYYLGIEV Q + I +KQ YAK+ILSQFGM CN T PMEP++ LHKD +G PI+ATEYR ++GC
Subjt: DNLIVAGNSTEKVNKFKQQMMAEFEMSHLGLLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATKYPMEPKAQLHKDMEGAPIEATEYRNIVGC
Query: LRYLLNTRPNLSYVFGMASKYMERPTTIHYKVVKQILRYLRGTIHFGLTYTKGPRQFDILGYSDSDLVSDLDGRKSTSGMKFYLNESLVSWNSQKQKTVT
LRYLL+TRP+LSY G+AS++MERPTT+H K VK ILRYL+GT+ GL + G DI G++DSDL D+D R+ST GM FY+N SLVSW SQKQKTV
Subjt: LRYLLNTRPNLSYVFGMASKYMERPTTIHYKVVKQILRYLRGTIHFGLTYTKGPRQFDILGYSDSDLVSDLDGRKSTSGMKFYLNESLVSWNSQKQKTVT
Query: LSSCKAEFIAATTAACQALWLRCIVSEIVRMEPRSVTLFVDNKSAIALMKNPVFHGCGKHIDTCFHFIQECVENGQIIVEFVNTREQRADVLTKALTRVK
LSSC+AEF+AAT AAC ALWLR ++SE++ E + V LFVDNKSAIALMKNPVFHG KHIDT +HFI+ECVE+GQI++EFV + EQRAD +TK L K
Subjt: LSSCKAEFIAATTAACQALWLRCIVSEIVRMEPRSVTLFVDNKSAIALMKNPVFHGCGKHIDTCFHFIQECVENGQIIVEFVNTREQRADVLTKALTRVK
Query: LAAMCQLLGVRNL
LA LLGVR+L
Subjt: LAAMCQLLGVRNL
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| KAG6523193.1 hypothetical protein ZIOFF_013046 [Zingiber officinale] | 3.5e-192 | 55.59 | Show/hide |
Query: MGRKPHLAHLRVFGCVAYVKTTTPHLKKLDDRSSPVVYFGVEEGCKAHRLYDPGREKLQISRDVVFQENLEWPWNEVVSDGKEITEFQVMDQFCSDEFEN
MGRKPHLAHLRVFGCVAYVK TTPHLKKLDDRSSP+VY GVEEGCKAHRL+DP +KLQ+SRDVVFQEN EW W + + + EF V D +DE
Subjt: MGRKPHLAHLRVFGCVAYVKTTTPHLKKLDDRSSPVVYFGVEEGCKAHRLYDPGREKLQISRDVVFQENLEWPWNEVVSDGKEITEFQVMDQFCSDEFEN
Query: LEDAETRVENVIPHATE-IPAIGATGPSPPSTNT-----------PVRLRSLTHIYINTEEVVGGDEQENEKLLKRPNWYKVMENELKSIEKNNTWSLTK
+ D E E+V P AT +P GA+ PS S++T PVR RS+ IY NTEEVVG DE+ENE +L
Subjt: LEDAETRVENVIPHATE-IPAIGATGPSPPSTNT-----------PVRLRSLTHIYINTEEVVGGDEQENEKLLKRPNWYKVMENELKSIEKNNTWSLTK
Query: LPPGHKPIGLKWVFKLKKDPSVEVVKHNARLVAKGIDFEEVLAPVARLDTVRVILVLVANQSWEVHHLDVKSTFLNGELEEEVYVTQSEGFEVPNKKHKV
+ EE Q E
Subjt: LPPGHKPIGLKWVFKLKKDPSVEVVKHNARLVAKGIDFEEVLAPVARLDTVRVILVLVANQSWEVHHLDVKSTFLNGELEEEVYVTQSEGFEVPNKKHKV
Query: HRLSKALYGLRQAPRAWNIQLDRSLKELGFGKCTQKQVVYTRSEGEECVLVEVYVDNLIVAGNSTEKVNKFKQQMMAEFEMSHLGLLSYYLGIEVEQQKG
L ELGF KC Q+ VYTR EGE +LV VYVD+LIV G+ST ++NKFKQQMM EFEMS LGLLSYYLGIEVEQQK
Subjt: HRLSKALYGLRQAPRAWNIQLDRSLKELGFGKCTQKQVVYTRSEGEECVLVEVYVDNLIVAGNSTEKVNKFKQQMMAEFEMSHLGLLSYYLGIEVEQQKG
Query: RILLKQPTYAKRILSQFGMADCNATKYPMEPKAQLHKDMEGAPIEATEYRNIVGCLRYLLNTRPNLSYVFGMASKYMERPTTIHYKVVKQILRYLRGTIH
RILL+Q TYAK+ILSQF MADCNATK+PMEPK QLHKD+EG P++ATEY+ ++GCLRYLL+TRP+LSY GMAS+YMERPTT+H+KVVKQILRYL+G IH
Subjt: RILLKQPTYAKRILSQFGMADCNATKYPMEPKAQLHKDMEGAPIEATEYRNIVGCLRYLLNTRPNLSYVFGMASKYMERPTTIHYKVVKQILRYLRGTIH
Query: FGLTYTKGPRQFDILGYSDSDLVSDLDGRKSTSGMKFYLNESLVSWNSQKQKTVTLSSCKAEFIAATTAACQALWLRCIVSEIVRMEPRSVTLFVDNKSA
FGLTY KGP++ I GYSDSDL DLDGRKSTSGM FY NESLVSWNSQKQKTV LSSC+AEF+AATTAAC ALWLR + SE+ +P+ VTLFVDNKSA
Subjt: FGLTYTKGPRQFDILGYSDSDLVSDLDGRKSTSGMKFYLNESLVSWNSQKQKTVTLSSCKAEFIAATTAACQALWLRCIVSEIVRMEPRSVTLFVDNKSA
Query: IALMKNPVFHGCGKHIDTCFHFIQECVENGQIIVEFVNTREQRADVLTKALTRVKLAAMCQLLGVRNLESC
IALMKNPVFHG K+IDT FHFI+ECVENGQI+VEF+NT EQRADVLTKAL VKL M QLLGVR+LE C
Subjt: IALMKNPVFHGCGKHIDTCFHFIQECVENGQIIVEFVNTREQRADVLTKALTRVKLAAMCQLLGVRNLESC
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0P0XB91 Os08g0125300 protein | 7.5e-217 | 56.66 | Show/hide |
Query: GRKPHLAHLRVFGCVAYVKTTTPHLKKLDDRSSPVVYFGVEEGCKAHRLYDPGREKLQISRDVVFQENLEWPWNEVVSDGKEITEFQVMDQFCS------
GRKP L HLRVFGC+A+ K TTP+ KKLDDRS+P VY GVEEG KAHRL+DP ++ +SRDV+F+EN+ W W+ VV+ + TEF V +
Subjt: GRKPHLAHLRVFGCVAYVKTTTPHLKKLDDRSSPVVYFGVEEGCKAHRLYDPGREKLQISRDVVFQENLEWPWNEVVSDGKEITEFQVMDQFCS------
Query: ------------------------DEFENLEDAETRVENVIPHATEIPAIGATGP--SP------PSTNTPVRLRSLTHIYINTEEV-VGGDEQENEKLL
+L + + P +T PA G+ GP SP S PVR RSL I V + DE + + LL
Subjt: ------------------------DEFENLEDAETRVENVIPHATEIPAIGATGP--SP------PSTNTPVRLRSLTHIYINTEEV-VGGDEQENEKLL
Query: K-------------RPNWYKVMENELKSIEKNNTWSLTKLPPGHKPIGLKWVFKLKKDPSVEVVKHNARLVAK------GIDFEEVLAPVARLDTVRVIL
+P W M EL++IEKN+TW+LT LP GHKPIGLKWV+KLKK+ + EV+KH ARLVAK G+DFEEV APVARLDTVRVIL
Subjt: K-------------RPNWYKVMENELKSIEKNNTWSLTKLPPGHKPIGLKWVFKLKKDPSVEVVKHNARLVAK------GIDFEEVLAPVARLDTVRVIL
Query: VLVANQSWEVHHLDVKSTFLNGELEEEVYVTQSEGFEVPNKKHKVHRLSKALYGLRQAPRAWNIQLDRSLKELGFGKCTQKQVVYTRSEGEECVLVEVYV
+ A++ WEVHHLDVKS FLNG+LEEEVYV Q EGF ++H V RLSKALYGLRQAPRAWN +LD+ LKELGF +CTQ+Q VYTR +G+ V+V VYV
Subjt: VLVANQSWEVHHLDVKSTFLNGELEEEVYVTQSEGFEVPNKKHKVHRLSKALYGLRQAPRAWNIQLDRSLKELGFGKCTQKQVVYTRSEGEECVLVEVYV
Query: DNLIVAGNSTEKVNKFKQQMMAEFEMSHLGLLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATKYPMEPKAQLHKDMEGAPIEATEYRNIVGC
D+LIV G + ++ FKQQMM EFEMS LGLLSYYLGIEV Q + I +KQ YAK+ILSQFGM CN T PMEP++ LHKD +G PI+ATEYR ++GC
Subjt: DNLIVAGNSTEKVNKFKQQMMAEFEMSHLGLLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATKYPMEPKAQLHKDMEGAPIEATEYRNIVGC
Query: LRYLLNTRPNLSYVFGMASKYMERPTTIHYKVVKQILRYLRGTIHFGLTYTKGPRQFDILGYSDSDLVSDLDGRKSTSGMKFYLNESLVSWNSQKQKTVT
LRYLL+TRP+LSY G+AS++MERPTT+H K VK ILRYL+GT+ GL + G DI G++DSDL D+D R+ST GM FY+N SLVSW SQKQKTV
Subjt: LRYLLNTRPNLSYVFGMASKYMERPTTIHYKVVKQILRYLRGTIHFGLTYTKGPRQFDILGYSDSDLVSDLDGRKSTSGMKFYLNESLVSWNSQKQKTVT
Query: LSSCKAEFIAATTAACQALWLRCIVSEIVRMEPRSVTLFVDNKSAIALMKNPVFHGCGKHIDTCFHFIQECVENGQIIVEFVNTREQRADVLTKALTRVK
LSSC+AEF+AAT AAC ALWLR ++SE++ E + V LFVDNKSAIALMKNPVFHG KHIDT +HFI+ECVE+GQI++EFV + EQRAD +TK L K
Subjt: LSSCKAEFIAATTAACQALWLRCIVSEIVRMEPRSVTLFVDNKSAIALMKNPVFHGCGKHIDTCFHFIQECVENGQIIVEFVNTREQRADVLTKALTRVK
Query: LAAMCQLLGVRNL
LA LLGVR+L
Subjt: LAAMCQLLGVRNL
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| B8BDZ6 Uncharacterized protein | 2.0e-217 | 56.66 | Show/hide |
Query: GRKPHLAHLRVFGCVAYVKTTTPHLKKLDDRSSPVVYFGVEEGCKAHRLYDPGREKLQISRDVVFQENLEWPWNEVVSDGKEITEFQVMDQFCS------
GRKP L HLRVFGC+A+ K TTP+ KKLDDRS+P VY GVEEG KAHRL+DP ++ +SRDV+F+EN+ W W+ VV+ + TEF V +
Subjt: GRKPHLAHLRVFGCVAYVKTTTPHLKKLDDRSSPVVYFGVEEGCKAHRLYDPGREKLQISRDVVFQENLEWPWNEVVSDGKEITEFQVMDQFCS------
Query: ------------------------DEFENLEDAETRVENVIPHATEIPAIGATGP--SPPSTNT------PVRLRSLTHIYINTEEV-VGGDEQENEKLL
+L + + P +T PA G+ GP SP S+ PVR RSL I V + DE + + LL
Subjt: ------------------------DEFENLEDAETRVENVIPHATEIPAIGATGP--SPPSTNT------PVRLRSLTHIYINTEEV-VGGDEQENEKLL
Query: K-------------RPNWYKVMENELKSIEKNNTWSLTKLPPGHKPIGLKWVFKLKKDPSVEVVKHNARLVAK------GIDFEEVLAPVARLDTVRVIL
+P W M EL++IEKN+TW+LT LP GHKPIGLKWV+KLKK+ + EV+KH ARLVAK G+DFEEV APVARLDTVRVIL
Subjt: K-------------RPNWYKVMENELKSIEKNNTWSLTKLPPGHKPIGLKWVFKLKKDPSVEVVKHNARLVAK------GIDFEEVLAPVARLDTVRVIL
Query: VLVANQSWEVHHLDVKSTFLNGELEEEVYVTQSEGFEVPNKKHKVHRLSKALYGLRQAPRAWNIQLDRSLKELGFGKCTQKQVVYTRSEGEECVLVEVYV
+ A++ WEVHHLDVKS FLNG+LEEEVYV Q EGF ++H V RLSKALYGLRQAPRAWN +LD+ LKELGF +CTQ+Q VYTR +G+ V+V VYV
Subjt: VLVANQSWEVHHLDVKSTFLNGELEEEVYVTQSEGFEVPNKKHKVHRLSKALYGLRQAPRAWNIQLDRSLKELGFGKCTQKQVVYTRSEGEECVLVEVYV
Query: DNLIVAGNSTEKVNKFKQQMMAEFEMSHLGLLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATKYPMEPKAQLHKDMEGAPIEATEYRNIVGC
D+LIV G + +++ FKQQMM EFEMS LGLLSYYLGIEV Q + I +KQ YAK+ILSQFGM CN T PMEP++ LHKD +G PI+ATEYR ++GC
Subjt: DNLIVAGNSTEKVNKFKQQMMAEFEMSHLGLLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATKYPMEPKAQLHKDMEGAPIEATEYRNIVGC
Query: LRYLLNTRPNLSYVFGMASKYMERPTTIHYKVVKQILRYLRGTIHFGLTYTKGPRQFDILGYSDSDLVSDLDGRKSTSGMKFYLNESLVSWNSQKQKTVT
LRYLL+TRP+LSY G+AS++MERPTT+H K VK ILRYL+GT+ GL + G DI G++DSDL D+D R+ST GM FY+N SLVSW SQKQKTV
Subjt: LRYLLNTRPNLSYVFGMASKYMERPTTIHYKVVKQILRYLRGTIHFGLTYTKGPRQFDILGYSDSDLVSDLDGRKSTSGMKFYLNESLVSWNSQKQKTVT
Query: LSSCKAEFIAATTAACQALWLRCIVSEIVRMEPRSVTLFVDNKSAIALMKNPVFHGCGKHIDTCFHFIQECVENGQIIVEFVNTREQRADVLTKALTRVK
LSSC+AEF+AAT AAC ALWLR ++SE++ E + V LFVDNKSAIALMKNPVFHG KHIDT +HFI+ECVE+GQI++EFV++ EQRAD +TK L K
Subjt: LSSCKAEFIAATTAACQALWLRCIVSEIVRMEPRSVTLFVDNKSAIALMKNPVFHGCGKHIDTCFHFIQECVENGQIIVEFVNTREQRADVLTKALTRVK
Query: LAAMCQLLGVRNL
LA LLGVR+L
Subjt: LAAMCQLLGVRNL
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| Q0J8A6 Os08g0125300 protein | 7.5e-217 | 56.66 | Show/hide |
Query: GRKPHLAHLRVFGCVAYVKTTTPHLKKLDDRSSPVVYFGVEEGCKAHRLYDPGREKLQISRDVVFQENLEWPWNEVVSDGKEITEFQVMDQFCS------
GRKP L HLRVFGC+A+ K TTP+ KKLDDRS+P VY GVEEG KAHRL+DP ++ +SRDV+F+EN+ W W+ VV+ + TEF V +
Subjt: GRKPHLAHLRVFGCVAYVKTTTPHLKKLDDRSSPVVYFGVEEGCKAHRLYDPGREKLQISRDVVFQENLEWPWNEVVSDGKEITEFQVMDQFCS------
Query: ------------------------DEFENLEDAETRVENVIPHATEIPAIGATGP--SP------PSTNTPVRLRSLTHIYINTEEV-VGGDEQENEKLL
+L + + P +T PA G+ GP SP S PVR RSL I V + DE + + LL
Subjt: ------------------------DEFENLEDAETRVENVIPHATEIPAIGATGP--SP------PSTNTPVRLRSLTHIYINTEEV-VGGDEQENEKLL
Query: K-------------RPNWYKVMENELKSIEKNNTWSLTKLPPGHKPIGLKWVFKLKKDPSVEVVKHNARLVAK------GIDFEEVLAPVARLDTVRVIL
+P W M EL++IEKN+TW+LT LP GHKPIGLKWV+KLKK+ + EV+KH ARLVAK G+DFEEV APVARLDTVRVIL
Subjt: K-------------RPNWYKVMENELKSIEKNNTWSLTKLPPGHKPIGLKWVFKLKKDPSVEVVKHNARLVAK------GIDFEEVLAPVARLDTVRVIL
Query: VLVANQSWEVHHLDVKSTFLNGELEEEVYVTQSEGFEVPNKKHKVHRLSKALYGLRQAPRAWNIQLDRSLKELGFGKCTQKQVVYTRSEGEECVLVEVYV
+ A++ WEVHHLDVKS FLNG+LEEEVYV Q EGF ++H V RLSKALYGLRQAPRAWN +LD+ LKELGF +CTQ+Q VYTR +G+ V+V VYV
Subjt: VLVANQSWEVHHLDVKSTFLNGELEEEVYVTQSEGFEVPNKKHKVHRLSKALYGLRQAPRAWNIQLDRSLKELGFGKCTQKQVVYTRSEGEECVLVEVYV
Query: DNLIVAGNSTEKVNKFKQQMMAEFEMSHLGLLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATKYPMEPKAQLHKDMEGAPIEATEYRNIVGC
D+LIV G + ++ FKQQMM EFEMS LGLLSYYLGIEV Q + I +KQ YAK+ILSQFGM CN T PMEP++ LHKD +G PI+ATEYR ++GC
Subjt: DNLIVAGNSTEKVNKFKQQMMAEFEMSHLGLLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATKYPMEPKAQLHKDMEGAPIEATEYRNIVGC
Query: LRYLLNTRPNLSYVFGMASKYMERPTTIHYKVVKQILRYLRGTIHFGLTYTKGPRQFDILGYSDSDLVSDLDGRKSTSGMKFYLNESLVSWNSQKQKTVT
LRYLL+TRP+LSY G+AS++MERPTT+H K VK ILRYL+GT+ GL + G DI G++DSDL D+D R+ST GM FY+N SLVSW SQKQKTV
Subjt: LRYLLNTRPNLSYVFGMASKYMERPTTIHYKVVKQILRYLRGTIHFGLTYTKGPRQFDILGYSDSDLVSDLDGRKSTSGMKFYLNESLVSWNSQKQKTVT
Query: LSSCKAEFIAATTAACQALWLRCIVSEIVRMEPRSVTLFVDNKSAIALMKNPVFHGCGKHIDTCFHFIQECVENGQIIVEFVNTREQRADVLTKALTRVK
LSSC+AEF+AAT AAC ALWLR ++SE++ E + V LFVDNKSAIALMKNPVFHG KHIDT +HFI+ECVE+GQI++EFV + EQRAD +TK L K
Subjt: LSSCKAEFIAATTAACQALWLRCIVSEIVRMEPRSVTLFVDNKSAIALMKNPVFHGCGKHIDTCFHFIQECVENGQIIVEFVNTREQRADVLTKALTRVK
Query: LAAMCQLLGVRNL
LA LLGVR+L
Subjt: LAAMCQLLGVRNL
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| Q10F84 Gag-pol polyprotein | 1.2e-193 | 52.11 | Show/hide |
Query: GRKPHLAHLRVFGCVAYVKTTTPHLKKLDDRSSPVVYFGVEEGCKAHRLYDPGREKLQISRDVVFQENLEWPWNEVVSDGKEITEFQVMDQFCSDEFENL
G+KPHL HLRVFGC A+ K T PHLKKLDDRS+PVVY GVEEG KAHRL+DP R ++ +SRDVVF EN W W+ + TEF+V + +++
Subjt: GRKPHLAHLRVFGCVAYVKTTTPHLKKLDDRSSPVVYFGVEEGCKAHRLYDPGREKLQISRDVVFQENLEWPWNEVVSDGKEITEFQVMDQFCSDEFENL
Query: EDAET----RVENVIPHATEIPAIGATGPSPP----------------------------------STNTPVRLRSLTHIYINTEEV-VGGDEQENEKLL
E A + R A + P + +PP S + PVR RSL I I V + D+ + E LL
Subjt: EDAET----RVENVIPHATEIPAIGATGPSPP----------------------------------STNTPVRLRSLTHIYINTEEV-VGGDEQENEKLL
Query: -------------KRPNWYKVMENELKSIEKNNTWSLTKLPPGHKPIGLKWVFKLKKDPSVEVVKHNARLVAK------GIDFEEVLAPVARLDTVRVIL
P W M EL++IEKN TWSL LP HK IGLKWVFKLKK+ + EV+KH ARLVAK G+DF+EV APVARLDTVR IL
Subjt: -------------KRPNWYKVMENELKSIEKNNTWSLTKLPPGHKPIGLKWVFKLKKDPSVEVVKHNARLVAK------GIDFEEVLAPVARLDTVRVIL
Query: VLVANQSWEVHHLDVKSTFLNGELEEEVYVTQSEGFEVPNKKHKVHRLSKALYGLRQAPRAWNIQLDRSLKELGFGKCTQKQVVYTRSEGEECVLVEVYV
+ ++ W+VHHLDVKS FLNG+LEEEVYV+Q EGF K+H V++LSKALYGLRQAPRAWN +LDRS+KELGF +C Q+Q VYTR G ++V VYV
Subjt: VLVANQSWEVHHLDVKSTFLNGELEEEVYVTQSEGFEVPNKKHKVHRLSKALYGLRQAPRAWNIQLDRSLKELGFGKCTQKQVVYTRSEGEECVLVEVYV
Query: DNLIVAGNSTEKVNKFKQQMMAEFEMSHLGLLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATKYPMEPKAQLHKDMEGAPIEATEYRNIVGC
D+LIV G S + FKQQMM EFEMS LGLL+YYLGIE LHKD +G+ ++ TEYR ++GC
Subjt: DNLIVAGNSTEKVNKFKQQMMAEFEMSHLGLLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATKYPMEPKAQLHKDMEGAPIEATEYRNIVGC
Query: LRYLLNTRPNLSYVFGMASKYMERPTTIHYKVVKQILRYLRGTIHFGLTYTKGPRQFDILGYSDSDLVSDLDGRKSTSGMKFYLNESLVSWNSQKQKTVT
LRYLL+TRP+LSY G+AS++MERPT +H+K VKQILRYL+GTI+ GL ++ G +I G++DSDL D D R+STSGM FY N SLVSW+SQKQKTV
Subjt: LRYLLNTRPNLSYVFGMASKYMERPTTIHYKVVKQILRYLRGTIHFGLTYTKGPRQFDILGYSDSDLVSDLDGRKSTSGMKFYLNESLVSWNSQKQKTVT
Query: LSSCKAEFIAATTAACQALWLRCIVSEIVRMEPRSVTLFVDNKSAIALMKNPVFHGCGKHIDTCFHFIQECVENGQIIVEFVNTREQRADVLTKALTRVK
LSSC+AEF+AAT AAC ALWLR ++ E++ E R V L+VDNKSAIALMKNPVFHG KHIDT +HFI+ECVE+G+I +EFV EQRAD LTK L +
Subjt: LSSCKAEFIAATTAACQALWLRCIVSEIVRMEPRSVTLFVDNKSAIALMKNPVFHGCGKHIDTCFHFIQECVENGQIIVEFVNTREQRADVLTKALTRVK
Query: LAAMCQLLGVRN
LA LLGVR+
Subjt: LAAMCQLLGVRN
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| Q10RM4 Retrotransposon protein, putative, unclassified | 9.8e-217 | 54.85 | Show/hide |
Query: GRKPHLAHLRVFGCVAYVKTTTPHLKKLDDRSSPVVYFGVEEGCKAHRLYDPGREKLQISRDVVFQENLEWPWNEVVSDGKEITEFQVMDQFCSDEFENL
GRKP L HL+VFGC A+ K T PHLKKLDDRS+P VY GVEEG KAHRL+DP R ++ +SRDVVF+EN+ W W G+E T+F + + + E L
Subjt: GRKPHLAHLRVFGCVAYVKTTTPHLKKLDDRSSPVVYFGVEEGCKAHRLYDPGREKLQISRDVVFQENLEWPWNEVVSDGKEITEFQVMDQFCSDEFENL
Query: EDAETRVENVIPH----------------ATEIPA-----------IGATGPSPPSTNT------------------PVRLRSLTHIYINTEEV-VGGDE
T V P+ A E+P+ G P PSTN+ P R RSL + V + DE
Subjt: EDAETRVENVIPH----------------ATEIPA-----------IGATGPSPPSTNT------------------PVRLRSLTHIYINTEEV-VGGDE
Query: QENEKLLK-------------RPNWYKVMENELKSIEKNNTWSLTKLPPGHKPIGLKWVFKLKKDPSVEVVKHNARLVAK------GIDFEEVLAPVARL
+ E LL +P W + M+ E+++IEKN TW L LP GH+ IGLKWV+KLKK+ + E++KH ARLVAK G+DFEEV APVARL
Subjt: QENEKLLK-------------RPNWYKVMENELKSIEKNNTWSLTKLPPGHKPIGLKWVFKLKKDPSVEVVKHNARLVAK------GIDFEEVLAPVARL
Query: DTVRVILVLVANQSWEVHHLDVKSTFLNGELEEEVYVTQSEGFEVPNKKHKVHRLSKALYGLRQAPRAWNIQLDRSLKELGFGKCTQKQVVYTRSEGEEC
DTVRV+L + A++ W+VHHLDVKS FLNGELEEEVYV Q EGF K+H V +L KALYGLRQAPRAWNI+LDRSL+ELGF +CTQ+Q VYTR G +
Subjt: DTVRVILVLVANQSWEVHHLDVKSTFLNGELEEEVYVTQSEGFEVPNKKHKVHRLSKALYGLRQAPRAWNIQLDRSLKELGFGKCTQKQVVYTRSEGEEC
Query: VLVEVYVDNLIVAGNSTEKVNKFKQQMMAEFEMSHLGLLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATKYPMEPKAQLHKDMEGAPIEATE
++V VYVD+LIV G + ++ FK+QMM EFEMS LGLL+YYLGIEV+Q + LKQ YAK++LSQFGM +CN+ P++P++QL KD EG P++ATE
Subjt: VLVEVYVDNLIVAGNSTEKVNKFKQQMMAEFEMSHLGLLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATKYPMEPKAQLHKDMEGAPIEATE
Query: YRNIVGCLRYLLNTRPNLSYVFGMASKYMERPTTIHYKVVKQILRYLRGTIHFGLTYTKGPRQFDILGYSDSDLVSDLDGRKSTSGMKFYLNESLVSWNS
YR I+G LRYLL+TRP+LSY G+AS++MERPT +H+K VKQILRY++GT+ +GL Y G I GY+DSDL DLD R+ST GM FY+N+SLV+W+S
Subjt: YRNIVGCLRYLLNTRPNLSYVFGMASKYMERPTTIHYKVVKQILRYLRGTIHFGLTYTKGPRQFDILGYSDSDLVSDLDGRKSTSGMKFYLNESLVSWNS
Query: QKQKTVTLSSCKAEFIAATTAACQALWLRCIVSEIVRMEPRSVTLFVDNKSAIALMKNPVFHGCGKHIDTCFHFIQECVENGQIIVEFVNTREQRADVLT
QKQKTV LSSC+AEF+AATTAACQALWLR +++E+ +E ++V LFVDN+SAIALMKNPVFHG KHIDT +HFI+ECV+ GQI+VEFV T EQRAD LT
Subjt: QKQKTVTLSSCKAEFIAATTAACQALWLRCIVSEIVRMEPRSVTLFVDNKSAIALMKNPVFHGCGKHIDTCFHFIQECVENGQIIVEFVNTREQRADVLT
Query: KALTRVKLAAMCQLLGVRNLES
K L KL LLGVR+L S
Subjt: KALTRVKLAAMCQLLGVRNLES
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 7.7e-86 | 29.26 | Show/hide |
Query: RKPHLAHLRVFGCVAYVKTTTPHLK----KLDDRSSPVVYFGVEEGCKAHRLYDPGREKLQISRDVVF-----------------------QENLEWPWN
+KP+L HLRVFG YV H+K K DD+S ++ G E +L+D EK ++RDVV EN +P +
Subjt: RKPHLAHLRVFGCVAYVKTTTPHLK----KLDDRSSPVVYFGVEEGCKAHRLYDPGREKLQISRDVVF-----------------------QENLEWPWN
Query: -------------------EVVSDGKEI--------------TEFQVMDQFCSDEFENLEDA---------ETRVENVIPHATEIPAIG-----------
+ + D KE TEF + C D + L+D+ E++ H E G
Subjt: -------------------EVVSDGKEI--------------TEFQVMDQFCSDEFENLEDA---------ETRVENVIPHATEIPAIG-----------
Query: ----ATGPSPPSTNTPVRLRSLTHIYINTEEVVGGDEQEN--EKLL---------------------KRPNWYKVMENELKSIEKNNTWSLTKLPPGHKP
G P+ N + + + + T+ + +E++N K++ + +W + + EL + + NNTW++TK P
Subjt: ----ATGPSPPSTNTPVRLRSLTHIYINTEEVVGGDEQEN--EKLL---------------------KRPNWYKVMENELKSIEKNNTWSLTKLPPGHKP
Query: IGLKWVFKLKKDPSVEVVKHNARLVAKG------IDFEEVLAPVARLDTVRVILVLVANQSWEVHHLDVKSTFLNGELEEEVYVTQSEGFEVPNKKHKVH
+ +WVF +K + +++ ARLVA+G ID+EE APVAR+ + R IL LV + +VH +DVK+ FLNG L+EE+Y+ +G + V
Subjt: IGLKWVFKLKKDPSVEVVKHNARLVAKG------IDFEEVLAPVARLDTVRVILVLVANQSWEVHHLDVKSTFLNGELEEEVYVTQSEGFEVPNKKHKVH
Query: RLSKALYGLRQAPRAWNIQLDRSLKELGFGKCTQKQVVYTRSEG--EECVLVEVYVDNLIVAGNSTEKVNKFKQQMMAEFEMSHLGLLSYYLGIEVEQQK
+L+KA+YGL+QA R W +++LKE F + + +Y +G E + V +YVD++++A ++N FK+ +M +F M+ L + +++GI +E Q+
Subjt: RLSKALYGLRQAPRAWNIQLDRSLKELGFGKCTQKQVVYTRSEG--EECVLVEVYVDNLIVAGNSTEKVNKFKQQMMAEFEMSHLGLLSYYLGIEVEQQK
Query: GRILLKQPTYAKRILSQFGMADCNATKYPMEPKAQLHKDMEGAPIEATEYRNIVGCLRY-LLNTRPNLSYVFGMASKYMERPTTIHYKVVKQILRYLRGT
+I L Q Y K+ILS+F M +CNA P+ K ++ + T R+++GCL Y +L TRP+L+ + S+Y + + ++ +K++LRYL+GT
Subjt: GRILLKQPTYAKRILSQFGMADCNATKYPMEPKAQLHKDMEGAPIEATEYRNIVGCLRY-LLNTRPNLSYVFGMASKYMERPTTIHYKVVKQILRYLRGT
Query: IHFGLTYTKG-PRQFDILGYSDSDLVSDLDGRKSTSGMKFYLNE-SLVSWNSQKQKTVTLSSCKAEFIAATTAACQALWLRCIVSEIVRMEPRSVTLFVD
I L + K + I+GY DSD RKST+G F + + +L+ WN+++Q +V SS +AE++A A +ALWL+ +++ I + ++ D
Subjt: IHFGLTYTKG-PRQFDILGYSDSDLVSDLDGRKSTSGMKFYLNE-SLVSWNSQKQKTVTLSSCKAEFIAATTAACQALWLRCIVSEIVRMEPRSVTLFVD
Query: NKSAIALMKNPVFHGCGKHIDTCFHFIQECVENGQIIVEFVNTREQRADVLTKALTRVKLAAMCQLLGV
N+ I++ NP H KHID +HF +E V+N I +E++ T Q AD+ TK L + + LG+
Subjt: NKSAIALMKNPVFHGCGKHIDTCFHFIQECVENGQIIVEFVNTREQRADVLTKALTRVKLAAMCQLLGV
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.8e-104 | 34.78 | Show/hide |
Query: AHLRVFGCVAYVKTTTPHLKKLDDRSSPVVYFGVEEGCKAHRLYDPGREKLQISRDVVFQEN---LEWPWNEVVSDG-----------------KEITEF
+HL+VFGC A+ KLDD+S P ++ G + +RL+DP ++K+ SRDVVF+E+ +E V +G E T
Subjt: AHLRVFGCVAYVKTTTPHLKKLDDRSSPVVYFGVEEGCKAHRLYDPGREKLQISRDVVFQEN---LEWPWNEVVSDG-----------------KEITEF
Query: QVMDQFCSDEFENLEDAETRVENVIPHATEIPAIGATGPSPPSTNTPVRLRSLTHIYINTEEVVGGDEQENEKL---LKRP---NWYKVMENELKSIEKN
+V +Q E +E E E V E P G P + R+ S Y +TE V+ D++E E L L P K M+ E++S++KN
Subjt: QVMDQFCSDEFENLEDAETRVENVIPHATEIPAIGATGPSPPSTNTPVRLRSLTHIYINTEEVVGGDEQENEKL---LKRP---NWYKVMENELKSIEKN
Query: NTWSLTKLPPGHKPIGLKWVFKLKKDPSVEVVKHNARLVA------KGIDFEEVLAPVARLDTVRVILVLVANQSWEVHHLDVKSTFLNGELEEEVYVTQ
T+ L +LP G +P+ KWVFKLKKD ++V++ ARLV KGIDF+E+ +PV ++ ++R IL L A+ EV LDVK+ FL+G+LEEE+Y+ Q
Subjt: NTWSLTKLPPGHKPIGLKWVFKLKKDPSVEVVKHNARLVA------KGIDFEEVLAPVARLDTVRVILVLVANQSWEVHHLDVKSTFLNGELEEEVYVTQ
Query: SEGFEVPNKKHKVHRLSKALYGLRQAPRAWNIQLDRSLKELGFGKCTQKQVVYTRSEGE-ECVLVEVYVDNLIVAGNSTEKVNKFKQQMMAEFEMSHLGL
EGFEV KKH V +L+K+LYGL+QAPR W ++ D +K + K VY + E +++ +YVD++++ G + K K + F+M LG
Subjt: SEGFEVPNKKHKVHRLSKALYGLRQAPRAWNIQLDRSLKELGFGKCTQKQVVYTRSEGE-ECVLVEVYVDNLIVAGNSTEKVNKFKQQMMAEFEMSHLGL
Query: LSYYLGIEV--EQQKGRILLKQPTYAKRILSQFGMADCNATKYPMEPKAQLHKDM------EGAPIEATEYRNIVGCLRY-LLNTRPNLSYVFGMASKYM
LG+++ E+ ++ L Q Y +R+L +F M + P+ +L K M E + Y + VG L Y ++ TRP++++ G+ S+++
Subjt: LSYYLGIEV--EQQKGRILLKQPTYAKRILSQFGMADCNATKYPMEPKAQLHKDM------EGAPIEATEYRNIVGCLRY-LLNTRPNLSYVFGMASKYM
Query: ERPTTIHYKVVKQILRYLRGTIHFGLTYTKGPRQFDILGYSDSDLVSDLDGRKSTSGMKFYLNESLVSWNSQKQKTVTLSSCKAEFIAATTAACQALWLR
E P H++ VK ILRYLRGT L + G + GY+D+D+ D+D RKS++G F + +SW S+ QK V LS+ +AE+IAAT + +WL+
Subjt: ERPTTIHYKVVKQILRYLRGTIHFGLTYTKGPRQFDILGYSDSDLVSDLDGRKSTSGMKFYLNESLVSWNSQKQKTVTLSSCKAEFIAATTAACQALWLR
Query: CIVSEIVRMEPRSVTLFVDNKSAIALMKNPVFHGCGKHIDTCFHFIQECVENGQIIVEFVNTREQRADVLTKALTRVKLAAMCQLLGVRN
+ E+ + + ++ D++SAI L KN ++H KHID +H+I+E V++ + V ++T E AD+LTK + R K +L+G+ +
Subjt: CIVSEIVRMEPRSVTLFVDNKSAIALMKNPVFHGCGKHIDTCFHFIQECVENGQIIVEFVNTREQRADVLTKALTRVKLAAMCQLLGVRN
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| P25600 Putative transposon Ty5-1 protein YCL074W | 2.6e-33 | 31.02 | Show/hide |
Query: LDVKSTFLNGELEEEVYVTQSEGFEVPNKKHKVHRLSKALYGLRQAPRAWNIQLDRSLKELGFGKCTQKQVVYTRSEGEECVLVEVYVDNLIVAGNSTEK
+DV + FLN ++E +YV Q GF V L +YGL+QAP WN ++ +LK++GF + + +Y RS + + + VYVD+L+VA S +
Subjt: LDVKSTFLNGELEEEVYVTQSEGFEVPNKKHKVHRLSKALYGLRQAPRAWNIQLDRSLKELGFGKCTQKQVVYTRSEGEECVLVEVYVDNLIVAGNSTEK
Query: VNKFKQQMMAEFEMSHLGLLSYYLGIEVEQ-QKGRILLKQPTYAKRILSQFGMADCNATKYPMEPKAQLHKDMEGAPIEATEYRNIVGCLRYLLNT-RPN
++ KQ++ + M LG + +LG+ + Q G I L Y + S+ + T+ P+ L + + T Y++IVG L + NT RP+
Subjt: VNKFKQQMMAEFEMSHLGLLSYYLGIEVEQ-QKGRILLKQPTYAKRILSQFGMADCNATKYPMEPKAQLHKDMEGAPIEATEYRNIVGCLRYLLNT-RPN
Query: LSYVFGMASKYMERPTTIHYKVVKQILRYLRGTIHFGLTYTKGPRQFDILGYSDSDLVSDLDGRKSTSGMKFYLNESLVSWNSQKQK-TVTLSSCKAEFI
+SY + S+++ P IH + +++LRYL T L Y G Q + Y D+ + D ST G L + V+W+S+K K + + S +AE+I
Subjt: LSYVFGMASKYMERPTTIHYKVVKQILRYLRGTIHFGLTYTKGPRQFDILGYSDSDLVSDLDGRKSTSGMKFYLNESLVSWNSQKQK-TVTLSSCKAEFI
Query: AAT
A+
Subjt: AAT
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.7e-80 | 34.47 | Show/hide |
Query: LKRPNWYKVMENELKSIEKNNTWSLTKLPPGHKPI-GLKWVFKLKKDPSVEVVKHNARLVAK------GIDFEEVLAPVARLDTVRVILVLVANQSWEVH
LK W M +E+ + N+TW L PP H I G +W+F K + + ++ ARLVAK G+D+ E +PV + ++R++L + ++SW +
Subjt: LKRPNWYKVMENELKSIEKNNTWSLTKLPPGHKPI-GLKWVFKLKKDPSVEVVKHNARLVAK------GIDFEEVLAPVARLDTVRVILVLVANQSWEVH
Query: HLDVKSTFLNGELEEEVYVTQSEGFEVPNKKHKVHRLSKALYGLRQAPRAWNIQLDRSLKELGFGKCTQKQVVYTRSEGEECVLVEVYVDNLIVAGNSTE
LDV + FL G L ++VY++Q GF ++ + V +L KALYGL+QAPRAW ++L L +GF ++ G+ V + VYVD++++ GN
Subjt: HLDVKSTFLNGELEEEVYVTQSEGFEVPNKKHKVHRLSKALYGLRQAPRAWNIQLDRSLKELGFGKCTQKQVVYTRSEGEECVLVEVYVDNLIVAGNSTE
Query: KVNKFKQQMMAEFEMSHLGLLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATKYPMEPKAQLHKDMEGAPIEATEYRNIVGCLRYLLNTRPNL
++ + F + L Y+LGIE ++ + L Q Y +L++ M PM P +L + TEYR IVG L+YL TRP++
Subjt: KVNKFKQQMMAEFEMSHLGLLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATKYPMEPKAQLHKDMEGAPIEATEYRNIVGCLRYLLNTRPNL
Query: SYVFGMASKYMERPTTIHYKVVKQILRYLRGTIHFGLTYTKGPRQFDILGYSDSDLVSDLDGRKSTSGMKFYLNESLVSWNSQKQKTVTLSSCKAEFIAA
SY S++M PT H + +K+ILRYL GT + G+ KG + YSD+D D D ST+G YL +SW+S+KQK V SS +AE+ +
Subjt: SYVFGMASKYMERPTTIHYKVVKQILRYLRGTIHFGLTYTKGPRQFDILGYSDSDLVSDLDGRKSTSGMKFYLNESLVSWNSQKQKTVTLSSCKAEFIAA
Query: TTAACQALWLRCIVSEIVRMEPRSVTLFVDNKSAIALMKNPVFHGCGKHIDTCFHFIQECVENGQIIVEFVNTREQRADVLTKALTRVKLAAMCQLLGV
+ + W+ +++E+ R ++ DN A L NPVFH KHI +HFI+ V++G + V V+T +Q AD LTK L+R +GV
Subjt: TTAACQALWLRCIVSEIVRMEPRSVTLFVDNKSAIALMKNPVFHGCGKHIDTCFHFIQECVENGQIIVEFVNTREQRADVLTKALTRVKLAAMCQLLGV
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 7.0e-79 | 34.93 | Show/hide |
Query: LKRPNWYKVMENELKSIEKNNTWSLTKLPPGHKPI-GLKWVFKLKKDPSVEVVKHNARLVAK------GIDFEEVLAPVARLDTVRVILVLVANQSWEVH
+K W + M +E+ + N+TW L PP I G +W+F K + + ++ ARLVAK G+D+ E +PV + ++R++L + ++SW +
Subjt: LKRPNWYKVMENELKSIEKNNTWSLTKLPPGHKPI-GLKWVFKLKKDPSVEVVKHNARLVAK------GIDFEEVLAPVARLDTVRVILVLVANQSWEVH
Query: HLDVKSTFLNGELEEEVYVTQSEGFEVPNKKHKVHRLSKALYGLRQAPRAWNIQLDRSLKELGFGKCTQKQVVYTRSEGEECVLVEVYVDNLIVAGNSTE
LDV + FL G L +EVY++Q GF ++ V RL KA+YGL+QAPRAW ++L L +GF ++ G + + VYVD++++ GN T
Subjt: HLDVKSTFLNGELEEEVYVTQSEGFEVPNKKHKVHRLSKALYGLRQAPRAWNIQLDRSLKELGFGKCTQKQVVYTRSEGEECVLVEVYVDNLIVAGNSTE
Query: KVNKFKQQMMAEFEMSHLGLLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATKYPM--EPKAQLHKDMEGAPIEATEYRNIVGCLRYLLNTRP
+ + F + L Y+LGIE ++ + L Q Y +L++ M PM PK LH + P + TEYR IVG L+YL TRP
Subjt: KVNKFKQQMMAEFEMSHLGLLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATKYPM--EPKAQLHKDMEGAPIEATEYRNIVGCLRYLLNTRP
Query: NLSYVFGMASKYMERPTTIHYKVVKQILRYLRGTIHFGLTYTKGPRQFDILGYSDSDLVSDLDGRKSTSGMKFYLNESLVSWNSQKQKTVTLSSCKAEFI
+LSY S+YM PT H+ +K++LRYL GT G+ KG + YSD+D D D ST+G YL +SW+S+KQK V SS +AE+
Subjt: NLSYVFGMASKYMERPTTIHYKVVKQILRYLRGTIHFGLTYTKGPRQFDILGYSDSDLVSDLDGRKSTSGMKFYLNESLVSWNSQKQKTVTLSSCKAEFI
Query: AATTAACQALWLRCIVSEIVRMEPRSVTLFVDNKSAIALMKNPVFHGCGKHIDTCFHFIQECVENGQIIVEFVNTREQRADVLTKALTRVKLAAMCQLLG
+ + + W+ +++E+ ++ DN A L NPVFH KHI +HFI+ V++G + V V+T +Q AD LTK L+RV + +G
Subjt: AATTAACQALWLRCIVSEIVRMEPRSVTLFVDNKSAIALMKNPVFHGCGKHIDTCFHFIQECVENGQIIVEFVNTREQRADVLTKALTRVKLAAMCQLLG
Query: V
V
Subjt: V
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 3.7e-75 | 33.7 | Show/hide |
Query: WYKVMENELKSIEKNNTWSLTKLPPGHKPIGLKWVFKLKKDPSVEVVKHNARLVAK------GIDFEEVLAPVARLDTVRVILVLVANQSWEVHHLDVKS
W M++E+ ++E +TW + LPP KPIG KWV+K+K + + ++ ARLVAK GIDF E +PV +L +V++IL + A ++ +H LD+ +
Subjt: WYKVMENELKSIEKNNTWSLTKLPPGHKPIGLKWVFKLKKDPSVEVVKHNARLVAK------GIDFEEVLAPVARLDTVRVILVLVANQSWEVHHLDVKS
Query: TFLNGELEEEVYVTQSEGFEVPN----KKHKVHRLSKALYGLRQAPRAWNIQLDRSLKELGFGKCTQKQVVYTRSEGEECVLVEVYVDNLIVAGNSTEKV
FLNG+L+EE+Y+ G+ + V L K++YGL+QA R W ++ +L GF + + + + V VYVD++I+ N+ V
Subjt: TFLNGELEEEVYVTQSEGFEVPN----KKHKVHRLSKALYGLRQAPRAWNIQLDRSLKELGFGKCTQKQVVYTRSEGEECVLVEVYVDNLIVAGNSTEKV
Query: NKFKQQMMAEFEMSHLGLLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATKYPMEPKAQLHKDMEGAPIEATEYRNIVGCLRYLLNTRPNLSY
++ K Q+ + F++ LG L Y+LG+E+ + I + Q YA +L + G+ C + PM+P G ++A YR ++G L YL TR ++S+
Subjt: NKFKQQMMAEFEMSHLGLLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATKYPMEPKAQLHKDMEGAPIEATEYRNIVGCLRYLLNTRPNLSY
Query: VFGMASKYMERPTTIHYKVVKQILRYLRGTIHFGLTYTKGPRQFDILGYSDSDLVSDLDGRKSTSGMKFYLNESLVSWNSQKQKTVTLSSCKAEFIAATT
S++ E P H + V +IL Y++GT+ GL Y+ + + +SD+ S D R+ST+G +L SL+SW S+KQ+ V+ SS +AE+ A +
Subjt: VFGMASKYMERPTTIHYKVVKQILRYLRGTIHFGLTYTKGPRQFDILGYSDSDLVSDLDGRKSTSGMKFYLNESLVSWNSQKQKTVTLSSCKAEFIAATT
Query: AACQALWLRCIVSEIVRMEPRSVTLFVDNKSAIALMKNPVFHGCGKHIDTCFHFIQE
A + +WL E+ + LF DN +AI + N VFH KHI++ H ++E
Subjt: AACQALWLRCIVSEIVRMEPRSVTLFVDNKSAIALMKNPVFHGCGKHIDTCFHFIQE
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| ATMG00240.1 Gag-Pol-related retrotransposon family protein | 1.5e-04 | 31.17 | Show/hide |
Query: YLLNTRPNLSYVFGMASKYMERPTTIHYKVVKQILRYLRGTIHFGLTYTKGPRQFDILGYSDSDLVSDLDGRKSTSG
YL TRP+L++ S++ T + V ++L Y++GT+ GL Y+ + ++DSD S D R+S +G
Subjt: YLLNTRPNLSYVFGMASKYMERPTTIHYKVVKQILRYLRGTIHFGLTYTKGPRQFDILGYSDSDLVSDLDGRKSTSG
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 1.7e-32 | 32.29 | Show/hide |
Query: VYVDNLIVAGNSTEKVNKFKQQMMAEFEMSHLGLLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATKYPMEPKAQLHKDMEGAPIEATEYRNI
+YVD++++ G+S +N Q+ + F M LG + Y+LGI+++ + L Q YA++IL+ GM DC P+ K P + +++R+I
Subjt: VYVDNLIVAGNSTEKVNKFKQQMMAEFEMSHLGLLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATKYPMEPKAQLHKDMEGAPIEATEYRNI
Query: VGCLRYLLNTRPNLSYVFGMASKYMERPTTIHYKVVKQILRYLRGTIHFGLTYTKGPRQFDILGYSDSDLVSDLDGRKSTSGMKFYLNESLVSWNSQKQK
VG L+YL TRP++SY + + M PT + ++K++LRY++GTI GL Y + ++ + DSD R+ST+G +L +++SW++++Q
Subjt: VGCLRYLLNTRPNLSYVFGMASKYMERPTTIHYKVVKQILRYLRGTIHFGLTYTKGPRQFDILGYSDSDLVSDLDGRKSTSGMKFYLNESLVSWNSQKQK
Query: TVTLSSCKAEFIAATTAACQALW
TV+ SS + E+ A A + W
Subjt: TVTLSSCKAEFIAATTAACQALW
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 7.1e-10 | 40.91 | Show/hide |
Query: LKRPNWYKVMENELKSIEKNNTWSLTKLPPGHKPIGLKWVFKLKKDPSVEVVKHNARLVAK------GIDFEEVLAPVARLDTVRVIL
LK P W + M+ EL ++ +N TW L P +G KWVFK K + + ARLVAK GI F E +PV R T+R IL
Subjt: LKRPNWYKVMENELKSIEKNNTWSLTKLPPGHKPIGLKWVFKLKKDPSVEVVKHNARLVAK------GIDFEEVLAPVARLDTVRVIL
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