; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI07G13630 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G13630
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionReverse transcriptase
Genome locationChr7:12145927..12147324
RNA-Seq ExpressionCSPI07G13630
SyntenyCSPI07G13630
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050636.1 reverse transcriptase [Cucumis melo var. makuwa]2.3e-11785.66Show/hide
Query:  MTLLNV-----TAAVENYRSFISSLFKPQYGLYDQDEHFHLRKQKLEPLLLGWDTDYIKDESSSQLTELNTIAKSPISFADD-QPTMHESFGAAPLCSSP
        MTLL+V     TAAVENYRSFISSLF PQY LYDQDEH HLRKQKLEPLLLGWDTDYIKDESSSQLTELNT AKSPISFADD QPT+HESFGA  LCSSP
Subjt:  MTLLNV-----TAAVENYRSFISSLFKPQYGLYDQDEHFHLRKQKLEPLLLGWDTDYIKDESSSQLTELNTIAKSPISFADD-QPTMHESFGAAPLCSSP

Query:  FPSSNRTNLNSLPYSSLASSQIHGLSWQNVA-GEDIGTTFNNLHLNFSSVPKFLHQCNSSVDDGGCHDLCAQNTDWVMNNVLDDGSQHPSIESLCASGLV
        FPSSNR N NSLPYS+LAS QI GLSWQNV+  EDI  TFNNLHLNFSSVPK LHQCNS VDDGGCHDLCAQN DWVMNNV++D SQHPS+ESLCASGLV
Subjt:  FPSSNRTNLNSLPYSSLASSQIHGLSWQNVA-GEDIGTTFNNLHLNFSSVPKFLHQCNSSVDDGGCHDLCAQNTDWVMNNVLDDGSQHPSIESLCASGLV

Query:  FDFGCKYLSDSKEQCQTAYHILKYPMDEIQPTALTNEEWSNDSSDDVLVDY
        FDFG KYLS SKEQCQT+YHILKYP+DEIQPTAL NEEWSNDSSDDVLVDY
Subjt:  FDFGCKYLSDSKEQCQTAYHILKYPMDEIQPTALTNEEWSNDSSDDVLVDY

KAE8646221.1 hypothetical protein Csa_016557 [Cucumis sativus]1.0e-13698.36Show/hide
Query:  MTLLNVTAAVENYRSFISSLFKPQYGLYDQDEHFHLRKQKLEPLLLGWDTDYIKDESSSQLTELNTIAKSPISFADDQPTMHESFGAAPLCSSPFPSSNR
        MTLLNVTAAVENYRSFISSLFKPQYGLYDQDEHFHLRKQKL+PLLLGWDTDYIKDESSSQLTELNTIAKSPISFADDQPTMHESFGAAPLCSSPFPSSNR
Subjt:  MTLLNVTAAVENYRSFISSLFKPQYGLYDQDEHFHLRKQKLEPLLLGWDTDYIKDESSSQLTELNTIAKSPISFADDQPTMHESFGAAPLCSSPFPSSNR

Query:  TNLNSLPYSSLASSQIHGLSWQNVAGEDIGTTFNNLHLNFSSVPKFLHQCNSSVDDGGCHDLCAQNTDWVMNNVLDDGSQHPSIESLCASGLVFDFGCKY
        TNLNSLPYSSLASSQIHGLSWQNVAGEDIGTTFNNLHLNFSSVPKFLHQ NSSVDDGGCHDLCAQNTDWVMNNVLDDGSQHPSIESLCASGLVFDFGCKY
Subjt:  TNLNSLPYSSLASSQIHGLSWQNVAGEDIGTTFNNLHLNFSSVPKFLHQCNSSVDDGGCHDLCAQNTDWVMNNVLDDGSQHPSIESLCASGLVFDFGCKY

Query:  LSDSKEQCQTAYHILKYPMDEIQPTALTNEEWSNDSSDDVLVDY
        LSDSKEQ QTAYHILKYP+DEIQPTALTNEEWSNDSSDDVLVDY
Subjt:  LSDSKEQCQTAYHILKYPMDEIQPTALTNEEWSNDSSDDVLVDY

XP_008461985.1 PREDICTED: uncharacterized protein LOC103500465 [Cucumis melo]2.3e-11785.66Show/hide
Query:  MTLLNV-----TAAVENYRSFISSLFKPQYGLYDQDEHFHLRKQKLEPLLLGWDTDYIKDESSSQLTELNTIAKSPISFADD-QPTMHESFGAAPLCSSP
        MTLL+V     TAAVENYRSFISSLF PQY LYDQDEH HLRKQKLEPLLLGWDTDYIKDESSSQLTELNT AKSPISFADD QPT+HESFGA  LCSSP
Subjt:  MTLLNV-----TAAVENYRSFISSLFKPQYGLYDQDEHFHLRKQKLEPLLLGWDTDYIKDESSSQLTELNTIAKSPISFADD-QPTMHESFGAAPLCSSP

Query:  FPSSNRTNLNSLPYSSLASSQIHGLSWQNVA-GEDIGTTFNNLHLNFSSVPKFLHQCNSSVDDGGCHDLCAQNTDWVMNNVLDDGSQHPSIESLCASGLV
        FPSSNR N NSLPYS+LAS QI GLSWQNV+  EDI  TFNNLHLNFSSVPK LHQCNS VDDGGCHDLCAQN DWVMNNV++D SQHPS+ESLCASGLV
Subjt:  FPSSNRTNLNSLPYSSLASSQIHGLSWQNVA-GEDIGTTFNNLHLNFSSVPKFLHQCNSSVDDGGCHDLCAQNTDWVMNNVLDDGSQHPSIESLCASGLV

Query:  FDFGCKYLSDSKEQCQTAYHILKYPMDEIQPTALTNEEWSNDSSDDVLVDY
        FDFG KYLS SKEQCQT+YHILKYP+DEIQPTAL NEEWSNDSSDDVLVDY
Subjt:  FDFGCKYLSDSKEQCQTAYHILKYPMDEIQPTALTNEEWSNDSSDDVLVDY

XP_011659159.1 uncharacterized protein LOC101207408 [Cucumis sativus]1.0e-13698.36Show/hide
Query:  MTLLNVTAAVENYRSFISSLFKPQYGLYDQDEHFHLRKQKLEPLLLGWDTDYIKDESSSQLTELNTIAKSPISFADDQPTMHESFGAAPLCSSPFPSSNR
        MTLLNVTAAVENYRSFISSLFKPQYGLYDQDEHFHLRKQKL+PLLLGWDTDYIKDESSSQLTELNTIAKSPISFADDQPTMHESFGAAPLCSSPFPSSNR
Subjt:  MTLLNVTAAVENYRSFISSLFKPQYGLYDQDEHFHLRKQKLEPLLLGWDTDYIKDESSSQLTELNTIAKSPISFADDQPTMHESFGAAPLCSSPFPSSNR

Query:  TNLNSLPYSSLASSQIHGLSWQNVAGEDIGTTFNNLHLNFSSVPKFLHQCNSSVDDGGCHDLCAQNTDWVMNNVLDDGSQHPSIESLCASGLVFDFGCKY
        TNLNSLPYSSLASSQIHGLSWQNVAGEDIGTTFNNLHLNFSSVPKFLHQ NSSVDDGGCHDLCAQNTDWVMNNVLDDGSQHPSIESLCASGLVFDFGCKY
Subjt:  TNLNSLPYSSLASSQIHGLSWQNVAGEDIGTTFNNLHLNFSSVPKFLHQCNSSVDDGGCHDLCAQNTDWVMNNVLDDGSQHPSIESLCASGLVFDFGCKY

Query:  LSDSKEQCQTAYHILKYPMDEIQPTALTNEEWSNDSSDDVLVDY
        LSDSKEQ QTAYHILKYP+DEIQPTALTNEEWSNDSSDDVLVDY
Subjt:  LSDSKEQCQTAYHILKYPMDEIQPTALTNEEWSNDSSDDVLVDY

XP_038897159.1 uncharacterized protein LOC120085308 isoform X4 [Benincasa hispida]1.2e-8674.35Show/hide
Query:  MTLLNV-----TAAVENYRSFISSLFKPQYGLYDQDEHFHLRKQKLEPLLLGWDTDYIKDES-SSQLTELNTIAKSPISFADD-QPTMHESFGAAPLCSS
        MTLL+V     TAAV+NYRS ISSLFKPQYGLYDQ EH +LRKQ+LEPLLLGWDTD IKD S SSQLTELNT A+ PI+FADD QP +H+SFGA  LCSS
Subjt:  MTLLNV-----TAAVENYRSFISSLFKPQYGLYDQDEHFHLRKQKLEPLLLGWDTDYIKDES-SSQLTELNTIAKSPISFADD-QPTMHESFGAAPLCSS

Query:  PFPSSNRTNLNSLPYSSLASSQIHGLSWQNV-AGEDIGTTFNNLHLNFSSVPKFLHQCNSSVDDGGCHDLCAQNTDWVMNNVLDDGSQHPSIESLCASGL
        PFPSSNR NL SLPYSSLAS QI GLSW NV   EDI  TFNN+HLNFSSVPK L QC++ V+D G  D CAQ+ DWVMNNVLDD  Q+PS+ESLCAS +
Subjt:  PFPSSNRTNLNSLPYSSLASSQIHGLSWQNV-AGEDIGTTFNNLHLNFSSVPKFLHQCNSSVDDGGCHDLCAQNTDWVMNNVLDDGSQHPSIESLCASGL

Query:  VFDFGCKYLSDSKEQCQTAYHILKYPMDEI
        VFDFG KYLS SKEQCQTAYHIL+YP DE+
Subjt:  VFDFGCKYLSDSKEQCQTAYHILKYPMDEI

TrEMBL top hitse value%identityAlignment
A0A0A0K889 Uncharacterized protein4.9e-13798.36Show/hide
Query:  MTLLNVTAAVENYRSFISSLFKPQYGLYDQDEHFHLRKQKLEPLLLGWDTDYIKDESSSQLTELNTIAKSPISFADDQPTMHESFGAAPLCSSPFPSSNR
        MTLLNVTAAVENYRSFISSLFKPQYGLYDQDEHFHLRKQKL+PLLLGWDTDYIKDESSSQLTELNTIAKSPISFADDQPTMHESFGAAPLCSSPFPSSNR
Subjt:  MTLLNVTAAVENYRSFISSLFKPQYGLYDQDEHFHLRKQKLEPLLLGWDTDYIKDESSSQLTELNTIAKSPISFADDQPTMHESFGAAPLCSSPFPSSNR

Query:  TNLNSLPYSSLASSQIHGLSWQNVAGEDIGTTFNNLHLNFSSVPKFLHQCNSSVDDGGCHDLCAQNTDWVMNNVLDDGSQHPSIESLCASGLVFDFGCKY
        TNLNSLPYSSLASSQIHGLSWQNVAGEDIGTTFNNLHLNFSSVPKFLHQ NSSVDDGGCHDLCAQNTDWVMNNVLDDGSQHPSIESLCASGLVFDFGCKY
Subjt:  TNLNSLPYSSLASSQIHGLSWQNVAGEDIGTTFNNLHLNFSSVPKFLHQCNSSVDDGGCHDLCAQNTDWVMNNVLDDGSQHPSIESLCASGLVFDFGCKY

Query:  LSDSKEQCQTAYHILKYPMDEIQPTALTNEEWSNDSSDDVLVDY
        LSDSKEQ QTAYHILKYP+DEIQPTALTNEEWSNDSSDDVLVDY
Subjt:  LSDSKEQCQTAYHILKYPMDEIQPTALTNEEWSNDSSDDVLVDY

A0A1S3CFT3 uncharacterized protein LOC1035004651.1e-11785.66Show/hide
Query:  MTLLNV-----TAAVENYRSFISSLFKPQYGLYDQDEHFHLRKQKLEPLLLGWDTDYIKDESSSQLTELNTIAKSPISFADD-QPTMHESFGAAPLCSSP
        MTLL+V     TAAVENYRSFISSLF PQY LYDQDEH HLRKQKLEPLLLGWDTDYIKDESSSQLTELNT AKSPISFADD QPT+HESFGA  LCSSP
Subjt:  MTLLNV-----TAAVENYRSFISSLFKPQYGLYDQDEHFHLRKQKLEPLLLGWDTDYIKDESSSQLTELNTIAKSPISFADD-QPTMHESFGAAPLCSSP

Query:  FPSSNRTNLNSLPYSSLASSQIHGLSWQNVA-GEDIGTTFNNLHLNFSSVPKFLHQCNSSVDDGGCHDLCAQNTDWVMNNVLDDGSQHPSIESLCASGLV
        FPSSNR N NSLPYS+LAS QI GLSWQNV+  EDI  TFNNLHLNFSSVPK LHQCNS VDDGGCHDLCAQN DWVMNNV++D SQHPS+ESLCASGLV
Subjt:  FPSSNRTNLNSLPYSSLASSQIHGLSWQNVA-GEDIGTTFNNLHLNFSSVPKFLHQCNSSVDDGGCHDLCAQNTDWVMNNVLDDGSQHPSIESLCASGLV

Query:  FDFGCKYLSDSKEQCQTAYHILKYPMDEIQPTALTNEEWSNDSSDDVLVDY
        FDFG KYLS SKEQCQT+YHILKYP+DEIQPTAL NEEWSNDSSDDVLVDY
Subjt:  FDFGCKYLSDSKEQCQTAYHILKYPMDEIQPTALTNEEWSNDSSDDVLVDY

A0A5A7U8Y2 Reverse transcriptase1.1e-11785.66Show/hide
Query:  MTLLNV-----TAAVENYRSFISSLFKPQYGLYDQDEHFHLRKQKLEPLLLGWDTDYIKDESSSQLTELNTIAKSPISFADD-QPTMHESFGAAPLCSSP
        MTLL+V     TAAVENYRSFISSLF PQY LYDQDEH HLRKQKLEPLLLGWDTDYIKDESSSQLTELNT AKSPISFADD QPT+HESFGA  LCSSP
Subjt:  MTLLNV-----TAAVENYRSFISSLFKPQYGLYDQDEHFHLRKQKLEPLLLGWDTDYIKDESSSQLTELNTIAKSPISFADD-QPTMHESFGAAPLCSSP

Query:  FPSSNRTNLNSLPYSSLASSQIHGLSWQNVA-GEDIGTTFNNLHLNFSSVPKFLHQCNSSVDDGGCHDLCAQNTDWVMNNVLDDGSQHPSIESLCASGLV
        FPSSNR N NSLPYS+LAS QI GLSWQNV+  EDI  TFNNLHLNFSSVPK LHQCNS VDDGGCHDLCAQN DWVMNNV++D SQHPS+ESLCASGLV
Subjt:  FPSSNRTNLNSLPYSSLASSQIHGLSWQNVA-GEDIGTTFNNLHLNFSSVPKFLHQCNSSVDDGGCHDLCAQNTDWVMNNVLDDGSQHPSIESLCASGLV

Query:  FDFGCKYLSDSKEQCQTAYHILKYPMDEIQPTALTNEEWSNDSSDDVLVDY
        FDFG KYLS SKEQCQT+YHILKYP+DEIQPTAL NEEWSNDSSDDVLVDY
Subjt:  FDFGCKYLSDSKEQCQTAYHILKYPMDEIQPTALTNEEWSNDSSDDVLVDY

A0A6J1GQM4 uncharacterized protein LOC111456585 isoform X51.8e-7864.23Show/hide
Query:  MTLLNV-----TAAVENYRSFISSLFKPQYGLYDQDEHFHLRKQKLEPLLLGWDTDYIKDESSSQLTELNTIAKSPISFADD-QPTMHESFGAAPLCSSP
        MTLL+      TAAVENYR  IS+LF  QYG YDQ E  H+RKQ++EPLLLGWDTD IKD+ SS+ TE +T A+ PISFADD QP +HESFGA  LCSSP
Subjt:  MTLLNV-----TAAVENYRSFISSLFKPQYGLYDQDEHFHLRKQKLEPLLLGWDTDYIKDESSSQLTELNTIAKSPISFADD-QPTMHESFGAAPLCSSP

Query:  FPSSNRTNLNSLPYSSLASSQIHGLSWQNVAGED-IGTTFNNLHLNFSSVPKFLHQCNSSVDDGG-CHDLCAQNTDWVMNNVLDDGSQHPSIESLCASGL
        FPSSN  +L SLPYSSLAS QIHGLS  NV  E+ I  T NN+HLNFSSVPK L QC++ VDD G C   CAQ+ +W MN  LDD  ++PS++S+CASG 
Subjt:  FPSSNRTNLNSLPYSSLASSQIHGLSWQNVAGED-IGTTFNNLHLNFSSVPKFLHQCNSSVDDGG-CHDLCAQNTDWVMNNVLDDGSQHPSIESLCASGL

Query:  VFDFGCKYLSDSKEQCQTAYHILKYPMDEIQPTALTNEEWSNDSSD
        VFDFG KYLS SKE CQTAYH+L+YP+DE++PT+  NEE + DSS+
Subjt:  VFDFGCKYLSDSKEQCQTAYHILKYPMDEIQPTALTNEEWSNDSSD

A0A6J1GQP2 uncharacterized protein LOC111456585 isoform X11.8e-7864.23Show/hide
Query:  MTLLNV-----TAAVENYRSFISSLFKPQYGLYDQDEHFHLRKQKLEPLLLGWDTDYIKDESSSQLTELNTIAKSPISFADD-QPTMHESFGAAPLCSSP
        MTLL+      TAAVENYR  IS+LF  QYG YDQ E  H+RKQ++EPLLLGWDTD IKD+ SS+ TE +T A+ PISFADD QP +HESFGA  LCSSP
Subjt:  MTLLNV-----TAAVENYRSFISSLFKPQYGLYDQDEHFHLRKQKLEPLLLGWDTDYIKDESSSQLTELNTIAKSPISFADD-QPTMHESFGAAPLCSSP

Query:  FPSSNRTNLNSLPYSSLASSQIHGLSWQNVAGED-IGTTFNNLHLNFSSVPKFLHQCNSSVDDGG-CHDLCAQNTDWVMNNVLDDGSQHPSIESLCASGL
        FPSSN  +L SLPYSSLAS QIHGLS  NV  E+ I  T NN+HLNFSSVPK L QC++ VDD G C   CAQ+ +W MN  LDD  ++PS++S+CASG 
Subjt:  FPSSNRTNLNSLPYSSLASSQIHGLSWQNVAGED-IGTTFNNLHLNFSSVPKFLHQCNSSVDDGG-CHDLCAQNTDWVMNNVLDDGSQHPSIESLCASGL

Query:  VFDFGCKYLSDSKEQCQTAYHILKYPMDEIQPTALTNEEWSNDSSD
        VFDFG KYLS SKE CQTAYH+L+YP+DE++PT+  NEE + DSS+
Subjt:  VFDFGCKYLSDSKEQCQTAYHILKYPMDEIQPTALTNEEWSNDSSD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCTGCTTAATGTCACCGCTGCAGTTGAAAACTATAGGTCATTTATTTCCAGCCTTTTCAAGCCACAATACGGTTTATATGATCAAGATGAACATTTTCACCTAAG
AAAACAAAAGCTAGAACCTCTTCTGCTCGGTTGGGATACTGACTACATAAAAGATGAAAGTTCTTCTCAACTTACAGAGTTGAACACAATTGCCAAGTCACCAATTTCAT
TCGCTGATGATCAGCCAACCATGCACGAGAGTTTTGGTGCTGCTCCGCTGTGTTCATCCCCTTTCCCTTCCAGTAATCGTACAAACTTAAACTCATTGCCATACTCCAGT
TTAGCCAGCTCTCAAATCCATGGATTAAGTTGGCAAAATGTAGCAGGGGAAGATATTGGTACCACTTTCAACAACCTGCATTTGAATTTCTCGTCAGTACCCAAATTTCT
TCATCAATGCAATAGTTCTGTCGATGATGGAGGTTGCCATGACTTGTGTGCACAAAACACTGATTGGGTTATGAATAACGTGTTGGATGACGGATCCCAACATCCTTCTA
TTGAAAGTCTGTGTGCTTCTGGCCTTGTCTTTGATTTTGGATGCAAATACCTTTCAGACTCAAAGGAACAATGCCAAACAGCTTATCATATACTTAAGTACCCAATGGAT
GAAATACAACCCACAGCCCTAACCAATGAAGAATGGAGTAATGACAGTTCAGATGATGTGCTTGTGGATTATTGA
mRNA sequenceShow/hide mRNA sequence
CTTATACCAGAGAGAAATCAGTATAAGTTTAATAATAACTTGGAAAAAATACAAAGGTTGCGTGGAAGGTGCTGTCCTTGGCTTGATTATGAGCATCATTTGAATAATAG
TTTATCACCTTGTCGTTTGAATAAATCAAGAGGAAGATCTTTTTCTCATTCTGATTTCTCAACCAATAGCGAGGACAACAATTTCCAAATTAAATACAGAACTAAGGAGT
TCGACTGCAATGTAGACAGAAAAATGACTCTGCTTAATGTCACCGCTGCAGTTGAAAACTATAGGTCATTTATTTCCAGCCTTTTCAAGCCACAATACGGTTTATATGAT
CAAGATGAACATTTTCACCTAAGAAAACAAAAGCTAGAACCTCTTCTGCTCGGTTGGGATACTGACTACATAAAAGATGAAAGTTCTTCTCAACTTACAGAGTTGAACAC
AATTGCCAAGTCACCAATTTCATTCGCTGATGATCAGCCAACCATGCACGAGAGTTTTGGTGCTGCTCCGCTGTGTTCATCCCCTTTCCCTTCCAGTAATCGTACAAACT
TAAACTCATTGCCATACTCCAGTTTAGCCAGCTCTCAAATCCATGGATTAAGTTGGCAAAATGTAGCAGGGGAAGATATTGGTACCACTTTCAACAACCTGCATTTGAAT
TTCTCGTCAGTACCCAAATTTCTTCATCAATGCAATAGTTCTGTCGATGATGGAGGTTGCCATGACTTGTGTGCACAAAACACTGATTGGGTTATGAATAACGTGTTGGA
TGACGGATCCCAACATCCTTCTATTGAAAGTCTGTGTGCTTCTGGCCTTGTCTTTGATTTTGGATGCAAATACCTTTCAGACTCAAAGGAACAATGCCAAACAGCTTATC
ATATACTTAAGTACCCAATGGATGAAATACAACCCACAGCCCTAACCAATGAAGAATGGAGTAATGACAGTTCAGATGATGTGCTTGTGGATTATTGACCGCCCTTCTTT
ATCCAACCCGAGTCATTCTTTCAAGAAGGGAAGGTATACTCTATACTGACTGATAAACTTAGCTGGGATGTAGCCAGAAGTGAAATAAATGTTGATGATATAACTGAAAT
GAATTACATATGATAGTAGGTTCAATTTTTAATTGATCCTTTATGCTTAATCATGTCTCCTCTTTTGGCCTATCTTTTTATTTTACATTGTGGGCTAAAGAGAGATGGAG
ATTTCTGAGGGGGAAGGTTTCTTGGTTGAGCGAGAACTCAACATGATTTTTTTGGTGC
Protein sequenceShow/hide protein sequence
MTLLNVTAAVENYRSFISSLFKPQYGLYDQDEHFHLRKQKLEPLLLGWDTDYIKDESSSQLTELNTIAKSPISFADDQPTMHESFGAAPLCSSPFPSSNRTNLNSLPYSS
LASSQIHGLSWQNVAGEDIGTTFNNLHLNFSSVPKFLHQCNSSVDDGGCHDLCAQNTDWVMNNVLDDGSQHPSIESLCASGLVFDFGCKYLSDSKEQCQTAYHILKYPMD
EIQPTALTNEEWSNDSSDDVLVDY