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CSPI07G13670 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G13670
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionProtein NLRC3 isoform X1
Genome locationChr7:12183416..12186573
RNA-Seq ExpressionCSPI07G13670
SyntenyCSPI07G13670
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050628.1 protein NLRC3 isoform X1 [Cucumis melo var. makuwa]5.8e-6570.59Show/hide
Query:  MEGFAQSTGCDLYTLGK----KAFWFLGSALQLMSFGAYGWRGDIIESLGAFSLLVCAFWSQLAFLPFELQNEDEYDNNCLVDGRKRRRSSNFNLAWKKN
        M+GFAQ+TGC+L    +     +F  LGSA+         W G   +  G F+L   +    +   PFELQNEDEYDN CLVDGRKRRRSSNFNLAWKKN
Subjt:  MEGFAQSTGCDLYTLGK----KAFWFLGSALQLMSFGAYGWRGDIIESLGAFSLLVCAFWSQLAFLPFELQNEDEYDNNCLVDGRKRRRSSNFNLAWKKN

Query:  FDLRWSKLTDTIQPVDWQQIYWETHLQSCLDEAAEIASLPSFSKCIGEIEMSDSILKYIASKESVHFWRAKYRYLSYHCQEFGCYAL
        F+LRWSKLTD IQPVDWQQIYWE HLQSCLDEAAEIASLPSFSKCIGEIEMSDSILKYIAS++S+HFWRAKYR LSYHCQEFGCYAL
Subjt:  FDLRWSKLTDTIQPVDWQQIYWETHLQSCLDEAAEIASLPSFSKCIGEIEMSDSILKYIASKESVHFWRAKYRYLSYHCQEFGCYAL

XP_004139728.1 protein NLRC3 isoform X2 [Cucumis sativus]4.4e-6598.36Show/hide
Query:  LPFELQNEDEYDNNCLVDGRKRRRSSNFNLAWKKNFDLRWSKLTDTIQPVDWQQIYWETHLQSCLDEAAEIASLPSFSKCIGEIEMSDSILKYIASKESV
        +PFELQNEDEYDNNCL+DGRKRRRSSNFNLAWKKNFDLRWSKLTDTIQPVDWQQIYWETHLQSCLDEAAEIASLPSFSKCIGEIEMSDSILKYIASKESV
Subjt:  LPFELQNEDEYDNNCLVDGRKRRRSSNFNLAWKKNFDLRWSKLTDTIQPVDWQQIYWETHLQSCLDEAAEIASLPSFSKCIGEIEMSDSILKYIASKESV

Query:  HFWRAKYRYLSYHCQEFGCYAL
        HFWRAKYRYLSYHCQEFGCYAL
Subjt:  HFWRAKYRYLSYHCQEFGCYAL

XP_008461991.1 PREDICTED: uncharacterized protein LOC103500467 isoform X2 [Cucumis melo]2.3e-6181.94Show/hide
Query:  DIIESLGAFSLLVCAFWSQLAFLPFELQNEDEYDNNCLVDGRKRRRSSNFNLAWKKNFDLRWSKLTDTIQPVDWQQIYWETHLQSCLDEAAEIASLPSFS
        D++++L A  L   A  +  + +PFELQNEDEYDN CLVDGRKRRRSSNFNLAWKKNF+LRWSKLTD IQPVDWQQIYWE HLQSCLDEAAEIASLPSFS
Subjt:  DIIESLGAFSLLVCAFWSQLAFLPFELQNEDEYDNNCLVDGRKRRRSSNFNLAWKKNFDLRWSKLTDTIQPVDWQQIYWETHLQSCLDEAAEIASLPSFS

Query:  KCIGEIEMSDSILKYIASKESVHFWRAKYRYLSYHCQEFGCYAL
        KCIGEIEMSDSILKYIAS++S+HFWRAKYR LSYHCQEFGCYAL
Subjt:  KCIGEIEMSDSILKYIASKESVHFWRAKYRYLSYHCQEFGCYAL

XP_008461992.1 PREDICTED: uncharacterized protein LOC103500467 isoform X3 [Cucumis melo]2.3e-6181.94Show/hide
Query:  DIIESLGAFSLLVCAFWSQLAFLPFELQNEDEYDNNCLVDGRKRRRSSNFNLAWKKNFDLRWSKLTDTIQPVDWQQIYWETHLQSCLDEAAEIASLPSFS
        D++++L A  L   A  +  + +PFELQNEDEYDN CLVDGRKRRRSSNFNLAWKKNF+LRWSKLTD IQPVDWQQIYWE HLQSCLDEAAEIASLPSFS
Subjt:  DIIESLGAFSLLVCAFWSQLAFLPFELQNEDEYDNNCLVDGRKRRRSSNFNLAWKKNFDLRWSKLTDTIQPVDWQQIYWETHLQSCLDEAAEIASLPSFS

Query:  KCIGEIEMSDSILKYIASKESVHFWRAKYRYLSYHCQEFGCYAL
        KCIGEIEMSDSILKYIAS++S+HFWRAKYR LSYHCQEFGCYAL
Subjt:  KCIGEIEMSDSILKYIASKESVHFWRAKYRYLSYHCQEFGCYAL

XP_031744906.1 NACHT, LRR and PYD domains-containing protein 5 isoform X1 [Cucumis sativus]4.4e-6598.36Show/hide
Query:  LPFELQNEDEYDNNCLVDGRKRRRSSNFNLAWKKNFDLRWSKLTDTIQPVDWQQIYWETHLQSCLDEAAEIASLPSFSKCIGEIEMSDSILKYIASKESV
        +PFELQNEDEYDNNCL+DGRKRRRSSNFNLAWKKNFDLRWSKLTDTIQPVDWQQIYWETHLQSCLDEAAEIASLPSFSKCIGEIEMSDSILKYIASKESV
Subjt:  LPFELQNEDEYDNNCLVDGRKRRRSSNFNLAWKKNFDLRWSKLTDTIQPVDWQQIYWETHLQSCLDEAAEIASLPSFSKCIGEIEMSDSILKYIASKESV

Query:  HFWRAKYRYLSYHCQEFGCYAL
        HFWRAKYRYLSYHCQEFGCYAL
Subjt:  HFWRAKYRYLSYHCQEFGCYAL

TrEMBL top hitse value%identityAlignment
A0A0A0K4G5 Uncharacterized protein5.8e-5599.06Show/hide
Query:  VDGRKRRRSSNFNLAWKKNFDLRWSKLTDTIQPVDWQQIYWETHLQSCLDEAAEIASLPSFSKCIGEIEMSDSILKYIASKESVHFWRAKYRYLSYHCQE
        +DGRKRRRSSNFNLAWKKNFDLRWSKLTDTIQPVDWQQIYWETHLQSCLDEAAEIASLPSFSKCIGEIEMSDSILKYIASKESVHFWRAKYRYLSYHCQE
Subjt:  VDGRKRRRSSNFNLAWKKNFDLRWSKLTDTIQPVDWQQIYWETHLQSCLDEAAEIASLPSFSKCIGEIEMSDSILKYIASKESVHFWRAKYRYLSYHCQE

Query:  FGCYAL
        FGCYAL
Subjt:  FGCYAL

A0A1S3CFT7 uncharacterized protein LOC103500467 isoform X11.1e-6181.94Show/hide
Query:  DIIESLGAFSLLVCAFWSQLAFLPFELQNEDEYDNNCLVDGRKRRRSSNFNLAWKKNFDLRWSKLTDTIQPVDWQQIYWETHLQSCLDEAAEIASLPSFS
        D++++L A  L   A  +  + +PFELQNEDEYDN CLVDGRKRRRSSNFNLAWKKNF+LRWSKLTD IQPVDWQQIYWE HLQSCLDEAAEIASLPSFS
Subjt:  DIIESLGAFSLLVCAFWSQLAFLPFELQNEDEYDNNCLVDGRKRRRSSNFNLAWKKNFDLRWSKLTDTIQPVDWQQIYWETHLQSCLDEAAEIASLPSFS

Query:  KCIGEIEMSDSILKYIASKESVHFWRAKYRYLSYHCQEFGCYAL
        KCIGEIEMSDSILKYIAS++S+HFWRAKYR LSYHCQEFGCYAL
Subjt:  KCIGEIEMSDSILKYIASKESVHFWRAKYRYLSYHCQEFGCYAL

A0A1S3CFV1 uncharacterized protein LOC103500467 isoform X31.1e-6181.94Show/hide
Query:  DIIESLGAFSLLVCAFWSQLAFLPFELQNEDEYDNNCLVDGRKRRRSSNFNLAWKKNFDLRWSKLTDTIQPVDWQQIYWETHLQSCLDEAAEIASLPSFS
        D++++L A  L   A  +  + +PFELQNEDEYDN CLVDGRKRRRSSNFNLAWKKNF+LRWSKLTD IQPVDWQQIYWE HLQSCLDEAAEIASLPSFS
Subjt:  DIIESLGAFSLLVCAFWSQLAFLPFELQNEDEYDNNCLVDGRKRRRSSNFNLAWKKNFDLRWSKLTDTIQPVDWQQIYWETHLQSCLDEAAEIASLPSFS

Query:  KCIGEIEMSDSILKYIASKESVHFWRAKYRYLSYHCQEFGCYAL
        KCIGEIEMSDSILKYIAS++S+HFWRAKYR LSYHCQEFGCYAL
Subjt:  KCIGEIEMSDSILKYIASKESVHFWRAKYRYLSYHCQEFGCYAL

A0A1S3CFY9 uncharacterized protein LOC103500467 isoform X21.1e-6181.94Show/hide
Query:  DIIESLGAFSLLVCAFWSQLAFLPFELQNEDEYDNNCLVDGRKRRRSSNFNLAWKKNFDLRWSKLTDTIQPVDWQQIYWETHLQSCLDEAAEIASLPSFS
        D++++L A  L   A  +  + +PFELQNEDEYDN CLVDGRKRRRSSNFNLAWKKNF+LRWSKLTD IQPVDWQQIYWE HLQSCLDEAAEIASLPSFS
Subjt:  DIIESLGAFSLLVCAFWSQLAFLPFELQNEDEYDNNCLVDGRKRRRSSNFNLAWKKNFDLRWSKLTDTIQPVDWQQIYWETHLQSCLDEAAEIASLPSFS

Query:  KCIGEIEMSDSILKYIASKESVHFWRAKYRYLSYHCQEFGCYAL
        KCIGEIEMSDSILKYIAS++S+HFWRAKYR LSYHCQEFGCYAL
Subjt:  KCIGEIEMSDSILKYIASKESVHFWRAKYRYLSYHCQEFGCYAL

A0A5A7U5S5 Protein NLRC3 isoform X12.8e-6570.59Show/hide
Query:  MEGFAQSTGCDLYTLGK----KAFWFLGSALQLMSFGAYGWRGDIIESLGAFSLLVCAFWSQLAFLPFELQNEDEYDNNCLVDGRKRRRSSNFNLAWKKN
        M+GFAQ+TGC+L    +     +F  LGSA+         W G   +  G F+L   +    +   PFELQNEDEYDN CLVDGRKRRRSSNFNLAWKKN
Subjt:  MEGFAQSTGCDLYTLGK----KAFWFLGSALQLMSFGAYGWRGDIIESLGAFSLLVCAFWSQLAFLPFELQNEDEYDNNCLVDGRKRRRSSNFNLAWKKN

Query:  FDLRWSKLTDTIQPVDWQQIYWETHLQSCLDEAAEIASLPSFSKCIGEIEMSDSILKYIASKESVHFWRAKYRYLSYHCQEFGCYAL
        F+LRWSKLTD IQPVDWQQIYWE HLQSCLDEAAEIASLPSFSKCIGEIEMSDSILKYIAS++S+HFWRAKYR LSYHCQEFGCYAL
Subjt:  FDLRWSKLTDTIQPVDWQQIYWETHLQSCLDEAAEIASLPSFSKCIGEIEMSDSILKYIASKESVHFWRAKYRYLSYHCQEFGCYAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G20210.1 RNI-like superfamily protein1.7e-2244.72Show/hide
Query:  LPFE-LQNEDEYDNNCLVDGRKRRRSSNFNLAWKKNFDLRWSKLTDTIQ-PVDWQQIYWETHLQSCLDEAAEIASLPSFSKCIGEIEMSDSILKYIASKE
        +PF  L + +  D+ CL+ GRKR R+     +WK  F LRW    D ++ P DWQQ+YWE HLQ+C+DEAAE+A  P+FS  I  I +SD+IL+YI  +E
Subjt:  LPFE-LQNEDEYDNNCLVDGRKRRRSSNFNLAWKKNFDLRWSKLTDTIQ-PVDWQQIYWETHLQSCLDEAAEIASLPSFSKCIGEIEMSDSILKYIASKE

Query:  SVHFWR-AKYRYLSYHCQEFGCY
         +   +    + LS+H Q FG Y
Subjt:  SVHFWR-AKYRYLSYHCQEFGCY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGTTTTGCACAGTCCACAGGTTGTGACTTGTATACTCTTGGTAAGAAGGCGTTTTGGTTCTTGGGATCTGCTTTGCAGTTAATGTCCTTTGGAGCATATGGATG
GAGAGGAGACATAATTGAATCTTTAGGCGCCTTCTCTTTGTTGGTTTGTGCTTTCTGGTCCCAGTTAGCCTTCTTGCCATTTGAGCTCCAGAATGAGGATGAATATGATA
ACAATTGCCTTGTGGATGGTCGGAAGCGCAGAAGGTCCTCTAATTTTAATTTAGCATGGAAGAAGAATTTCGATTTACGATGGTCAAAGCTAACTGATACTATCCAGCCA
GTTGACTGGCAGCAGATATATTGGGAGACGCACTTGCAAAGTTGCCTAGATGAAGCAGCAGAAATAGCCTCACTACCATCTTTTTCTAAATGTATTGGAGAAATAGAGAT
GTCAGATTCTATATTGAAATATATTGCCAGCAAAGAGTCTGTTCATTTCTGGCGTGCAAAGTATAGATATTTAAGCTATCATTGCCAAGAATTTGGGTGCTATGCTCTAC
CAAAAGAACATATACACTATGCTCCAAAGGAGGCCTGCCAGAGAGGGGAAAACAAAGCTGTCAAAATACAAAACAAAGCCACCAAAACAGAACAGGGCCTAGGGGGCTGG
TTGAGAGATAAAGACTGCCCAGTTGAGACAAAGAACTTGAGTCAAGCTGCCAACCAAGGTATTTCCAATTGCAACAAAAGCAACCTTGCCAAAATCGGACGACTAGGGTC
CCTTGTTTGCAATCATGAACCCGTTTTCTCAATGTATACAACGGAGAGGCATTCTGTCATTTCGAGTAAAGGGTCTAAGTCGTATCCCACAGATCTTTTGATGTGGTTGC
ATACAGTAGAGGCTTGCCGATATGAGGTTCCATACTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGTTTTGCACAGTCCACAGGTTGTGACTTGTATACTCTTGGTAAGAAGGCGTTTTGGTTCTTGGGATCTGCTTTGCAGTTAATGTCCTTTGGAGCATATGGATG
GAGAGGAGACATAATTGAATCTTTAGGCGCCTTCTCTTTGTTGGTTTGTGCTTTCTGGTCCCAGTTAGCCTTCTTGCCATTTGAGCTCCAGAATGAGGATGAATATGATA
ACAATTGCCTTGTGGATGGTCGGAAGCGCAGAAGGTCCTCTAATTTTAATTTAGCATGGAAGAAGAATTTCGATTTACGATGGTCAAAGCTAACTGATACTATCCAGCCA
GTTGACTGGCAGCAGATATATTGGGAGACGCACTTGCAAAGTTGCCTAGATGAAGCAGCAGAAATAGCCTCACTACCATCTTTTTCTAAATGTATTGGAGAAATAGAGAT
GTCAGATTCTATATTGAAATATATTGCCAGCAAAGAGTCTGTTCATTTCTGGCGTGCAAAGTATAGATATTTAAGCTATCATTGCCAAGAATTTGGGTGCTATGCTCTAC
CAAAAGAACATATACACTATGCTCCAAAGGAGGCCTGCCAGAGAGGGGAAAACAAAGCTGTCAAAATACAAAACAAAGCCACCAAAACAGAACAGGGCCTAGGGGGCTGG
TTGAGAGATAAAGACTGCCCAGTTGAGACAAAGAACTTGAGTCAAGCTGCCAACCAAGGTATTTCCAATTGCAACAAAAGCAACCTTGCCAAAATCGGACGACTAGGGTC
CCTTGTTTGCAATCATGAACCCGTTTTCTCAATGTATACAACGGAGAGGCATTCTGTCATTTCGAGTAAAGGGTCTAAGTCGTATCCCACAGATCTTTTGATGTGGTTGC
ATACAGTAGAGGCTTGCCGATATGAGGTTCCATACTATTAA
Protein sequenceShow/hide protein sequence
MEGFAQSTGCDLYTLGKKAFWFLGSALQLMSFGAYGWRGDIIESLGAFSLLVCAFWSQLAFLPFELQNEDEYDNNCLVDGRKRRRSSNFNLAWKKNFDLRWSKLTDTIQP
VDWQQIYWETHLQSCLDEAAEIASLPSFSKCIGEIEMSDSILKYIASKESVHFWRAKYRYLSYHCQEFGCYALPKEHIHYAPKEACQRGENKAVKIQNKATKTEQGLGGW
LRDKDCPVETKNLSQAANQGISNCNKSNLAKIGRLGSLVCNHEPVFSMYTTERHSVISSKGSKSYPTDLLMWLHTVEACRYEVPYY