CuGenDBv2

Gene ID	CSPI07G13680
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Protein NLRC3 isoform X1
Genome location	Chr7:12201204..12204055
RNA-Seq Expression	CSPI07G13680
Synteny	CSPI07G13680
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR032675 - Leucine-rich repeat domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004139728.1 protein NLRC3 isoform X2 [Cucumis sativus]

2.9e-113

99.53

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Query:  MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSLSVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQD
        MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSLSVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQD
Subjt:  MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSLSVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQD

Query:  LVEGVTAGSNIVNINMSKNRGGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDDQKAQDSLVAEFQNSVKKILI
        LVEGVTAGSNIVNIN+SKNRGGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDDQKAQDSLVAEFQNSVKKILI
Subjt:  LVEGVTAGSNIVNINMSKNRGGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDDQKAQDSLVAEFQNSVKKILI

Query:  YSSSPNLDGLYDADP
        YSSSPNLDGLYDADP
Subjt:  YSSSPNLDGLYDADP

XP_008461989.1 PREDICTED: uncharacterized protein LOC103500467 isoform X1 [Cucumis melo]

9.7e-109

96.28

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Query:  MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSLSVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQD
        +SDNPIEDDGIRNLIPYFIEASER+ PFADLNLENCELSCDGVTQLLNVLSTLRKPLRSLSVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQD
Subjt:  MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSLSVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQD

Query:  LVEGVTAGSNIVNINMSKNRGGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDDQKAQDSLVAEFQNSVKKILI
        LVEGVT GSNIVNIN+SKNRGGIEIATFLLKLLSG SDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDDQKAQDSLVAEFQNSVKKILI
Subjt:  LVEGVTAGSNIVNINMSKNRGGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDDQKAQDSLVAEFQNSVKKILI

Query:  YSSSPNLDGLYDADP
        YSSSP LDGLYD DP
Subjt:  YSSSPNLDGLYDADP

XP_031744906.1 NACHT, LRR and PYD domains-containing protein 5 isoform X1 [Cucumis sativus]

2.9e-113

99.53

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Query:  MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSLSVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQD
        MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSLSVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQD
Subjt:  MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSLSVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQD

Query:  LVEGVTAGSNIVNINMSKNRGGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDDQKAQDSLVAEFQNSVKKILI
        LVEGVTAGSNIVNIN+SKNRGGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDDQKAQDSLVAEFQNSVKKILI
Subjt:  LVEGVTAGSNIVNINMSKNRGGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDDQKAQDSLVAEFQNSVKKILI

Query:  YSSSPNLDGLYDADP
        YSSSPNLDGLYDADP
Subjt:  YSSSPNLDGLYDADP

XP_038896792.1 uncharacterized protein LOC120085036 isoform X3 [Benincasa hispida]

1.0e-102

90.7

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Query:  MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSLSVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQD
        +SDNPIEDDGIRNLIPYFIEASER+ PFADLNLENCELSCDGVTQLLNVLSTLRKPLRSLSVADNSLGSSVAGALGVFM KSIQ+LNVEGIGLG CGF+D
Subjt:  MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSLSVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQD

Query:  LVEGVTAGSNIVNINMSKNRGGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDDQKAQDSLVAEFQNSVKKILI
        L+EGV  GSNIVNIN+SKNRGGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKG LELLDLRGNNWDDQ  +DSL+AEFQNS KKIL 
Subjt:  LVEGVTAGSNIVNINMSKNRGGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDDQKAQDSLVAEFQNSVKKILI

Query:  YSSSPNLDGLYDADP
        YSSSP LDGLYD DP
Subjt:  YSSSPNLDGLYDADP

XP_038896794.1 uncharacterized protein LOC120085036 isoform X5 [Benincasa hispida]

1.0e-102

90.7

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Query:  MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSLSVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQD
        +SDNPIEDDGIRNLIPYFIEASER+ PFADLNLENCELSCDGVTQLLNVLSTLRKPLRSLSVADNSLGSSVAGALGVFM KSIQ+LNVEGIGLG CGF+D
Subjt:  MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSLSVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQD

Query:  LVEGVTAGSNIVNINMSKNRGGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDDQKAQDSLVAEFQNSVKKILI
        L+EGV  GSNIVNIN+SKNRGGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKG LELLDLRGNNWDDQ  +DSL+AEFQNS KKIL 
Subjt:  LVEGVTAGSNIVNINMSKNRGGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDDQKAQDSLVAEFQNSVKKILI

Query:  YSSSPNLDGLYDADP
        YSSSP LDGLYD DP
Subjt:  YSSSPNLDGLYDADP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K4G5 Uncharacterized protein

1.4e-113

99.53

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Query:  MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSLSVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQD
        MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSLSVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQD
Subjt:  MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSLSVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQD

Query:  LVEGVTAGSNIVNINMSKNRGGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDDQKAQDSLVAEFQNSVKKILI
        LVEGVTAGSNIVNIN+SKNRGGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDDQKAQDSLVAEFQNSVKKILI
Subjt:  LVEGVTAGSNIVNINMSKNRGGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDDQKAQDSLVAEFQNSVKKILI

Query:  YSSSPNLDGLYDADP
        YSSSPNLDGLYDADP
Subjt:  YSSSPNLDGLYDADP

A0A1S3CFT7 uncharacterized protein LOC103500467 isoform X1

4.7e-109

96.28

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Query:  MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSLSVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQD
        +SDNPIEDDGIRNLIPYFIEASER+ PFADLNLENCELSCDGVTQLLNVLSTLRKPLRSLSVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQD
Subjt:  MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSLSVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQD

Query:  LVEGVTAGSNIVNINMSKNRGGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDDQKAQDSLVAEFQNSVKKILI
        LVEGVT GSNIVNIN+SKNRGGIEIATFLLKLLSG SDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDDQKAQDSLVAEFQNSVKKILI
Subjt:  LVEGVTAGSNIVNINMSKNRGGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDDQKAQDSLVAEFQNSVKKILI

Query:  YSSSPNLDGLYDADP
        YSSSP LDGLYD DP
Subjt:  YSSSPNLDGLYDADP

A0A6J1GQL7 uncharacterized protein LOC111456584 isoform X1

5.4e-97

86.05

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Query:  MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSLSVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQD
        +SDNPIEDDGIRNLIPYF+E SER+ PFADLNLENCELSCDGVTQLLNVL+TLRKPLRSLS+ADNSLGSSVA ALGVFM KSIQILNVEGIGLGPCGFQD
Subjt:  MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSLSVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQD

Query:  LVEGVTAGSNIVNINMSKNRGGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDDQKAQDSLVAEFQNSVKKILI
        L+EG+T GSNIVNIN+SKNRGGIEIATFLLKLL GASDLVSVNASYNLMPVESL IIRSALK AKG L+LLDL GNNWD QKA+DSL AEF++  +KILI
Subjt:  LVEGVTAGSNIVNINMSKNRGGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDDQKAQDSLVAEFQNSVKKILI

Query:  YSSSPNLDGLYDADP
         SSSP LDGLYD DP
Subjt:  YSSSPNLDGLYDADP

A0A6J1JTJ2 uncharacterized protein LOC111488203 isoform X1

1.1e-97

86.51

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Query:  MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSLSVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQD
        +SDNPIEDDGIRNLIPYF+E SER+ PFADLNLENCELSCDGVTQLLNVL+TLRKPLRSLS+ADNSLGSSVA ALGVFM KSIQILNVEGIGLGPCGFQD
Subjt:  MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSLSVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQD

Query:  LVEGVTAGSNIVNINMSKNRGGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDDQKAQDSLVAEFQNSVKKILI
        L+EG+T GSNIVNIN+SKNRGGIEIATFLLKLL GASDLVSVNASYNLMPVESL IIRSALK AKG L+LLDL GNNWD QKA DSL AEFQN  +KIL+
Subjt:  LVEGVTAGSNIVNINMSKNRGGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDDQKAQDSLVAEFQNSVKKILI

Query:  YSSSPNLDGLYDADP
         SSSP LDGLYD DP
Subjt:  YSSSPNLDGLYDADP

A0A6J1JWX3 uncharacterized protein LOC111488203 isoform X2

1.1e-97

86.51

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Query:  MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSLSVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQD
        +SDNPIEDDGIRNLIPYF+E SER+ PFADLNLENCELSCDGVTQLLNVL+TLRKPLRSLS+ADNSLGSSVA ALGVFM KSIQILNVEGIGLGPCGFQD
Subjt:  MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSLSVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQD

Query:  LVEGVTAGSNIVNINMSKNRGGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDDQKAQDSLVAEFQNSVKKILI
        L+EG+T GSNIVNIN+SKNRGGIEIATFLLKLL GASDLVSVNASYNLMPVESL IIRSALK AKG L+LLDL GNNWD QKA DSL AEFQN  +KIL+
Subjt:  LVEGVTAGSNIVNINMSKNRGGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDDQKAQDSLVAEFQNSVKKILI

Query:  YSSSPNLDGLYDADP
         SSSP LDGLYD DP
Subjt:  YSSSPNLDGLYDADP

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G20210.1 RNI-like superfamily protein

2.8e-45

49.31

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Query:  MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSLSVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQD
        +S NPIED GIR+LI YF +  +     ADLNLENCELSC GV + L+ LS L KPL+ LSVADN+LGS VA A+      SI+ LN+ GIGLGP GF  
Subjt:  MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSLSVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQD

Query:  LVEGV-TAGSNIVNINMSKNRGGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDDQKA-QDSLVAEFQNSVKKI
        L   +      +++IN+SKNRGG+E A FL KL+  A  L+S++ASYNLMP E+L ++  +L+ AKG L+ LD+ GN+    +A   SL+ EFQ++ + I
Subjt:  LVEGV-TAGSNIVNINMSKNRGGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDDQKA-QDSLVAEFQNSVKKI

Query:  LIYSSSPNLDGLYDADP
         +  SS      YD DP
Subjt:  LIYSSSPNLDGLYDADP

Sequences

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CDS sequence

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ATGAGTGATAATCCTATTGAGGATGATGGAATCAGGAATTTAATCCCCTATTTTATTGAAGCTTCTGAAAGAAACTGTCCCTTTGCTGATCTGAATTTAGAGAACTGTGA
GCTTTCATGTGATGGAGTCACGCAACTCTTGAATGTGCTGTCAACTTTAAGGAAACCACTGAGGTCTCTTTCTGTTGCAGATAATAGCCTTGGAAGCTCGGTAGCAGGAG
CTTTGGGCGTTTTCATGGGGAAATCAATTCAAATACTGAATGTTGAAGGCATTGGCTTGGGTCCATGTGGGTTTCAGGATTTAGTTGAAGGGGTAACTGCAGGGTCAAAT
ATTGTGAACATCAACATGAGTAAAAATCGTGGTGGAATAGAGATAGCAACATTTTTGTTGAAGCTTTTGTCTGGGGCATCAGATCTTGTTTCTGTCAATGCATCTTACAA
TCTAATGCCCGTTGAATCCTTAGACATCATACGTTCTGCCCTGAAAATTGCTAAAGGTAAACTTGAGCTATTGGACTTGAGGGGAAATAATTGGGATGATCAAAAGGCTC
AAGATTCACTGGTTGCAGAGTTTCAGAACAGTGTCAAGAAAATTTTAATATATTCATCATCACCAAATTTAGATGGACTTTATGACGCCGATCCAAATAGGACCTTCTGT
GTCAGACCCTTGCCACCAATTATTGTGGCTGAATGTGCTTTGAAGATGTTCTCTCATGTAGATGAATGGGAAGATGAAATTTCTGCTTTGGGGAGTGCAGTTGCAACCAA
GGAAACTCCTAAACCTTTGTGGACTTCTGTGTGCTAG

mRNA sequence

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Protein sequence

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MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSLSVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQDLVEGVTAGSN
IVNINMSKNRGGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDDQKAQDSLVAEFQNSVKKILIYSSSPNLDGLYDADPNRTFC
VRPLPPIIVAECALKMFSHVDEWEDEISALGSAVATKETPKPLWTSVC

CSPI07G13680 (gene) of Cucumber (PI 183967) v1 genome