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CSPI07G13880 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G13880
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionLOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g23330
Genome locationChr7:12398310..12398662
RNA-Seq ExpressionCSPI07G13880
SyntenyCSPI07G13880
Gene Ontology termsGO:0032468 - Golgi calcium ion homeostasis (biological process)
GO:0032472 - Golgi calcium ion transport (biological process)
GO:0070588 - calcium ion transmembrane transport (biological process)
GO:0071421 - manganese ion transmembrane transport (biological process)
GO:0005794 - Golgi apparatus (cellular component)
GO:0016020 - membrane (cellular component)
GO:0005384 - manganese ion transmembrane transporter activity (molecular function)
GO:0015085 - calcium ion transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646234.1 hypothetical protein Csa_016443 [Cucumis sativus]1.6e-2897.06Show/hide
Query:  MGLRSNPTATLSLLLF-SSFFFPLFASVQVYSAEVEKDDLDGPKDLGRCSKVSTIPCRPWLEVGLGLY
        MGLRSNPTATLSLLLF SSFFFPLFASVQVYSAEVEKD+LDGPKDLGRCSKVSTIPCRPWLEVGLGLY
Subjt:  MGLRSNPTATLSLLLF-SSFFFPLFASVQVYSAEVEKDDLDGPKDLGRCSKVSTIPCRPWLEVGLGLY

KGN61261.1 hypothetical protein Csa_006241 [Cucumis sativus]5.8e-1074.55Show/hide
Query:  MGLRSNPTATLSL---LLFSSFFFPLFASVQVYSAEVEKDDLDGPKDLGRCSKVS
        MGLRSNPTATLS     L    F  LFAS QVYSAEVEKDDLDGPKDLGR SK+S
Subjt:  MGLRSNPTATLSL---LLFSSFFFPLFASVQVYSAEVEKDDLDGPKDLGRCSKVS

XP_008441858.1 PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g23330 [Cucumis melo]8.4e-0967.27Show/hide
Query:  MGLRSNPTATLSL---LLFSSFFFPLFASVQVYSAEVEKDDLDGPKDLGRCSKVS
        MGLRSNPT TLS     L       LFAS+QVYSAE EKD+LDGPKDLGR SK+S
Subjt:  MGLRSNPTATLSL---LLFSSFFFPLFASVQVYSAEVEKDDLDGPKDLGRCSKVS

XP_011648996.1 LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g23330 [Cucumis sativus]5.8e-1074.55Show/hide
Query:  MGLRSNPTATLSL---LLFSSFFFPLFASVQVYSAEVEKDDLDGPKDLGRCSKVS
        MGLRSNPTATLS     L    F  LFAS QVYSAEVEKDDLDGPKDLGR SK+S
Subjt:  MGLRSNPTATLSL---LLFSSFFFPLFASVQVYSAEVEKDDLDGPKDLGRCSKVS

XP_038889550.1 GDT1-like protein 4 [Benincasa hispida]2.9e-0970.69Show/hide
Query:  MGLRSNPTATLSLLLFSSFF------FPLFASVQVYSAEVEKDDLDGPKDLGRCSKVS
        MGLRSNPTA LS   FSS F        LFAS+QVYSAEVEKD+LDGPKDLGR SK+S
Subjt:  MGLRSNPTATLSLLLFSSFF------FPLFASVQVYSAEVEKDDLDGPKDLGRCSKVS

TrEMBL top hitse value%identityAlignment
A0A0A0K4H3 Uncharacterized protein8.2e-1896.23Show/hide
Query:  MGLRSNPTATLSLLLF-SSFFFPLFASVQVYSAEVEKDDLDGPKDLGRCSKVS
        MGLRSNPTATLSLLLF SSFFFPLFASVQVYSAEVEKDDLDGPKDLGRCSK S
Subjt:  MGLRSNPTATLSLLLF-SSFFFPLFASVQVYSAEVEKDDLDGPKDLGRCSKVS

A0A0A0LMQ4 GDT1 family protein2.8e-1074.55Show/hide
Query:  MGLRSNPTATLSL---LLFSSFFFPLFASVQVYSAEVEKDDLDGPKDLGRCSKVS
        MGLRSNPTATLS     L    F  LFAS QVYSAEVEKDDLDGPKDLGR SK+S
Subjt:  MGLRSNPTATLSL---LLFSSFFFPLFASVQVYSAEVEKDDLDGPKDLGRCSKVS

A0A1S3B4E3 LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g233304.1e-0967.27Show/hide
Query:  MGLRSNPTATLSL---LLFSSFFFPLFASVQVYSAEVEKDDLDGPKDLGRCSKVS
        MGLRSNPT TLS     L       LFAS+QVYSAE EKD+LDGPKDLGR SK+S
Subjt:  MGLRSNPTATLSL---LLFSSFFFPLFASVQVYSAEVEKDDLDGPKDLGRCSKVS

A0A5A7U3P6 GDT1 family protein4.1e-0967.27Show/hide
Query:  MGLRSNPTATLSL---LLFSSFFFPLFASVQVYSAEVEKDDLDGPKDLGRCSKVS
        MGLRSNPT TLS     L       LFAS+QVYSAE EKD+LDGPKDLGR SK+S
Subjt:  MGLRSNPTATLSL---LLFSSFFFPLFASVQVYSAEVEKDDLDGPKDLGRCSKVS

A0A6J1KA70 putative pentatricopeptide repeat-containing protein At3g233309.1e-0967.27Show/hide
Query:  MGLRSNPTATLSL---LLFSSFFFPLFASVQVYSAEVEKDDLDGPKDLGRCSKVS
        MGLRSNPT  LS    L+       LFASVQVYSAEVEK++LDGPKDLGR SK+S
Subjt:  MGLRSNPTATLSL---LLFSSFFFPLFASVQVYSAEVEKDDLDGPKDLGRCSKVS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTGCGTTCAAACCCTACTGCAACCCTCTCTCTTCTTCTTTTCTCCTCTTTCTTCTTCCCTCTCTTTGCCTCCGTTCAGGTGTATTCTGCGGAAGTGGAGAAAGA
TGACTTGGATGGACCTAAAGATCTCGGTCGATGTAGCAAGGTCAGTACGATTCCTTGTCGGCCATGGCTAGAGGTTGGTTTGGGGTTATATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTGCGTTCAAACCCTACTGCAACCCTCTCTCTTCTTCTTTTCTCCTCTTTCTTCTTCCCTCTCTTTGCCTCCGTTCAGGTGTATTCTGCGGAAGTGGAGAAAGA
TGACTTGGATGGACCTAAAGATCTCGGTCGATGTAGCAAGGTCAGTACGATTCCTTGTCGGCCATGGCTAGAGGTTGGTTTGGGGTTATATTGAGATTGAGATCTTTGTG
CTTTTTGACTTAATAGTTTTCCTTCTTGTACATTGTTAATAGAAC
Protein sequenceShow/hide protein sequence
MGLRSNPTATLSLLLFSSFFFPLFASVQVYSAEVEKDDLDGPKDLGRCSKVSTIPCRPWLEVGLGLY