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CSPI07G13930 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G13930
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionGlycine-rich cell wall structural protein 1-like
Genome locationChr7:12438141..12438823
RNA-Seq ExpressionCSPI07G13930
SyntenyCSPI07G13930
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050569.1 glycine-rich cell wall structural protein 1-like [Cucumis melo var. makuwa]4.6e-3891.3Show/hide
Query:  MAKLFIALLLALVATHALARPITPGTTFDDQKNFLTYGGLGGYSGIGSNGLPFGGMGGVIGGTGPGGLGGGLGGATGIGGLGGPGGGAAGGLGS----GA
        MAKLFIALLLAL+ATHALARPITPGTTFDDQKNFLTYGGLGGYSGIGSNGLPFGG+GGV+GGTGPGGLGGGLGGATGIGGLGG GGGAAGGLGS    GA
Subjt:  MAKLFIALLLALVATHALARPITPGTTFDDQKNFLTYGGLGGYSGIGSNGLPFGGMGGVIGGTGPGGLGGGLGGATGIGGLGGPGGGAAGGLGS----GA

Query:  GGGVGIGGGSGLANP
        GGGVG+GGGSGL NP
Subjt:  GGGVGIGGGSGLANP

KAE8646238.1 hypothetical protein Csa_015546 [Cucumis sativus]3.0e-3792.79Show/hide
Query:  MAKLFIALLLALVATHALARPITPGTTFDDQKNFLTYGGLGGYSGIGSNGLPFGGMGGVIGGTGPGGLGGGLGGATGIGGLGGPGGGAAGGLGSGAGGGV
        MAKLFIALLLALVATHALARPITPGTTFDDQKNFLTYGGLGGYSGIGSNGLPFGGMGGVIGGTGPGGLGGGLGGATGI       GGAAGGLGSGAGGGV
Subjt:  MAKLFIALLLALVATHALARPITPGTTFDDQKNFLTYGGLGGYSGIGSNGLPFGGMGGVIGGTGPGGLGGGLGGATGIGGLGGPGGGAAGGLGSGAGGGV

Query:  GIGGGSGLANP
        GIGGGSGL NP
Subjt:  GIGGGSGLANP

XP_008462002.1 PREDICTED: glycine-rich cell wall structural protein 1-like [Cucumis melo]1.0e-3790.43Show/hide
Query:  MAKLFIALLLALVATHALARPITPGTTFDDQKNFLTYGGLGGYSGIGSNGLPFGGMGGVIGGTGPGGLGGGLGGATGIGGLGGPGGGAAGGLGS----GA
        MAKLF+ALLLAL+ATHALARPITPGTTFDDQKNFLTYGGLGGYSGIGSNGLPFGG+GGV+GGTGPGGLGGGLGGATGIGGLGG GGGAAGGLGS    GA
Subjt:  MAKLFIALLLALVATHALARPITPGTTFDDQKNFLTYGGLGGYSGIGSNGLPFGGMGGVIGGTGPGGLGGGLGGATGIGGLGGPGGGAAGGLGS----GA

Query:  GGGVGIGGGSGLANP
        GGGVG+GGGSGL NP
Subjt:  GGGVGIGGGSGLANP

XP_011659167.2 glycine-rich protein 5 [Cucumis sativus]9.0e-4299.1Show/hide
Query:  MAKLFIALLLALVATHALARPITPGTTFDDQKNFLTYGGLGGYSGIGSNGLPFGGMGGVIGGTGPGGLGGGLGGATGIGGLGGPGGGAAGGLGSGAGGGV
        MAKLFIALLLALVATHALARPITPGTTFDDQKNFLTYGGLGGYSGIGSNGLPFGGMGGVIGGTGPGGLGGGLGGATGIGGLGGPGGGAAGGLGSGAGGGV
Subjt:  MAKLFIALLLALVATHALARPITPGTTFDDQKNFLTYGGLGGYSGIGSNGLPFGGMGGVIGGTGPGGLGGGLGGATGIGGLGGPGGGAAGGLGSGAGGGV

Query:  GIGGGSGLANP
        GIGGGSGL NP
Subjt:  GIGGGSGLANP

XP_038899239.1 glycine-rich protein 5-like [Benincasa hispida]2.7e-3083.62Show/hide
Query:  MAKLFIALLLALVATHALARPITPGTTFDDQKNFLTYGGLGGYSGIGSNGLPFGGMGGVIGGTG-PGGLGGGLGGATGIGGLGGPGGGAAGGLGSGAGG-
        MAKLF+ALLLALVATHALARP TP TTF+DQKNFLTYGGLG YSGIGSNGLPFGG+GG +GGTG  GGLGGGLGGATG+GGLGG GGGAAGGLG GAGG 
Subjt:  MAKLFIALLLALVATHALARPITPGTTFDDQKNFLTYGGLGGYSGIGSNGLPFGGMGGVIGGTG-PGGLGGGLGGATGIGGLGGPGGGAAGGLGSGAGG-

Query:  ---GVGIGGGSGLANP
           GVG+GGGSGL NP
Subjt:  ---GVGIGGGSGLANP

TrEMBL top hitse value%identityAlignment
A0A0A0K6P3 Uncharacterized protein4.4e-4299.1Show/hide
Query:  MAKLFIALLLALVATHALARPITPGTTFDDQKNFLTYGGLGGYSGIGSNGLPFGGMGGVIGGTGPGGLGGGLGGATGIGGLGGPGGGAAGGLGSGAGGGV
        MAKLFIALLLALVATHALARPITPGTTFDDQKNFLTYGGLGGYSGIGSNGLPFGGMGGVIGGTGPGGLGGGLGGATGIGGLGGPGGGAAGGLGSGAGGGV
Subjt:  MAKLFIALLLALVATHALARPITPGTTFDDQKNFLTYGGLGGYSGIGSNGLPFGGMGGVIGGTGPGGLGGGLGGATGIGGLGGPGGGAAGGLGSGAGGGV

Query:  GIGGGSGLANP
        GIGGGSGL NP
Subjt:  GIGGGSGLANP

A0A1S3CFV5 glycine-rich cell wall structural protein 1-like5.0e-3890.43Show/hide
Query:  MAKLFIALLLALVATHALARPITPGTTFDDQKNFLTYGGLGGYSGIGSNGLPFGGMGGVIGGTGPGGLGGGLGGATGIGGLGGPGGGAAGGLGS----GA
        MAKLF+ALLLAL+ATHALARPITPGTTFDDQKNFLTYGGLGGYSGIGSNGLPFGG+GGV+GGTGPGGLGGGLGGATGIGGLGG GGGAAGGLGS    GA
Subjt:  MAKLFIALLLALVATHALARPITPGTTFDDQKNFLTYGGLGGYSGIGSNGLPFGGMGGVIGGTGPGGLGGGLGGATGIGGLGGPGGGAAGGLGS----GA

Query:  GGGVGIGGGSGLANP
        GGGVG+GGGSGL NP
Subjt:  GGGVGIGGGSGLANP

A0A5D3D5H6 Glycine-rich cell wall structural protein 1-like2.2e-3891.3Show/hide
Query:  MAKLFIALLLALVATHALARPITPGTTFDDQKNFLTYGGLGGYSGIGSNGLPFGGMGGVIGGTGPGGLGGGLGGATGIGGLGGPGGGAAGGLGS----GA
        MAKLFIALLLAL+ATHALARPITPGTTFDDQKNFLTYGGLGGYSGIGSNGLPFGG+GGV+GGTGPGGLGGGLGGATGIGGLGG GGGAAGGLGS    GA
Subjt:  MAKLFIALLLALVATHALARPITPGTTFDDQKNFLTYGGLGGYSGIGSNGLPFGGMGGVIGGTGPGGLGGGLGGATGIGGLGGPGGGAAGGLGS----GA

Query:  GGGVGIGGGSGLANP
        GGGVG+GGGSGL NP
Subjt:  GGGVGIGGGSGLANP

A0A6J1H8T3 acanthoscurrin-1-like2.9e-2262.88Show/hide
Query:  MAKLFIALLLALVATHALARPITPGTTFDDQKNFLTYGGLGGYSGIGSNGLPFGGMGGVIGGTGPGGLGGGLGGATGIGGLGGP----------------
        MAKLF+A+LLAL+ATHALARP     TF DQKNFLTYGGLGGYSGIGSNGLPFGG+GG +GGTGPGG+GGG+GG  G GG GG                 
Subjt:  MAKLFIALLLALVATHALARPITPGTTFDDQKNFLTYGGLGGYSGIGSNGLPFGGMGGVIGGTGPGGLGGGLGGATGIGGLGGP----------------

Query:  --------GGGAAGGLGSGAGGGVGIGGGSGL
                GG   GGLG G GGGVG GGGSGL
Subjt:  --------GGGAAGGLGSGAGGGVGIGGGSGL

A0A6J1KVV3 acanthoscurrin-1-like1.0e-2273.83Show/hide
Query:  MAKLFIALLLALVATHALARPITPGTTFDDQKNFLTYGGLGGYSGIGSNGLPFGGMGGVIGGTGPGGLGGGLGGATGIGGLGGPGGGAAGGLGSGAGGGV
        MAKLF+A+LLAL+ATHALARP     TF DQKNFLTYGGLGGYSGIGSNGLPFGG+GG +GGTGPGG+GGG+G   G+GG GG G G  GGLG G GGG+
Subjt:  MAKLFIALLLALVATHALARPITPGTTFDDQKNFLTYGGLGGYSGIGSNGLPFGGMGGVIGGTGPGGLGGGLGGATGIGGLGGPGGGAAGGLGSGAGGGV

Query:  GIGGGSG
        G GGG G
Subjt:  GIGGGSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G32690.2 glycine-rich protein 236.1e-0464.38Show/hide
Query:  GGLGGYSGIGSNGLPFGGMGGVIGGTGPGGLGGGLGGATGIGGLGGPGGGAAGGLGSGAGGGV--GIGGGSGL
        GGLGG SG+G  G   GG+GG  GG   GG GGGLGG  GIGG GG GGG  GG G GAGGG   GIGGG GL
Subjt:  GGLGGYSGIGSNGLPFGGMGGVIGGTGPGGLGGGLGGATGIGGLGGPGGGAAGGLGSGAGGGV--GIGGGSGL

AT4G29030.1 Putative membrane lipoprotein5.9e-0755.45Show/hide
Query:  MAKLFIALLLALVATHAL---ARPITPGTTFDDQKNFLTYGGLGGYSGIGSNGLPFGGMGGVIGGTGPGGLG-GGLGGATGIGGLGGPGGGAAGGLGSGA
        MAK F  + L      AL   AR +  G    DQKN+L YG  GGYSG+G NGLPFGG+GG + G G G LG GG GGA G G  GG GGGA  GLG G 
Subjt:  MAKLFIALLLALVATHAL---ARPITPGTTFDDQKNFLTYGGLGGYSGIGSNGLPFGGMGGVIGGTGPGGLG-GGLGGATGIGGLGGPGGGAAGGLGSGA

Query:  GGGVGIGGGS
        GGG GIG G+
Subjt:  GGGVGIGGGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCACACCTCCATTGGTCAACAACACATACAAAACACACAACTGTAAGTCTCCTAGACGAAGAATTAAGAAGAAGAAAATGGCCAAATTGTTCATTGCTTTGCTCCT
CGCTCTTGTAGCCACTCATGCCCTAGCTAGACCTATTACGCCGGGCACCACCTTCGACGACCAAAAGAACTTCCTCACTTACGGTGGCCTCGGTGGCTACTCTGGCATTG
GCAGCAATGGCCTCCCCTTTGGTGGGATGGGAGGTGTCATTGGAGGAACTGGGCCCGGTGGTCTCGGTGGTGGCCTCGGTGGCGCTACTGGAATCGGTGGACTTGGAGGC
CCGGGAGGTGGAGCTGCCGGTGGACTCGGAAGCGGAGCTGGTGGTGGAGTTGGTATTGGCGGTGGTTCTGGTCTTGCTAATCCTTGA
mRNA sequenceShow/hide mRNA sequence
CAGCATTTAACCTCACATTTACTTCTCTCAACTGTCCCTCAACTCTCTTTCCCCTTTAAAACCCTATGCTCACACCTCCATTGGTCAACAACACATACAAAACACACAAC
TGTAAGTCTCCTAGACGAAGAATTAAGAAGAAGAAAATGGCCAAATTGTTCATTGCTTTGCTCCTCGCTCTTGTAGCCACTCATGCCCTAGCTAGACCTATTACGCCGGG
CACCACCTTCGACGACCAAAAGAACTTCCTCACTTACGGTGGCCTCGGTGGCTACTCTGGCATTGGCAGCAATGGCCTCCCCTTTGGTGGGATGGGAGGTGTCATTGGAG
GAACTGGGCCCGGTGGTCTCGGTGGTGGCCTCGGTGGCGCTACTGGAATCGGTGGACTTGGAGGCCCGGGAGGTGGAGCTGCCGGTGGACTCGGAAGCGGAGCTGGTGGT
GGAGTTGGTATTGGCGGTGGTTCTGGTCTTGCTAATCCTTGAAGTTATTTTAATCTCGTTTTATTTCTACTCAAAACGTTGTTAGAGTGTGAAGTTTAGTTATTTTAATT
TGCCTTAAGTGGACTAGTATGAATCTATGCATTTGTTATGTTTTCTTTCTTTAGTTCATCAGAATTTCATAAAAATTTATTGTTTGATGTTATGCTAACTCTACGTTGTT
TTTAGTTGATTTTTAAATTGCCC
Protein sequenceShow/hide protein sequence
MLTPPLVNNTYKTHNCKSPRRRIKKKKMAKLFIALLLALVATHALARPITPGTTFDDQKNFLTYGGLGGYSGIGSNGLPFGGMGGVIGGTGPGGLGGGLGGATGIGGLGG
PGGGAAGGLGSGAGGGVGIGGGSGLANP