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CSPI07G13990 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G13990
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionChromo domain-containing protein
Genome locationChr7:12529988..12530695
RNA-Seq ExpressionCSPI07G13990
SyntenyCSPI07G13990
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041148.1 hypothetical protein E6C27_scaffold128G00680 [Cucumis melo var. makuwa]2.7e-0445.71Show/hide
Query:  SPCLDLKFTFNQRHASYLEFPPPSRHIQTF-----------------------LKPGIHIQPALHELPRI
        SPC DL FT NQ H SYL FPP S HIQ+F                        + GIH QPA HELP I
Subjt:  SPCLDLKFTFNQRHASYLEFPPPSRHIQTF-----------------------LKPGIHIQPALHELPRI
TrEMBL top hitse value%identityAlignment
A0A5A7TDW2 Chromo domain-containing protein1.3e-0445.71Show/hide
Query:  SPCLDLKFTFNQRHASYLEFPPPSRHIQTF-----------------------LKPGIHIQPALHELPRI
        SPC DL FT NQ H SYL FPP S HIQ+F                        + GIH QPA HELP I
Subjt:  SPCLDLKFTFNQRHASYLEFPPPSRHIQTF-----------------------LKPGIHIQPALHELPRI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCTTACCAACTAGCTACTTAAACGCAAGAGAAGATGACATGGTTATCATGCCGCATAGAAAAGCAACAGGTGCAGACAATAACAAGGTCAAAACGCAAACATATAG
TTATCATAGCATCAAGCCATATAAAACAAATCACCATCACAACAAGTGCTACAAGCTCCACGCACTTAAAACATCACGCATTTCATACTCATCCCCTTGCCTAGACCTGA
AATTCACATTCAACCAGCGTCATGCGAGTTACCTAGAATTTCCACCACCATCTCGTCACATTCAAACTTTTCTCAAACCTGGGATTCACATTCAACCAGCGTTACATGAG
TTACCTAGAATTTCTACCAACGTCTCGTCACATTCAAACTTTTCTCAGACCTGGGATTCAAATTCAACTAGTGTCTCATACATCACTCCTCGCCTAGACCTAGGATTCTC
CCCTCGTTATGACTTGAAATTCACACTCGACCAGTGTCACGCAAGTTACCTGGAATTTCCACCAGTGTCTAGCGTCAATAATACATCACAAGTACTCGTCTCGACTTGGG
ATTCTCCCCTTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGCTTACCAACTAGCTACTTAAACGCAAGAGAAGATGACATGGTTATCATGCCGCATAGAAAAGCAACAGGTGCAGACAATAACAAGGTCAAAACGCAAACATATAG
TTATCATAGCATCAAGCCATATAAAACAAATCACCATCACAACAAGTGCTACAAGCTCCACGCACTTAAAACATCACGCATTTCATACTCATCCCCTTGCCTAGACCTGA
AATTCACATTCAACCAGCGTCATGCGAGTTACCTAGAATTTCCACCACCATCTCGTCACATTCAAACTTTTCTCAAACCTGGGATTCACATTCAACCAGCGTTACATGAG
TTACCTAGAATTTCTACCAACGTCTCGTCACATTCAAACTTTTCTCAGACCTGGGATTCAAATTCAACTAGTGTCTCATACATCACTCCTCGCCTAGACCTAGGATTCTC
CCCTCGTTATGACTTGAAATTCACACTCGACCAGTGTCACGCAAGTTACCTGGAATTTCCACCAGTGTCTAGCGTCAATAATACATCACAAGTACTCGTCTCGACTTGGG
ATTCTCCCCTTGCTTGA
Protein sequenceShow/hide protein sequence
MRLPTSYLNAREDDMVIMPHRKATGADNNKVKTQTYSYHSIKPYKTNHHHNKCYKLHALKTSRISYSSPCLDLKFTFNQRHASYLEFPPPSRHIQTFLKPGIHIQPALHE
LPRISTNVSSHSNFSQTWDSNSTSVSYITPRLDLGFSPRYDLKFTLDQCHASYLEFPPVSSVNNTSQVLVSTWDSPLA