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CSPI07G14100 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G14100
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionThylakoid protein sll1769
Genome locationChr7:12583196..12586558
RNA-Seq ExpressionCSPI07G14100
SyntenyCSPI07G14100
Gene Ontology termsGO:0010027 - thylakoid membrane organization (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
InterPro domainsIPR040003 - Plastoglobular protein 18-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575973.1 putative protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.9e-5371.27Show/hide
Query:  MSSGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLS
        MSSGV SSVS S FS+V TK KITH S  SL+ FRSSST SNLKFR      PNG  RF+A CSSGDGD+RTVLDAFFLGKA AE LTER+EST+GEVLS
Subjt:  MSSGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLS

Query:  GIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTS-------SSPDADSESVVNQDP
         IGRLQAE+Q+QI DFQ+EVI+RAKKAKEKA RD+KE QGP+SSS+IS  IEV SSPT+       SSP+A SE+VVNQDP
Subjt:  GIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTS-------SSPDADSESVVNQDP

XP_004139667.1 uncharacterized protein At4g13200, chloroplastic [Cucumis sativus]1.5e-86100Show/hide
Query:  MSSGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLS
        MSSGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLS
Subjt:  MSSGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLS

Query:  GIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTSSSPDADSESVVNQDPSLGE
        GIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTSSSPDADSESVVNQDPSLGE
Subjt:  GIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTSSSPDADSESVVNQDPSLGE

XP_008447268.1 PREDICTED: uncharacterized protein At4g13200, chloroplastic isoform X1 [Cucumis melo]1.4e-7489.33Show/hide
Query:  MSSGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLS
        MSS +TSSVS SPFSLV TKPKITHYS PSLL FRSSSTPSNL+FRGISHFQPNG SR LARCSSGDGDSRT+LDAFFLGKALAEALTERIESTIGEVLS
Subjt:  MSSGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLS

Query:  GIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTSSSPDADSESVVNQDPSLGE
        GIG+LQAEQQKQITDFQDEVIERAKKAKEKAAR++KEVQ PVSSSVISP IEV SSPTSSSPDADSES VNQDP LG+
Subjt:  GIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTSSSPDADSESVVNQDPSLGE

XP_022953678.1 uncharacterized protein At4g13200, chloroplastic-like [Cucurbita moschata]3.5e-5469.73Show/hide
Query:  MSSGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLS
        MSSGV SSVS S FS+V TK KITH S PSL+ FRSSST SNLKFR      PNG  RF+A CSSGDGD+RTVLDAFF+GKA AE LTER+EST+GEVL 
Subjt:  MSSGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLS

Query:  GIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTS-------SSPDADSESVVNQDPSLGE
         IGRLQAE+Q+QI DFQ+EVI+RAKKAKEKA RD+KE QGP+SSS+IS  IEV SSPT+       SSP+A SE+VVNQDP  G+
Subjt:  GIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTS-------SSPDADSESVVNQDPSLGE

XP_038900031.1 uncharacterized protein At4g13200, chloroplastic [Benincasa hispida]7.5e-7384.86Show/hide
Query:  MSSGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLS
        MSSGVTSSVSQSPFSLV TKPKITHYS  SLLLFRSSSTPSNLKFR ISHFQPNG  RF+ARCSSGDGDSRTVLDAFFLGKALAEALTERIEST+GEVLS
Subjt:  MSSGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLS

Query:  GIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTS-------SSPDADSESVVNQDPSLGE
        GIGRLQAEQQKQITDFQ+EVIERAKKAK+KAARD+KEVQGPVSSS+ SP IEV SSPT        S+PD DSE+VVNQDP LG+
Subjt:  GIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTS-------SSPDADSESVVNQDPSLGE

TrEMBL top hitse value%identityAlignment
A0A0A0K6Q2 Uncharacterized protein7.5e-87100Show/hide
Query:  MSSGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLS
        MSSGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLS
Subjt:  MSSGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLS

Query:  GIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTSSSPDADSESVVNQDPSLGE
        GIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTSSSPDADSESVVNQDPSLGE
Subjt:  GIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTSSSPDADSESVVNQDPSLGE

A0A1S3BHX5 uncharacterized protein At4g13200, chloroplastic isoform X16.6e-7589.33Show/hide
Query:  MSSGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLS
        MSS +TSSVS SPFSLV TKPKITHYS PSLL FRSSSTPSNL+FRGISHFQPNG SR LARCSSGDGDSRT+LDAFFLGKALAEALTERIESTIGEVLS
Subjt:  MSSGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLS

Query:  GIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTSSSPDADSESVVNQDPSLGE
        GIG+LQAEQQKQITDFQDEVIERAKKAKEKAAR++KEVQ PVSSSVISP IEV SSPTSSSPDADSES VNQDP LG+
Subjt:  GIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTSSSPDADSESVVNQDPSLGE

A0A6J1DJG4 uncharacterized protein At4g13200, chloroplastic9.2e-5368.11Show/hide
Query:  SGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARC---------SSGDGDSRTVLDAFFLGKALAEALTERIES
        SG+ +SVS SPFSL+ TKPK TH+S P+L + RS STPSNLK RGI HF PN   R  ARC          SGDGDSRTVLDAFFLGKALAEALTERIES
Subjt:  SGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARC---------SSGDGDSRTVLDAFFLGKALAEALTERIES

Query:  TIGEVLSGIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTS--SSPDADSESVVNQDPSL
        T+GEVLSGIGRLQAE+QKQI DFQ+EVIERAK+AK+KAARDS EVQ P+S S+ SP I V S+     S PD  SES VN DP L
Subjt:  TIGEVLSGIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTS--SSPDADSESVVNQDPSL

A0A6J1GNZ1 uncharacterized protein At4g13200, chloroplastic-like1.7e-5469.73Show/hide
Query:  MSSGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLS
        MSSGV SSVS S FS+V TK KITH S PSL+ FRSSST SNLKFR      PNG  RF+A CSSGDGD+RTVLDAFF+GKA AE LTER+EST+GEVL 
Subjt:  MSSGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLS

Query:  GIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTS-------SSPDADSESVVNQDPSLGE
         IGRLQAE+Q+QI DFQ+EVI+RAKKAKEKA RD+KE QGP+SSS+IS  IEV SSPT+       SSP+A SE+VVNQDP  G+
Subjt:  GIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTS-------SSPDADSESVVNQDPSLGE

A0A6J1JX27 uncharacterized protein At4g13200, chloroplastic-like2.4e-5369.19Show/hide
Query:  MSSGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLS
        MSSGV SSVS S FS++ T+ KITH S PSL+ FRSSST SNLKFR      PNG  RF+A CSSGDGD+RTVLDAFFLGKA AE LTER+EST+GEVLS
Subjt:  MSSGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLS

Query:  GIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTSSSP-------DADSESVVNQDPSLGE
         IGRLQAE+Q+QI DFQ+EVIERAKKAKEKA RD+KE QGP+SSS++S  IEV SSPT SS        +A SE+VVNQDP  G+
Subjt:  GIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTSSSP-------DADSESVVNQDPSLGE

SwissProt top hitse value%identityAlignment
P73628 Thylakoid protein sll17699.0e-0534.09Show/hide
Query:  VLDAFFLGKALAEALTERIESTIGEVLSGIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTSS
        VL AFFLG+A AE L+E++E  +   LS +G+  AEQ++ +  F  EV  RA     +       V GPVS+  +   ++   +  +S
Subjt:  VLDAFFLGKALAEALTERIESTIGEVLSGIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTSS

Q8LDV3 Uncharacterized protein At4g13200, chloroplastic4.8e-2253.91Show/hide
Query:  SGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLSGIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVI----SPKIEVFSSPTSS
        SG+ ++++VLDAFFLGKALAE + ERIEST+GEVLS IG+ QAEQQKQ+ + Q+EV+ERAKKAKE+AAR++ E QG V+S  +    +P   V +S TS+
Subjt:  SGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLSGIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVI----SPKIEVFSSPTSS

Query:  SPDADSESVVNQDPS
        S       +V+ + S
Subjt:  SPDADSESVVNQDPS

Arabidopsis top hitse value%identityAlignment
AT4G13200.1 unknown protein3.4e-2353.91Show/hide
Query:  SGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLSGIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVI----SPKIEVFSSPTSS
        SG+ ++++VLDAFFLGKALAE + ERIEST+GEVLS IG+ QAEQQKQ+ + Q+EV+ERAKKAKE+AAR++ E QG V+S  +    +P   V +S TS+
Subjt:  SGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLSGIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVI----SPKIEVFSSPTSS

Query:  SPDADSESVVNQDPS
        S       +V+ + S
Subjt:  SPDADSESVVNQDPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAGTGGGGTTACATCTTCTGTTTCCCAATCTCCTTTTTCACTTGTGACCACTAAACCAAAAATTACCCATTATTCACCTCCATCTCTCCTTCTATTTCGCTCCTC
TTCCACTCCTTCAAATCTCAAATTTCGTGGAATTTCACATTTTCAACCCAATGGGCCTTCCAGATTCTTAGCTCGTTGCAGCTCTGGTGATGGTGACAGCAGGACCGTTC
TAGATGCCTTCTTTTTAGGAAAAGCTTTGGCAGAAGCCTTAACTGAGCGAATCGAGTCAACAATTGGAGAGGTTTTGAGTGGGATTGGTAGGCTGCAAGCTGAACAACAA
AAACAAATTACTGATTTCCAGGATGAAGTGATAGAAAGAGCTAAAAAGGCCAAGGAAAAAGCAGCACGTGATTCCAAAGAAGTACAAGGACCTGTTTCCTCTTCAGTAAT
ATCGCCTAAAATCGAAGTTTTTTCGTCTCCAACTTCTTCAAGTCCGGATGCAGATTCAGAAAGTGTTGTGAATCAGGATCCTTCCCTTGGTGAATAA
mRNA sequenceShow/hide mRNA sequence
AGATAATGATGAGTTCTAGTAGACAAAGTAGTAAATGTGAAAGCATCTCCAACGTTTTTAGCACAGAAAACTTTCCATTTACTTAGGCTACCAATTTCCAGTCTATGAAA
GTGGGAATTGGGTAAGCCGAACAAGGAATGAAGCAAAAATAGGGTCGGTTCTGAGTCATTGTCATTGCATATCTCAAATCTACAATGCAAAATTTCCATTTTTATTTCCC
CCCACCGAAGATCTTTCTTTTATAAATTCCTGTTTGGCTCTCAAGAAAACTTGCGAGAAACTCTGAGAAAGTGACGCCGTGTAGTTTTCCATTCCATCGCACAATATGAG
TAGTGGGGTTACATCTTCTGTTTCCCAATCTCCTTTTTCACTTGTGACCACTAAACCAAAAATTACCCATTATTCACCTCCATCTCTCCTTCTATTTCGCTCCTCTTCCA
CTCCTTCAAATCTCAAATTTCGTGGAATTTCACATTTTCAACCCAATGGGCCTTCCAGATTCTTAGCTCGTTGCAGCTCTGGTGATGGTGACAGCAGGACCGTTCTAGAT
GCCTTCTTTTTAGGAAAAGCTTTGGCAGAAGCCTTAACTGAGCGAATCGAGTCAACAATTGGAGAGGTTTTGAGTGGGATTGGTAGGCTGCAAGCTGAACAACAAAAACA
AATTACTGATTTCCAGGATGAAGTGATAGAAAGAGCTAAAAAGGCCAAGGAAAAAGCAGCACGTGATTCCAAAGAAGTACAAGGACCTGTTTCCTCTTCAGTAATATCGC
CTAAAATCGAAGTTTTTTCGTCTCCAACTTCTTCAAGTCCGGATGCAGATTCAGAAAGTGTTGTGAATCAGGATCCTTCCCTTGGTGAATAAGAGTAATGGTCATTATGT
CAATTTCTCTTGGTTATAGACTTATAGGGAATGTAACCTATTTACCAATGGTGATATTTAAGTTATTTGGCTTTGAAATCATATAGTAATTACCTTATTTAGGGTTGTGT
CTATTACATATCTTATGAGTTTCTTGACATCGAATATTGTTAGATCGAACAACCTGATCTGTTTAGCAAGATTATTATGGGTTTGAAATTAGAGGAACCTGATTTCTGGG
TTTGAAATTAGATGGTTTGACGTTTGAAGCCAAGGGTATGTTTGATCGCTTAGAACGGAAATGGAAACCAAATTTATGGGTTTTGAATATATATTTTTTTATTTTAAAAA
ATATTTTTTAAATATTGAATAACTTGAATTTTAGGAAA
Protein sequenceShow/hide protein sequence
MSSGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLSGIGRLQAEQQ
KQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTSSSPDADSESVVNQDPSLGE