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CSPI07G14570 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G14570
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRibonuclease T(2)
Genome locationChr7:13059950..13060354
RNA-Seq ExpressionCSPI07G14570
SyntenyCSPI07G14570
Gene Ontology termsGO:0016070 - RNA metabolic process (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0033897 - ribonuclease T2 activity (molecular function)
InterPro domainsIPR001568 - Ribonuclease T2-like
IPR036430 - Ribonuclease T2-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651058.1 hypothetical protein Csa_002465 [Cucumis sativus]4.4e-1736.57Show/hide
Query:  MNQYWKDLENGNSIEAWASKWEMHGTCSAAGFDQFKYFCLGLDTYGRHAIFSFLDREGLAPSSSKYVAKASFITAIANSTLKKGGVICAVD-QYRRIQLQ
        +N  W DL+ GN+ + W  +W+ HG CS   F  F+YF + L+   +  + + L   GL P +S+ +A  + +  I  +T K  G+ C  + +  + QL 
Subjt:  MNQYWKDLENGNSIEAWASKWEMHGTCSAAGFDQFKYFCLGLDTYGRHAIFSFLDREGLAPSSSKYVAKASFITAIANSTLKKGGVICAVD-QYRRIQLQ

Query:  KAVLCYVKDGHTLIDCPDNVSSSCPDNFVWLALG
        + VLC  KDG TLIDCP  VS++C  +FVW  +G
Subjt:  KAVLCYVKDGHTLIDCPDNVSSSCPDNFVWLALG

KGN45018.2 hypothetical protein Csa_016393 [Cucumis sativus]8.7e-74100Show/hide
Query:  MNQYWKDLENGNSIEAWASKWEMHGTCSAAGFDQFKYFCLGLDTYGRHAIFSFLDREGLAPSSSKYVAKASFITAIANSTLKKGGVICAVDQYRRIQLQK
        MNQYWKDLENGNSIEAWASKWEMHGTCSAAGFDQFKYFCLGLDTYGRHAIFSFLDREGLAPSSSKYVAKASFITAIANSTLKKGGVICAVDQYRRIQLQK
Subjt:  MNQYWKDLENGNSIEAWASKWEMHGTCSAAGFDQFKYFCLGLDTYGRHAIFSFLDREGLAPSSSKYVAKASFITAIANSTLKKGGVICAVDQYRRIQLQK

Query:  AVLCYVKDGHTLIDCPDNVSSSCPDNFVWLALGD
        AVLCYVKDGHTLIDCPDNVSSSCPDNFVWLALGD
Subjt:  AVLCYVKDGHTLIDCPDNVSSSCPDNFVWLALGD

XP_004149779.2 ribonuclease MC [Cucumis sativus]8.7e-74100Show/hide
Query:  MNQYWKDLENGNSIEAWASKWEMHGTCSAAGFDQFKYFCLGLDTYGRHAIFSFLDREGLAPSSSKYVAKASFITAIANSTLKKGGVICAVDQYRRIQLQK
        MNQYWKDLENGNSIEAWASKWEMHGTCSAAGFDQFKYFCLGLDTYGRHAIFSFLDREGLAPSSSKYVAKASFITAIANSTLKKGGVICAVDQYRRIQLQK
Subjt:  MNQYWKDLENGNSIEAWASKWEMHGTCSAAGFDQFKYFCLGLDTYGRHAIFSFLDREGLAPSSSKYVAKASFITAIANSTLKKGGVICAVDQYRRIQLQK

Query:  AVLCYVKDGHTLIDCPDNVSSSCPDNFVWLALGD
        AVLCYVKDGHTLIDCPDNVSSSCPDNFVWLALGD
Subjt:  AVLCYVKDGHTLIDCPDNVSSSCPDNFVWLALGD

XP_022143591.1 ribonuclease 1-like [Momordica charantia]6.9e-4767.16Show/hide
Query:  MNQYWKDLENGNSIEAWASKWEMHGTCSAAGFDQFKYFCLGLDTYGRHAIFSFLDREGLAPSSSKYVAKASFITAIANSTLKKGGVICAVDQYRRIQLQK
        M +YW+DL +G++  AW +KW +HGTCSA  FD+FKYFC+GLDTYGRHAI SFL   GL PSS++   K SFI AIA+ T KKGGVICA DQ  R QL+ 
Subjt:  MNQYWKDLENGNSIEAWASKWEMHGTCSAAGFDQFKYFCLGLDTYGRHAIFSFLDREGLAPSSSKYVAKASFITAIANSTLKKGGVICAVDQYRRIQLQK

Query:  AVLCYVKDGHTLIDCPDNVSSSCPDNFVWLALGD
         VLCY KDG T+IDCPDNVSSSCPD F+WLALGD
Subjt:  AVLCYVKDGHTLIDCPDNVSSSCPDNFVWLALGD

XP_038899255.1 ribonuclease MC-like [Benincasa hispida]9.6e-5779.1Show/hide
Query:  MNQYWKDLENGNSIEAWASKWEMHGTCSAAGFDQFKYFCLGLDTYGRHAIFSFLDREGLAPSSSKYVAKASFITAIANSTLKKGGVICAVDQYRRIQLQK
        M+QYW+DLENGN IEAWASKW +HGTCSA  FD+FKYFCLGLDTYGRHA+ SFL   GL PSSSKY+ K SF+ AIA+ T KKGGVICAVDQ  R QLQK
Subjt:  MNQYWKDLENGNSIEAWASKWEMHGTCSAAGFDQFKYFCLGLDTYGRHAIFSFLDREGLAPSSSKYVAKASFITAIANSTLKKGGVICAVDQYRRIQLQK

Query:  AVLCYVKDGHTLIDCPDNVSSSCPDNFVWLALGD
        AVLCY KDG TLIDCPDNVSSSCPDNF+WLALGD
Subjt:  AVLCYVKDGHTLIDCPDNVSSSCPDNFVWLALGD

TrEMBL top hitse value%identityAlignment
A0A0A0K4L1 Uncharacterized protein4.2e-74100Show/hide
Query:  MNQYWKDLENGNSIEAWASKWEMHGTCSAAGFDQFKYFCLGLDTYGRHAIFSFLDREGLAPSSSKYVAKASFITAIANSTLKKGGVICAVDQYRRIQLQK
        MNQYWKDLENGNSIEAWASKWEMHGTCSAAGFDQFKYFCLGLDTYGRHAIFSFLDREGLAPSSSKYVAKASFITAIANSTLKKGGVICAVDQYRRIQLQK
Subjt:  MNQYWKDLENGNSIEAWASKWEMHGTCSAAGFDQFKYFCLGLDTYGRHAIFSFLDREGLAPSSSKYVAKASFITAIANSTLKKGGVICAVDQYRRIQLQK

Query:  AVLCYVKDGHTLIDCPDNVSSSCPDNFVWLALGD
        AVLCYVKDGHTLIDCPDNVSSSCPDNFVWLALGD
Subjt:  AVLCYVKDGHTLIDCPDNVSSSCPDNFVWLALGD

A0A0A0LAN6 Ribonuclease T(2)8.1e-1736.92Show/hide
Query:  MNQYWKDLENGNSIEAWASKWEMHGTCSAAGFDQFKYFCLGLDTYGRHAIFSFLDREGLAPSSSKYVAKASFITAIANSTLKKGGVICAVD-QYRRIQLQ
        +N  W DL+ GN+ + W  +W+ HG CS   F  F+YF + L+   +  + + L   GL P +S+ +A  + +  I  +T K  G+ C  + +  + QL 
Subjt:  MNQYWKDLENGNSIEAWASKWEMHGTCSAAGFDQFKYFCLGLDTYGRHAIFSFLDREGLAPSSSKYVAKASFITAIANSTLKKGGVICAVD-QYRRIQLQ

Query:  KAVLCYVKDGHTLIDCPDNVSSSCPDNFVW
        + VLC  KDG TLIDCP  VS++C  +FVW
Subjt:  KAVLCYVKDGHTLIDCPDNVSSSCPDNFVW

A0A6J1CQQ9 ribonuclease 1-like3.4e-4767.16Show/hide
Query:  MNQYWKDLENGNSIEAWASKWEMHGTCSAAGFDQFKYFCLGLDTYGRHAIFSFLDREGLAPSSSKYVAKASFITAIANSTLKKGGVICAVDQYRRIQLQK
        M +YW+DL +G++  AW +KW +HGTCSA  FD+FKYFC+GLDTYGRHAI SFL   GL PSS++   K SFI AIA+ T KKGGVICA DQ  R QL+ 
Subjt:  MNQYWKDLENGNSIEAWASKWEMHGTCSAAGFDQFKYFCLGLDTYGRHAIFSFLDREGLAPSSSKYVAKASFITAIANSTLKKGGVICAVDQYRRIQLQK

Query:  AVLCYVKDGHTLIDCPDNVSSSCPDNFVWLALGD
         VLCY KDG T+IDCPDNVSSSCPD F+WLALGD
Subjt:  AVLCYVKDGHTLIDCPDNVSSSCPDNFVWLALGD

A0A6J1E266 ribonuclease MC-like8.1e-1737.69Show/hide
Query:  MNQYWKDLENGNSIEAWASKWEMHGTCSAAGFDQFKYFCLGLDTYGRHAIFSFLDREGLAPSSSKYVAKASFITAIANSTLKKGGVICAVDQY-RRIQLQ
        +N  W  +  G +   W+ +W  HGTCS     Q  YF  GLDTY ++ I+S LD+E + PS   Y +K+S   AI   T K  G+ C  + Y R  QL 
Subjt:  MNQYWKDLENGNSIEAWASKWEMHGTCSAAGFDQFKYFCLGLDTYGRHAIFSFLDREGLAPSSSKYVAKASFITAIANSTLKKGGVICAVDQY-RRIQLQ

Query:  KAVLCYVKDGHTLIDCPDNVSSSCPDNFVW
        + +LC+ K    +IDCP NV  +C +   W
Subjt:  KAVLCYVKDGHTLIDCPDNVSSSCPDNFVW

A0A6J1IAR7 Ribonuclease T(2)4.0e-1636.84Show/hide
Query:  MNQYWKDLENGNSIEAWASKWEMHGTCSAAGFDQFKYF--CLGLDTYGRHAIFSFLDREGLAPSSSKYVAKASFITAIANSTLKKGGVICAVD-QYRRIQ
        +N YW D+ NGN+   W  +W+ HGTCS   F+Q +YF   L + T   + + + L+  GL P+++      +   AI  +T KK G+ C  + Q +R Q
Subjt:  MNQYWKDLENGNSIEAWASKWEMHGTCSAAGFDQFKYF--CLGLDTYGRHAIFSFLDREGLAPSSSKYVAKASFITAIANSTLKKGGVICAVD-QYRRIQ

Query:  LQKAVLCYVKDGHTLIDCPDNVSSSCPDNFVWL
        L + +LC+ K+G TLI+C      +CP  FVWL
Subjt:  LQKAVLCYVKDGHTLIDCPDNVSSSCPDNFVWL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCAATACTGGAAAGATTTGGAGAACGGGAACTCGATAGAAGCATGGGCGAGTAAGTGGGAAATGCACGGAACTTGCTCCGCGGCTGGGTTTGATCAGTTCAAGTA
TTTCTGCTTGGGTCTGGATACCTACGGTCGCCATGCCATTTTTTCATTTCTAGACCGTGAAGGATTGGCTCCCAGCTCTAGCAAGTATGTAGCCAAGGCTAGCTTTATCA
CAGCCATCGCAAACTCGACCTTGAAGAAGGGTGGCGTCATCTGCGCAGTTGATCAATATCGTCGAATACAACTTCAAAAGGCGGTTTTATGTTATGTCAAAGATGGTCAT
ACTCTCATTGACTGCCCAGATAACGTTAGCAGTTCCTGTCCTGATAACTTCGTGTGGCTTGCCTTGGGTGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACCAATACTGGAAAGATTTGGAGAACGGGAACTCGATAGAAGCATGGGCGAGTAAGTGGGAAATGCACGGAACTTGCTCCGCGGCTGGGTTTGATCAGTTCAAGTA
TTTCTGCTTGGGTCTGGATACCTACGGTCGCCATGCCATTTTTTCATTTCTAGACCGTGAAGGATTGGCTCCCAGCTCTAGCAAGTATGTAGCCAAGGCTAGCTTTATCA
CAGCCATCGCAAACTCGACCTTGAAGAAGGGTGGCGTCATCTGCGCAGTTGATCAATATCGTCGAATACAACTTCAAAAGGCGGTTTTATGTTATGTCAAAGATGGTCAT
ACTCTCATTGACTGCCCAGATAACGTTAGCAGTTCCTGTCCTGATAACTTCGTGTGGCTTGCCTTGGGTGATTGA
Protein sequenceShow/hide protein sequence
MNQYWKDLENGNSIEAWASKWEMHGTCSAAGFDQFKYFCLGLDTYGRHAIFSFLDREGLAPSSSKYVAKASFITAIANSTLKKGGVICAVDQYRRIQLQKAVLCYVKDGH
TLIDCPDNVSSSCPDNFVWLALGD