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CSPI07G15330 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G15330
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionFanconi anemia group D2 protein
Genome locationChr7:14011110..14012040
RNA-Seq ExpressionCSPI07G15330
SyntenyCSPI07G15330
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN44712.1 hypothetical protein Csa_016169 [Cucumis sativus]4.3e-4198.92Show/hide
Query:  MLRTRLFWFSLGFATTAASISHFVWRDLLACRCALSSDASFMERSFDALEARISNLESARNRNSVSSAEGATVDKNHVNVLGSVAYVLVLCRW
        MLRTRLFWFSLGFATTAASISHFVWRDLLA RCALSSDASFMERSFDALEARISNLESARNRNSVSSAEGATVDKNHVNVLGSVAYVLVLCRW
Subjt:  MLRTRLFWFSLGFATTAASISHFVWRDLLACRCALSSDASFMERSFDALEARISNLESARNRNSVSSAEGATVDKNHVNVLGSVAYVLVLCRW

XP_004148945.1 uncharacterized protein LOC101218167 [Cucumis sativus]4.0e-2394.2Show/hide
Query:  MLRTRLFWFSLGFATTAASISHFVWRDLLACRCALSSDASFMERSFDALEARISNLESARNRNSVSSAE
        MLRTRLFWFSLGFATTAASISHFVWRDLLA RCALSSD   MERSFDALEARISNLESARNRNSVSSAE
Subjt:  MLRTRLFWFSLGFATTAASISHFVWRDLLACRCALSSDASFMERSFDALEARISNLESARNRNSVSSAE

XP_008447209.1 PREDICTED: uncharacterized protein LOC103489712 isoform X1 [Cucumis melo]4.6e-1984.06Show/hide
Query:  MLRTRLFWFSLGFATTAASISHFVWRDLLACRCALSSDASFMERSFDALEARISNLESARNRNSVSSAE
        MLRTRLFWFS+GFATTAASIS FVWRDLLA R AL SD   MER+FDALEARISNLES RNRNS+SSAE
Subjt:  MLRTRLFWFSLGFATTAASISHFVWRDLLACRCALSSDASFMERSFDALEARISNLESARNRNSVSSAE

XP_008447214.1 PREDICTED: uncharacterized protein LOC103489712 isoform X2 [Cucumis melo]2.7e-1983.1Show/hide
Query:  MLRTRLFWFSLGFATTAASISHFVWRDLLACRCALSSDASFMERSFDALEARISNLESARNRNSVSSAEGA
        MLRTRLFWFS+GFATTAASIS FVWRDLLA R AL SD   MER+FDALEARISNLES RNRNS+SSAE A
Subjt:  MLRTRLFWFSLGFATTAASISHFVWRDLLACRCALSSDASFMERSFDALEARISNLESARNRNSVSSAEGA

XP_008447216.1 PREDICTED: uncharacterized protein LOC103489712 isoform X3 [Cucumis melo]4.6e-1984.06Show/hide
Query:  MLRTRLFWFSLGFATTAASISHFVWRDLLACRCALSSDASFMERSFDALEARISNLESARNRNSVSSAE
        MLRTRLFWFS+GFATTAASIS FVWRDLLA R AL SD   MER+FDALEARISNLES RNRNS+SSAE
Subjt:  MLRTRLFWFSLGFATTAASISHFVWRDLLACRCALSSDASFMERSFDALEARISNLESARNRNSVSSAE

TrEMBL top hitse value%identityAlignment
A0A0A0K8L3 Uncharacterized protein2.1e-4198.92Show/hide
Query:  MLRTRLFWFSLGFATTAASISHFVWRDLLACRCALSSDASFMERSFDALEARISNLESARNRNSVSSAEGATVDKNHVNVLGSVAYVLVLCRW
        MLRTRLFWFSLGFATTAASISHFVWRDLLA RCALSSDASFMERSFDALEARISNLESARNRNSVSSAEGATVDKNHVNVLGSVAYVLVLCRW
Subjt:  MLRTRLFWFSLGFATTAASISHFVWRDLLACRCALSSDASFMERSFDALEARISNLESARNRNSVSSAEGATVDKNHVNVLGSVAYVLVLCRW

A0A1S3BGW3 uncharacterized protein LOC103489712 isoform X12.2e-1984.06Show/hide
Query:  MLRTRLFWFSLGFATTAASISHFVWRDLLACRCALSSDASFMERSFDALEARISNLESARNRNSVSSAE
        MLRTRLFWFS+GFATTAASIS FVWRDLLA R AL SD   MER+FDALEARISNLES RNRNS+SSAE
Subjt:  MLRTRLFWFSLGFATTAASISHFVWRDLLACRCALSSDASFMERSFDALEARISNLESARNRNSVSSAE

A0A1S3BGX2 uncharacterized protein LOC103489712 isoform X21.3e-1983.1Show/hide
Query:  MLRTRLFWFSLGFATTAASISHFVWRDLLACRCALSSDASFMERSFDALEARISNLESARNRNSVSSAEGA
        MLRTRLFWFS+GFATTAASIS FVWRDLLA R AL SD   MER+FDALEARISNLES RNRNS+SSAE A
Subjt:  MLRTRLFWFSLGFATTAASISHFVWRDLLACRCALSSDASFMERSFDALEARISNLESARNRNSVSSAEGA

A0A1S3BHI8 uncharacterized protein LOC103489712 isoform X32.2e-1984.06Show/hide
Query:  MLRTRLFWFSLGFATTAASISHFVWRDLLACRCALSSDASFMERSFDALEARISNLESARNRNSVSSAE
        MLRTRLFWFS+GFATTAASIS FVWRDLLA R AL SD   MER+FDALEARISNLES RNRNS+SSAE
Subjt:  MLRTRLFWFSLGFATTAASISHFVWRDLLACRCALSSDASFMERSFDALEARISNLESARNRNSVSSAE

A0A6J1JNH5 uncharacterized protein LOC111488481 isoform X15.0e-1975.68Show/hide
Query:  MLRTRLFWFSLGFATTAASISHFVWRDLLACRCALSSDASFMERSFDALEARISNLESARNRNSVSSAEGATVD
        MLRTRLFWFS+GFA T+ASIS FVWRDLLA RCALSSD   +ER+FDALEARISNLES RNR+S+ SAE A  +
Subjt:  MLRTRLFWFSLGFATTAASISHFVWRDLLACRCALSSDASFMERSFDALEARISNLESARNRNSVSSAEGATVD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G07568.1 unknown protein5.8e-1258.73Show/hide
Query:  MLRTRLFWFSLGFATTAASISHFVWRDLLACRCALSSDASFMERSFDALEARISNLESARNRN
        MLRTRL WF+LGF+ T  SI+H VWRDL A R A+SSD   M+  F ALE R+S LES    N
Subjt:  MLRTRLFWFSLGFATTAASISHFVWRDLLACRCALSSDASFMERSFDALEARISNLESARNRN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAGAACTCGATTGTTTTGGTTCAGTTTAGGATTCGCGACAACAGCTGCTTCCATTTCCCATTTCGTCTGGAGAGATCTATTGGCTTGTCGATGTGCTCTTTCATC
TGATGCAAGTTTTATGGAGCGGAGTTTTGATGCCCTGGAAGCTAGAATCTCGAATCTCGAGTCCGCTCGAAACCGGAATTCGGTTTCATCTGCTGAGGGTGCTACTGTTG
ATAAGAATCACGTTAATGTCCTTGGCTCCGTTGCTTATGTTCTTGTTTTATGTCGATGGTACTCTTTGATTCAAAATCAACCATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAGAACTCGATTGTTTTGGTTCAGTTTAGGATTCGCGACAACAGCTGCTTCCATTTCCCATTTCGTCTGGAGAGATCTATTGGCTTGTCGATGTGCTCTTTCATC
TGATGCAAGTTTTATGGAGCGGAGTTTTGATGCCCTGGAAGCTAGAATCTCGAATCTCGAGTCCGCTCGAAACCGGAATTCGGTTTCATCTGCTGAGGGTGCTACTGTTG
ATAAGAATCACGTTAATGTCCTTGGCTCCGTTGCTTATGTTCTTGTTTTATGTCGATGGTACTCTTTGATTCAAAATCAACCATAA
Protein sequenceShow/hide protein sequence
MLRTRLFWFSLGFATTAASISHFVWRDLLACRCALSSDASFMERSFDALEARISNLESARNRNSVSSAEGATVDKNHVNVLGSVAYVLVLCRWYSLIQNQP