CuGenDBv2

Gene ID	CSPI07G15350
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	mediator of RNA polymerase II transcription subunit 19a-like
Genome location	Chr7:14022643..14029881
RNA-Seq Expression	CSPI07G15350
Synteny	CSPI07G15350
Gene Ontology terms	GO:0006777 - Mo-molybdopterin cofactor biosynthetic process (biological process) GO:0045944 - positive regulation of transcription by RNA polymerase II (biological process) GO:0016592 - mediator complex (cellular component) GO:0019008 - molybdopterin synthase complex (cellular component) GO:0003712 - transcription coregulator activity (molecular function) GO:0005525 - GTP binding (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function) GO:0061798 - GTP 3',8'-cyclase activity (molecular function)
InterPro domains	IPR019403 - Mediator complex, subunit Med19, metazoa

Homology

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GenBank top hits

e value

%identity

Alignment

XP_016900359.1 PREDICTED: mediator of RNA polymerase II transcription subunit 19a-like [Cucumis melo]

1.4e-110

99.54

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Query:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRET
        MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRET
Subjt:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRET

Query:  GPVDLPSAEKGVPTIPGKSKSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSGHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK
        GPVDLPSAEKGVPTIPGKSKSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKK+KSGHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK
Subjt:  GPVDLPSAEKGVPTIPGKSKSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSGHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK

Query:  KSKHKASKIEEMGVIK
        KSKHKASKIEEMGVIK
Subjt:  KSKHKASKIEEMGVIK

XP_022143549.1 mediator of RNA polymerase II transcription subunit 19a-like isoform X2 [Momordica charantia]

1.7e-106

95.83

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Query:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRET
        MESEDKKFGRGPRELTGAVDLISHYKLLPHH+FFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRET
Subjt:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRET

Query:  GPVDLPSAEKGVPTIPGKSKSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSGHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK
        GPVDLP AEKGVPTIPGKSKSESKDK+RKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKK++KS H +SGADHSKKHHEKKRKHDGEDDINDIHRHK
Subjt:  GPVDLPSAEKGVPTIPGKSKSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSGHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK

Query:  KSKHKASKIEEMGVIK
        KSKHK SKIEEMGVIK
Subjt:  KSKHKASKIEEMGVIK

XP_023513830.1 mediator of RNA polymerase II transcription subunit 19a-like [Cucurbita pepo subsp. pepo]

1.5e-107

95.43

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Query:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRET
        MESEDKKFG+GPRELTGAVDLISHYKLLPHH+FFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLIQN SYPRETNARIQPFDQDILIEAFQLRET
Subjt:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRET

Query:  GPVDLPSAEKGVPTIPGKSKSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSGHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK
        GPV+LP AEKGVPTIPGKSKSESKDKDRKHKKHKDRDK+KDREHKKHKHRHKDRSKDKDKDKKK+KS HQDSGADHSKKHHEKKRKHDGEDDINDIHRHK
Subjt:  GPVDLPSAEKGVPTIPGKSKSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSGHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK

Query:  KSKHKASKIEEMGVIKSSF
        K+KHKA+KIEEMGVIKSSF
Subjt:  KSKHKASKIEEMGVIKSSF

XP_031744806.1 mediator of RNA polymerase II transcription subunit 19a [Cucumis sativus]

6.5e-111

100

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Query:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRET
        MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRET
Subjt:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRET

Query:  GPVDLPSAEKGVPTIPGKSKSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSGHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK
        GPVDLPSAEKGVPTIPGKSKSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSGHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK
Subjt:  GPVDLPSAEKGVPTIPGKSKSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSGHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK

Query:  KSKHKASKIEEMGVIK
        KSKHKASKIEEMGVIK
Subjt:  KSKHKASKIEEMGVIK

XP_038898851.1 mediator of RNA polymerase II transcription subunit 19a-like isoform X1 [Benincasa hispida]

2.3e-108

97.22

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Query:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRET
        ME+EDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLIQNTSYPRETNARIQPFDQD+LIEAFQLRET
Subjt:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRET

Query:  GPVDLPSAEKGVPTIPGKSKSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSGHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK
        GPVDLPSAEKGVPTIPGKSKSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKK+KS H DSGADHSKKHHEKKRKHDGEDDINDIHRHK
Subjt:  GPVDLPSAEKGVPTIPGKSKSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSGHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK

Query:  KSKHKASKIEEMGVIK
        KSKHK SKIEEMGVIK
Subjt:  KSKHKASKIEEMGVIK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K716 Uncharacterized protein

7.5e-113

100

Show/hide

Query:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRET
        MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRET
Subjt:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRET

Query:  GPVDLPSAEKGVPTIPGKSKSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSGHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK
        GPVDLPSAEKGVPTIPGKSKSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSGHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK
Subjt:  GPVDLPSAEKGVPTIPGKSKSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSGHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK

Query:  KSKHKASKIEEMGVIKSSF
        KSKHKASKIEEMGVIKSSF
Subjt:  KSKHKASKIEEMGVIKSSF

A0A1S4DWJ4 mediator of RNA polymerase II transcription subunit 19a-like

7.0e-111

99.54

Show/hide

Query:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRET
        MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRET
Subjt:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRET

Query:  GPVDLPSAEKGVPTIPGKSKSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSGHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK
        GPVDLPSAEKGVPTIPGKSKSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKK+KSGHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK
Subjt:  GPVDLPSAEKGVPTIPGKSKSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSGHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK

Query:  KSKHKASKIEEMGVIK
        KSKHKASKIEEMGVIK
Subjt:  KSKHKASKIEEMGVIK

A0A6J1CP39 mediator of RNA polymerase II transcription subunit 19a-like isoform X2

8.0e-107

95.83

Show/hide

Query:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRET
        MESEDKKFGRGPRELTGAVDLISHYKLLPHH+FFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRET
Subjt:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRET

Query:  GPVDLPSAEKGVPTIPGKSKSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSGHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK
        GPVDLP AEKGVPTIPGKSKSESKDK+RKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKK++KS H +SGADHSKKHHEKKRKHDGEDDINDIHRHK
Subjt:  GPVDLPSAEKGVPTIPGKSKSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSGHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK

Query:  KSKHKASKIEEMGVIK
        KSKHK SKIEEMGVIK
Subjt:  KSKHKASKIEEMGVIK

A0A6J1H5Q1 mediator of RNA polymerase II transcription subunit 19a-like

1.8e-106

95.37

Show/hide

Query:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRET
        MESEDKKFG+GPRELTGAVDLISHYKLLPHH+FFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLIQN SYPRETNARIQPFDQDILIEAFQLRET
Subjt:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRET

Query:  GPVDLPSAEKGVPTIPGKSKSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSGHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK
        GPV+LP AEKGVPTIPGKSKSESKDKDRKHKKHKDRDK+KDREHKKHKHRHKDRSKDKDKDKKK+KS HQDSGADHSKKHHEKKRKHDGEDDINDIHRHK
Subjt:  GPVDLPSAEKGVPTIPGKSKSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSGHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK

Query:  KSKHKASKIEEMGVIK
        K+KHKA+KIEEMGVIK
Subjt:  KSKHKASKIEEMGVIK

A0A6J1JTJ7 mediator of RNA polymerase II transcription subunit 19a-like isoform X1

8.9e-106

96.3

Show/hide

Query:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRET
        MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGD EIRKGEGMQLNQLIQNTSY RETNARIQPFDQDILI AFQLRET
Subjt:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRET

Query:  GPVDLPSAEKGVPTIPGKSKSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSGHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK
        GPVDLP AEKGV TIPGKS+SESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKS HQDSGADHSKKHHEKKRKHDGEDDINDIHRHK
Subjt:  GPVDLPSAEKGVPTIPGKSKSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSGHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK

Query:  KSKHKASKIEEMGVIK
        KSKHK SKIEEMGVIK
Subjt:  KSKHKASKIEEMGVIK

SwissProt top hits

e value

%identity

Alignment

Q6NQD9 Probable mediator of RNA polymerase II transcription subunit 19b

3.7e-69

69.09

Show/hide

Query:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLIQNTSY-PRETNARIQPFDQDILIEAFQLRE
        MESE  KFG GPREL GA+DLI+ YKLLPHH+FFCK+SLP S+SD HYLHN+VGDTEIRKGEGMQL+QLI N S   R+TNARIQPF  D L EAF+L +
Subjt:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLIQNTSY-PRETNARIQPFDQDILIEAFQLRE

Query:  TGPVDLPSAEKGVPTIPGKSKSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDK----DKKKEKSGHQDSGADHSKKHHEKKRKHDGEDDIND
        T PV+LP AEKG PT   KSKSESKDKDRKH+KHKD+ KEKDREHKKHKH+HKDR KDKDK    DKKKEKSG           HH+KKRK++G +D +D
Subjt:  TGPVDLPSAEKGVPTIPGKSKSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDK----DKKKEKSGHQDSGADHSKKHHEKKRKHDGEDDIND

Query:  IHRHKKSKHKASKIEEMGVI
        + RHKKSKHK+SK++EMG +
Subjt:  IHRHKKSKHKASKIEEMGVI

Q9FMP0 Mediator of RNA polymerase II transcription subunit 19a

7.3e-81

74.09

Show/hide

Query:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRET
        ME E  KFG GPREL GA DLIS +KL+ HH+FFCKKSLP+S+SD+HYLHNVVGDTEIRKGEGMQL+QLI++ S  RETN RIQPFD D L E+FQL + 
Subjt:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRET

Query:  GPVDLPSAEKGVPTIPGKSKSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDK----KKEKSGHQDSGADHSKKHHEKKRKHDGEDDINDI
         PV+LP AEKG PTIP KSKSESKD+DRKHKKHKDRDK+KDREHKKHKH+HKDRSKDKDKDK    KK+K+GH DSG DHSKKHH+KKRKHDG++D+ND+
Subjt:  GPVDLPSAEKGVPTIPGKSKSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDK----KKEKSGHQDSGADHSKKHHEKKRKHDGEDDINDI

Query:  HRHKKSKHKASKIEEMGVIK
         RHKK+KHK+SK++E+G I+
Subjt:  HRHKKSKHKASKIEEMGVIK

Arabidopsis top hits

e value

%identity

Alignment

AT5G12230.1 MED19A

5.2e-82

74.09

Show/hide

Query:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRET
        ME E  KFG GPREL GA DLIS +KL+ HH+FFCKKSLP+S+SD+HYLHNVVGDTEIRKGEGMQL+QLI++ S  RETN RIQPFD D L E+FQL + 
Subjt:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRET

Query:  GPVDLPSAEKGVPTIPGKSKSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDK----KKEKSGHQDSGADHSKKHHEKKRKHDGEDDINDI
         PV+LP AEKG PTIP KSKSESKD+DRKHKKHKDRDK+KDREHKKHKH+HKDRSKDKDKDK    KK+K+GH DSG DHSKKHH+KKRKHDG++D+ND+
Subjt:  GPVDLPSAEKGVPTIPGKSKSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDK----KKEKSGHQDSGADHSKKHHEKKRKHDGEDDINDI

Query:  HRHKKSKHKASKIEEMGVIK
         RHKK+KHK+SK++E+G I+
Subjt:  HRHKKSKHKASKIEEMGVIK

AT5G19480.1 unknown protein

2.7e-70

69.09

Show/hide

Query:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLIQNTSY-PRETNARIQPFDQDILIEAFQLRE
        MESE  KFG GPREL GA+DLI+ YKLLPHH+FFCK+SLP S+SD HYLHN+VGDTEIRKGEGMQL+QLI N S   R+TNARIQPF  D L EAF+L +
Subjt:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLIQNTSY-PRETNARIQPFDQDILIEAFQLRE

Query:  TGPVDLPSAEKGVPTIPGKSKSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDK----DKKKEKSGHQDSGADHSKKHHEKKRKHDGEDDIND
        T PV+LP AEKG PT   KSKSESKDKDRKH+KHKD+ KEKDREHKKHKH+HKDR KDKDK    DKKKEKSG           HH+KKRK++G +D +D
Subjt:  TGPVDLPSAEKGVPTIPGKSKSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDK----DKKKEKSGHQDSGADHSKKHHEKKRKHDGEDDIND

Query:  IHRHKKSKHKASKIEEMGVI
        + RHKKSKHK+SK++EMG +
Subjt:  IHRHKKSKHKASKIEEMGVI

AT5G19480.2 unknown protein

2.7e-70

69.09

Show/hide

Query:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLIQNTSY-PRETNARIQPFDQDILIEAFQLRE
        MESE  KFG GPREL GA+DLI+ YKLLPHH+FFCK+SLP S+SD HYLHN+VGDTEIRKGEGMQL+QLI N S   R+TNARIQPF  D L EAF+L +
Subjt:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLIQNTSY-PRETNARIQPFDQDILIEAFQLRE

Query:  TGPVDLPSAEKGVPTIPGKSKSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDK----DKKKEKSGHQDSGADHSKKHHEKKRKHDGEDDIND
        T PV+LP AEKG PT   KSKSESKDKDRKH+KHKD+ KEKDREHKKHKH+HKDR KDKDK    DKKKEKSG           HH+KKRK++G +D +D
Subjt:  TGPVDLPSAEKGVPTIPGKSKSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDK----DKKKEKSGHQDSGADHSKKHHEKKRKHDGEDDIND

Query:  IHRHKKSKHKASKIEEMGVI
        + RHKKSKHK+SK++EMG +
Subjt:  IHRHKKSKHKASKIEEMGVI

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAATCTGAAGATAAGAAATTTGGCCGAGGACCTAGGGAACTGACTGGTGCTGTGGATCTTATAAGTCACTACAAGTTGTTACCTCACCATGATTTTTTCTGCAAGAA
GTCACTTCCATTGTCAATTTCGGACACACATTATCTTCATAACGTGGTTGGAGACACAGAAATTAGAAAAGGAGAAGGGATGCAGTTGAATCAACTCATACAGAATACTT
CTTACCCTAGAGAGACTAATGCCCGCATACAGCCATTTGATCAAGATATTCTCATAGAAGCCTTCCAACTGAGGGAAACTGGTCCTGTTGATCTGCCTTCTGCCGAGAAG
GGTGTTCCTACTATTCCAGGGAAGTCAAAAAGTGAGTCCAAAGATAAAGACAGAAAGCACAAGAAGCACAAGGATAGAGATAAGGAGAAGGATAGAGAGCATAAGAAGCA
CAAGCATCGACATAAAGACCGGAGTAAGGATAAAGACAAGGACAAGAAGAAAGAAAAAAGTGGCCATCAAGATTCTGGTGCTGATCATTCTAAGAAGCATCATGAAAAGA
AAAGGAAGCATGATGGGGAAGATGATATTAATGACATTCATAGGCACAAAAAAAGTAAGCATAAGGCCTCAAAAATTGAAGAAATGGGAGTGATAAAGAGTAGCTTCTGA

mRNA sequence

Show/hide mRNA sequence

TTCCTCTCTTCTTCCCCGATCTCAATTCTCTCTCTCCCCCTCCCTCCCTCCCCTTTCTCTCTCTCCGCCGTTCCCGGCCGCCGGAGCTACTTCCTCACTCTCCTCACACA
CCATTCTTCAACCCCTTTTCCCTTCAATTCCATCTCATTCTTCGATTCGATCCTCGTCACCCCTTTTTCTCGATCGCTCTTTCAATCCCCTCTCCTTTCCCGGCGCCTCT
TTCCCTTTCTTCTACCCTTTTCCGCCCAGTTATAATGTTACATTGTCCCAAGGAAAAGTGATACATGGAATCTGAAGATAAGAAATTTGGCCGAGGACCTAGGGAACTGA
CTGGTGCTGTGGATCTTATAAGTCACTACAAGTTGTTACCTCACCATGATTTTTTCTGCAAGAAGTCACTTCCATTGTCAATTTCGGACACACATTATCTTCATAACGTG
GTTGGAGACACAGAAATTAGAAAAGGAGAAGGGATGCAGTTGAATCAACTCATACAGAATACTTCTTACCCTAGAGAGACTAATGCCCGCATACAGCCATTTGATCAAGA
TATTCTCATAGAAGCCTTCCAACTGAGGGAAACTGGTCCTGTTGATCTGCCTTCTGCCGAGAAGGGTGTTCCTACTATTCCAGGGAAGTCAAAAAGTGAGTCCAAAGATA
AAGACAGAAAGCACAAGAAGCACAAGGATAGAGATAAGGAGAAGGATAGAGAGCATAAGAAGCACAAGCATCGACATAAAGACCGGAGTAAGGATAAAGACAAGGACAAG
AAGAAAGAAAAAAGTGGCCATCAAGATTCTGGTGCTGATCATTCTAAGAAGCATCATGAAAAGAAAAGGAAGCATGATGGGGAAGATGATATTAATGACATTCATAGGCA
CAAAAAAAGTAAGCATAAGGCCTCAAAAATTGAAGAAATGGGAGTGATAAAGAGTAGCTTCTGATGAGGGTGAATTTACCAGTTTTAGGGTATGTGGAAGCAAATGTAAA
AAAGAAAAAAAAAAATTGGTGGAATTGAACTTTTGTAACATAACAAACAATGGGGTCTGATATATAAATATGAGCGATTTGCAGGACTGGTTGTTTTCCTCAGTTTCTTT
ATGGTATTCATTTGATGGATACCTTCCACATGTAACATTATATTCTTCTTCATTTCCTAGACCGTTTTCGAGTTGTAGTTTGAAGTAGCATTTCTTCGTCTTCGGTTTTT
CAAACGAAGGTAGAAGGCTAGAAAATTCTCTCTCCATATCTCATTCTCTCTCTCTCTCGTTCTCCCTTCCCATTGTGTTTCTTTTATCGGTATCACTTTTTAACTAACTG
AATTCCTTCCTAGAATGTAAATAACTAATCAGCCAGGAATGTGTAATTTTTATTGATGGTATCAAAGGGGAAATATGTATAGAAAATGGAATTTGATAATTTGTTCTCTC
TTTTTAG

Protein sequence

Show/hide protein sequence

MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPSAEK
GVPTIPGKSKSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSGHQDSGADHSKKHHEKKRKHDGEDDINDIHRHKKSKHKASKIEEMGVIKSSF

CSPI07G15350 (gene) of Cucumber (PI 183967) v1 genome