; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI07G16990 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G16990
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionE3 ubiquitin-protein ligase MIEL1-like
Genome locationChr7:15515718..15516235
RNA-Seq ExpressionCSPI07G16990
SyntenyCSPI07G16990
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046715.1 E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo var. makuwa]2.0e-3480.7Show/hide
Query:  MAAIRPLLSIAFLALFFFSESLLTSHSLTGIPHRTILNTAAHRIVDGSVEYSSYQIRKSNKLHIKDIRKRRSGPILVSSSNGNHHKSAANRPSPVASLEV
        MAAIRPL+SIA LAL FFSESLLTSHSLTGIPHR IL+T AHRIV+GSVE SSYQ RKSNKLH KD  +RR  PIL+S SNG HHKSA NR S VAS EV
Subjt:  MAAIRPLLSIAFLALFFFSESLLTSHSLTGIPHRTILNTAAHRIVDGSVEYSSYQIRKSNKLHIKDIRKRRSGPILVSSSNGNHHKSAANRPSPVASLEV

Query:  GSMLCICIFLGLFL
        GSMLCICIFLGLFL
Subjt:  GSMLCICIFLGLFL

KAG6575859.1 hypothetical protein SDJN03_26498, partial [Cucurbita argyrosperma subsp. sororia]1.6e-0746.72Show/hide
Query:  MAAIRPLLSIAFLALFFFSESLLT--------SHSLTGIPHRTILNTAAHRIVDGSVEYSSYQIRKSNKLHIKDIRKRRSGPILVSSSNGNHHKSAANRP
        MAA++ L+S+A LAL  FSESL          S+SLTG+  R +L TAAH+I D SVE S    RK N +HI    KRR  P+   +       SAANR 
Subjt:  MAAIRPLLSIAFLALFFFSESLLT--------SHSLTGIPHRTILNTAAHRIVDGSVEYSSYQIRKSNKLHIKDIRKRRSGPILVSSSNGNHHKSAANRP

Query:  SPVASLEVGSMLCICIFLGLFL
        S +AS+ VGS+L   + LGLFL
Subjt:  SPVASLEVGSMLCICIFLGLFL

KAG6593163.1 hypothetical protein SDJN03_12639, partial [Cucurbita argyrosperma subsp. sororia]7.3e-0543.55Show/hide
Query:  MAAIRPLLSIAFLALFFFSESLLT--------SHSLTGIPHRTILNTAA--HRIVDGSVEYSSYQIRKSNKLHIKDIRKRRSGPILVSSSNGNHHKSAAN
        MAAI+ LLSIA +AL  F ESL T        S SL GI  R I+ T A  H++ +           K   +HIK  R+ R  P+L+    G    SAAN
Subjt:  MAAIRPLLSIAFLALFFFSESLLT--------SHSLTGIPHRTILNTAA--HRIVDGSVEYSSYQIRKSNKLHIKDIRKRRSGPILVSSSNGNHHKSAAN

Query:  RPSPVASLEVGSMLCICIFLGLFL
        R S  A   VGSMLCI + LGLFL
Subjt:  RPSPVASLEVGSMLCICIFLGLFL

XP_008451651.1 PREDICTED: E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo]7.5e-2668.7Show/hide
Query:  MAAIRPLLSIAFLALFFFSESLLTSHSLTGIPHRTILNTAAHRIVDGSVEYSSYQIRKSNKLHIKDIRKRRSGPILVSSSNGNHHKSAANRPSPVASLE-
        MAAIRPL+SIA LAL FFSESLLTSHSLTGIPHR IL+T AHRIV+GSVE SSYQ RKSNKLH KD  +RR  PIL+S SNG HHKSA NR S VAS E 
Subjt:  MAAIRPLLSIAFLALFFFSESLLTSHSLTGIPHRTILNTAAHRIVDGSVEYSSYQIRKSNKLHIKDIRKRRSGPILVSSSNGNHHKSAANRPSPVASLE-

Query:  --------VGSMLCI
                +G ++C+
Subjt:  --------VGSMLCI

XP_008451666.1 PREDICTED: protein no-on-transient A-like [Cucumis melo]1.6e-0437.84Show/hide
Query:  MAAIRPLLSIAFLALFFFSESLLT---------SHSLTGIPHRTILNTAAHRIVDGSVEYSSYQIRKSNKLHIK-------------------------D
        MAAI+  + I+ LAL FF E L           S+S+TG+ HR IL TAAH+    +VE SS   RK N +H+K                          
Subjt:  MAAIRPLLSIAFLALFFFSESLLT---------SHSLTGIPHRTILNTAAHRIVDGSVEYSSYQIRKSNKLHIK-------------------------D

Query:  IRKRRSGPILVSSSNGNHHKSAANRPSPVASLEVGSMLCICIFLGLFL
         R R S    +      HHKSAANR S VAS  VG +L I   LGLF+
Subjt:  IRKRRSGPILVSSSNGNHHKSAANRPSPVASLEVGSMLCICIFLGLFL

TrEMBL top hitse value%identityAlignment
A0A0A0K929 Uncharacterized protein1.2e-53100Show/hide
Query:  MAAIRPLLSIAFLALFFFSESLLTSHSLTGIPHRTILNTAAHRIVDGSVEYSSYQIRKSNKLHIKDIRKRRSGPILVSSSNGNHHKSAANRPSPVASLEV
        MAAIRPLLSIAFLALFFFSESLLTSHSLTGIPHRTILNTAAHRIVDGSVEYSSYQIRKSNKLHIKDIRKRRSGPILVSSSNGNHHKSAANRPSPVASLEV
Subjt:  MAAIRPLLSIAFLALFFFSESLLTSHSLTGIPHRTILNTAAHRIVDGSVEYSSYQIRKSNKLHIKDIRKRRSGPILVSSSNGNHHKSAANRPSPVASLEV

Query:  GSMLCICIFLGLFL
        GSMLCICIFLGLFL
Subjt:  GSMLCICIFLGLFL

A0A1S3BRF6 protein no-on-transient A-like7.9e-0537.84Show/hide
Query:  MAAIRPLLSIAFLALFFFSESLLT---------SHSLTGIPHRTILNTAAHRIVDGSVEYSSYQIRKSNKLHIK-------------------------D
        MAAI+  + I+ LAL FF E L           S+S+TG+ HR IL TAAH+    +VE SS   RK N +H+K                          
Subjt:  MAAIRPLLSIAFLALFFFSESLLT---------SHSLTGIPHRTILNTAAHRIVDGSVEYSSYQIRKSNKLHIK-------------------------D

Query:  IRKRRSGPILVSSSNGNHHKSAANRPSPVASLEVGSMLCICIFLGLFL
         R R S    +      HHKSAANR S VAS  VG +L I   LGLF+
Subjt:  IRKRRSGPILVSSSNGNHHKSAANRPSPVASLEVGSMLCICIFLGLFL

A0A1S3BT53 E3 ubiquitin-protein ligase MIEL1-like3.6e-2668.7Show/hide
Query:  MAAIRPLLSIAFLALFFFSESLLTSHSLTGIPHRTILNTAAHRIVDGSVEYSSYQIRKSNKLHIKDIRKRRSGPILVSSSNGNHHKSAANRPSPVASLE-
        MAAIRPL+SIA LAL FFSESLLTSHSLTGIPHR IL+T AHRIV+GSVE SSYQ RKSNKLH KD  +RR  PIL+S SNG HHKSA NR S VAS E 
Subjt:  MAAIRPLLSIAFLALFFFSESLLTSHSLTGIPHRTILNTAAHRIVDGSVEYSSYQIRKSNKLHIKDIRKRRSGPILVSSSNGNHHKSAANRPSPVASLE-

Query:  --------VGSMLCI
                +G ++C+
Subjt:  --------VGSMLCI

A0A5A7VLE5 Protein no-on-transient A-like8.7e-0439.34Show/hide
Query:  MAAIRPLLSIAFLALFFFSESLLT--------SHSLTGIPHRTILNTAAHRIVDGSVEYSSYQIRKSNKLHIKDIRKRRSGPILVSSSNGNHHKSAANRP
        MAAI+ LL I+ LAL FFSESL T        S+S+TG+  R +L TA H I D   + +         +HIK     R  P+   +    + KSAA+R 
Subjt:  MAAIRPLLSIAFLALFFFSESLLT--------SHSLTGIPHRTILNTAAHRIVDGSVEYSSYQIRKSNKLHIKDIRKRRSGPILVSSSNGNHHKSAANRP

Query:  SPVASLEVGSMLCICIFLGLFL
        S VAS  +G +L    F  LFL
Subjt:  SPVASLEVGSMLCICIFLGLFL

A0A5D3D3Y6 E3 ubiquitin-protein ligase MIEL1-like9.5e-3580.7Show/hide
Query:  MAAIRPLLSIAFLALFFFSESLLTSHSLTGIPHRTILNTAAHRIVDGSVEYSSYQIRKSNKLHIKDIRKRRSGPILVSSSNGNHHKSAANRPSPVASLEV
        MAAIRPL+SIA LAL FFSESLLTSHSLTGIPHR IL+T AHRIV+GSVE SSYQ RKSNKLH KD  +RR  PIL+S SNG HHKSA NR S VAS EV
Subjt:  MAAIRPLLSIAFLALFFFSESLLTSHSLTGIPHRTILNTAAHRIVDGSVEYSSYQIRKSNKLHIKDIRKRRSGPILVSSSNGNHHKSAANRPSPVASLEV

Query:  GSMLCICIFLGLFL
        GSMLCICIFLGLFL
Subjt:  GSMLCICIFLGLFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCATTAGACCTCTACTTTCCATAGCTTTCTTGGCTCTTTTCTTCTTCTCCGAATCCCTACTCACTTCCCATTCTCTTACCGGAATTCCTCACCGGACCATCTT
GAACACGGCTGCGCATCGGATTGTGGATGGCAGTGTTGAGTACTCCTCCTACCAAATTAGGAAGTCGAATAAGCTTCATATCAAAGATATAAGAAAGCGGCGGAGTGGAC
CAATACTAGTCAGCAGCAGCAACGGCAACCATCATAAATCGGCAGCGAATCGGCCAAGCCCAGTAGCGTCCCTTGAGGTTGGATCTATGTTGTGTATCTGCATTTTCTTG
GGATTGTTCTTGTGA
mRNA sequenceShow/hide mRNA sequence
TGGTTGGTGGATGAATGAAGAGCTTAAAATTAAAATAATAGTTAAGAAAAGACAGAAACTAACTCAATTTTCCAAATGGCTGCCATTAGACCTCTACTTTCCATAGCTTT
CTTGGCTCTTTTCTTCTTCTCCGAATCCCTACTCACTTCCCATTCTCTTACCGGAATTCCTCACCGGACCATCTTGAACACGGCTGCGCATCGGATTGTGGATGGCAGTG
TTGAGTACTCCTCCTACCAAATTAGGAAGTCGAATAAGCTTCATATCAAAGATATAAGAAAGCGGCGGAGTGGACCAATACTAGTCAGCAGCAGCAACGGCAACCATCAT
AAATCGGCAGCGAATCGGCCAAGCCCAGTAGCGTCCCTTGAGGTTGGATCTATGTTGTGTATCTGCATTTTCTTGGGATTGTTCTTGTGAATATTGTGTAAACTTCCGAC
TCTTATTTGTTTCTTTTTCTGTGGTGTGTATTTAGCGTGATTAAAAGGGAAAAAGAAAATCAATAAAATGTATCCACT
Protein sequenceShow/hide protein sequence
MAAIRPLLSIAFLALFFFSESLLTSHSLTGIPHRTILNTAAHRIVDGSVEYSSYQIRKSNKLHIKDIRKRRSGPILVSSSNGNHHKSAANRPSPVASLEVGSMLCICIFL
GLFL