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CSPI07G17000 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G17000
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr7:15518206..15518547
RNA-Seq ExpressionCSPI07G17000
SyntenyCSPI07G17000
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646326.1 hypothetical protein Csa_016649, partial [Cucumis sativus]9.3e-4598.04Show/hide
Query:  MGAIIKLFVYVAIVVALILLSKPISTSAVDHDEISNSNNGILRRNVIQTTNRHEVGNGYQYSVKDEDTNQDGHKQSAKKAHCLNKKSLANRSGTMLFGVG
        MGAIIKLFVYVAIVVAL+LLSKPISTSAVDHDEISNSNNGILRRNVIQTTNRHEVGNGYQYSVKDEDTNQDGHKQSAKKAHCLNKKSLANRSGTMLFGVG
Subjt:  MGAIIKLFVYVAIVVALILLSKPISTSAVDHDEISNSNNGILRRNVIQTTNRHEVGNGYQYSVKDEDTNQDGHKQSAKKAHCLNKKSLANRSGTMLFGVG

Query:  SL
         L
Subjt:  SL

KGN44885.1 hypothetical protein Csa_016613 [Cucumis sativus]2.4e-3269.03Show/hide
Query:  MGAIIKLFVYVAIVVALILLSKPISTSAVDHDEISNSNNGILRRNVIQTTNRHEVGNGYQYSVKDEDTNQDGHKQSAKKAHCLNKKSLANRSGTMLFGVG
        MGAIIK  V +A+V  L+LLSKP+ST  VDH+EISNSNN +L R  +Q T+ H++ NGYQ S+KDEDT +D HK+  KKAHC NKKSLANR GTMLFGVG
Subjt:  MGAIIKLFVYVAIVVALILLSKPISTSAVDHDEISNSNNGILRRNVIQTTNRHEVGNGYQYSVKDEDTNQDGHKQSAKKAHCLNKKSLANRSGTMLFGVG

Query:  SLLCFSIVYGFFI
        SLLCFSIVYG FI
Subjt:  SLLCFSIVYGFFI

TrEMBL top hitse value%identityAlignment
A0A0A0K580 Uncharacterized protein1.2e-3269.03Show/hide
Query:  MGAIIKLFVYVAIVVALILLSKPISTSAVDHDEISNSNNGILRRNVIQTTNRHEVGNGYQYSVKDEDTNQDGHKQSAKKAHCLNKKSLANRSGTMLFGVG
        MGAIIK  V +A+V  L+LLSKP+ST  VDH+EISNSNN +L R  +Q T+ H++ NGYQ S+KDEDT +D HK+  KKAHC NKKSLANR GTMLFGVG
Subjt:  MGAIIKLFVYVAIVVALILLSKPISTSAVDHDEISNSNNGILRRNVIQTTNRHEVGNGYQYSVKDEDTNQDGHKQSAKKAHCLNKKSLANRSGTMLFGVG

Query:  SLLCFSIVYGFFI
        SLLCFSIVYG FI
Subjt:  SLLCFSIVYGFFI

A0A0A0K5W7 Uncharacterized protein3.5e-4597.09Show/hide
Query:  MGAIIKLFVYVAIVVALILLSKPISTSAVDHDEISNSNNGILRRNVIQTTNRHEVGNGYQYSVKDEDTNQDGHKQSAKKAHCLNKKSLANRSGTMLFGVG
        MGAIIKLFVYVAIVVAL+LLSKPISTSAVDHDEISNSNNGILRRNVIQTTNRHEVGNGYQYSVKDEDTNQDGHKQSAKKAHCLNKKSLANRSGTMLFGVG
Subjt:  MGAIIKLFVYVAIVVALILLSKPISTSAVDHDEISNSNNGILRRNVIQTTNRHEVGNGYQYSVKDEDTNQDGHKQSAKKAHCLNKKSLANRSGTMLFGVG

Query:  SLL
         L+
Subjt:  SLL

A0A6J1GRX2 uncharacterized protein LOC1114564668.6e-0437.72Show/hide
Query:  AIIKLFVYVAIVVALILLSKPISTSAVDHDEISNSNNGILRRNVIQTTNRHEV---GNGYQYSVKDEDTNQDGHKQSAKKAHCLNKKSLANRSGTMLFGV
        A IK  + +A+ +AL+LLS+ +  SA DH    +    + RR+ +QT  RH+V   G GYQYS + +   +   +++ ++A   +  S AN S T  FGV
Subjt:  AIIKLFVYVAIVVALILLSKPISTSAVDHDEISNSNNGILRRNVIQTTNRHEV---GNGYQYSVKDEDTNQDGHKQSAKKAHCLNKKSLANRSGTMLFGV

Query:  GSLLCFSIVYGFFI
        GSLLC   V+G F+
Subjt:  GSLLCFSIVYGFFI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGCAATAATCAAATTATTTGTCTACGTAGCAATTGTAGTTGCACTTATCTTGCTCTCCAAACCTATCTCGACTTCTGCTGTCGATCACGATGAGATTTCCAACTC
TAATAATGGAATACTTCGTCGAAATGTCATTCAGACAACGAATCGTCATGAAGTTGGAAATGGATATCAATACTCTGTTAAAGACGAAGATACCAATCAAGATGGGCATA
AACAATCTGCAAAGAAAGCTCATTGTCTAAATAAAAAATCGCTGGCCAATCGTAGTGGAACAATGTTATTTGGGGTTGGGTCTTTGCTATGTTTTAGTATTGTTTATGGT
TTCTTTATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGCAATAATCAAATTATTTGTCTACGTAGCAATTGTAGTTGCACTTATCTTGCTCTCCAAACCTATCTCGACTTCTGCTGTCGATCACGATGAGATTTCCAACTC
TAATAATGGAATACTTCGTCGAAATGTCATTCAGACAACGAATCGTCATGAAGTTGGAAATGGATATCAATACTCTGTTAAAGACGAAGATACCAATCAAGATGGGCATA
AACAATCTGCAAAGAAAGCTCATTGTCTAAATAAAAAATCGCTGGCCAATCGTAGTGGAACAATGTTATTTGGGGTTGGGTCTTTGCTATGTTTTAGTATTGTTTATGGT
TTCTTTATTTGA
Protein sequenceShow/hide protein sequence
MGAIIKLFVYVAIVVALILLSKPISTSAVDHDEISNSNNGILRRNVIQTTNRHEVGNGYQYSVKDEDTNQDGHKQSAKKAHCLNKKSLANRSGTMLFGVGSLLCFSIVYG
FFI