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CSPI07G17180 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G17180
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionprotein indeterminate-domain 2-like
Genome locationChr7:15640055..15640477
RNA-Seq ExpressionCSPI07G17180
SyntenyCSPI07G17180
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0068031.1 protein indeterminate-domain 2-like [Cucumis melo var. makuwa]2.5e-5591.47Show/hide
Query:  RRDSFITHRAFCNALTEESNKLKQGILNNNNNNNNIEPISIISTPKLPHFGTSIMPEFNPYDQKNPFKTLPQELNNSTPTTTTGAPGGLFMVGP-RSNNN
        RRDSFITHRAFCNALTEESNKLKQGIL++NNNNNNIEPISIISTPKLPHFGTSIMPEFNPYDQK PFK+LPQELNNSTP  TTGAPGGLFM G  R+NNN
Subjt:  RRDSFITHRAFCNALTEESNKLKQGILNNNNNNNNIEPISIISTPKLPHFGTSIMPEFNPYDQKNPFKTLPQELNNSTPTTTTGAPGGLFMVGP-RSNNN

Query:  SSSFSSLKLSSTTSSRFSCLYDSKNGCLQ
        SSS SSLKLSSTTSSRFSCLYDSKNGCLQ
Subjt:  SSSFSSLKLSSTTSSRFSCLYDSKNGCLQ

KAE8646332.1 hypothetical protein Csa_016679, partial [Cucumis sativus]1.7e-32100Show/hide
Query:  MPEFNPYDQKNPFKTLPQELNNSTPTTTTGAPGGLFMVGPRSNNNSSSFSSLKLSSTTSSRFSCLYDSKNGCLQ
        MPEFNPYDQKNPFKTLPQELNNSTPTTTTGAPGGLFMVGPRSNNNSSSFSSLKLSSTTSSRFSCLYDSKNGCLQ
Subjt:  MPEFNPYDQKNPFKTLPQELNNSTPTTTTGAPGGLFMVGPRSNNNSSSFSSLKLSSTTSSRFSCLYDSKNGCLQ

XP_004136179.1 zinc finger protein GAI-ASSOCIATED FACTOR 1 [Cucumis sativus]1.7e-64100Show/hide
Query:  RRDSFITHRAFCNALTEESNKLKQGILNNNNNNNNIEPISIISTPKLPHFGTSIMPEFNPYDQKNPFKTLPQELNNSTPTTTTGAPGGLFMVGPRSNNNS
        RRDSFITHRAFCNALTEESNKLKQGILNNNNNNNNIEPISIISTPKLPHFGTSIMPEFNPYDQKNPFKTLPQELNNSTPTTTTGAPGGLFMVGPRSNNNS
Subjt:  RRDSFITHRAFCNALTEESNKLKQGILNNNNNNNNIEPISIISTPKLPHFGTSIMPEFNPYDQKNPFKTLPQELNNSTPTTTTGAPGGLFMVGPRSNNNS

Query:  SSFSSLKLSSTTSSRFSCLYDSKNGCLQ
        SSFSSLKLSSTTSSRFSCLYDSKNGCLQ
Subjt:  SSFSSLKLSSTTSSRFSCLYDSKNGCLQ

XP_008451665.1 PREDICTED: protein indeterminate-domain 2-like [Cucumis melo]2.5e-5591.47Show/hide
Query:  RRDSFITHRAFCNALTEESNKLKQGILNNNNNNNNIEPISIISTPKLPHFGTSIMPEFNPYDQKNPFKTLPQELNNSTPTTTTGAPGGLFMVGP-RSNNN
        RRDSFITHRAFCNALTEESNKLKQGIL++NNNNNNIEPISIISTPKLPHFGTSIMPEFNPYDQK PFK+LPQELNNSTP  TTGAPGGLFM G  R+NNN
Subjt:  RRDSFITHRAFCNALTEESNKLKQGILNNNNNNNNIEPISIISTPKLPHFGTSIMPEFNPYDQKNPFKTLPQELNNSTPTTTTGAPGGLFMVGP-RSNNN

Query:  SSSFSSLKLSSTTSSRFSCLYDSKNGCLQ
        SSS SSLKLSSTTSSRFSCLYDSKNGCLQ
Subjt:  SSSFSSLKLSSTTSSRFSCLYDSKNGCLQ

XP_038876751.1 zinc finger protein GAI-ASSOCIATED FACTOR 1-like [Benincasa hispida]1.5e-5286.36Show/hide
Query:  RRDSFITHRAFCNALTEESNKLKQGILNNNNNNNNIEPISIISTPKLPHFGTSIMPE-FNPYDQKNPFKTLPQELNNST---PTTTTGAPGGLFMVGPRS
        RRDSFITHRAFCNALTEE+NKLKQG L  NNNNNNIEPISIIS+PKLPHFGTSI+PE FNPYD+KNPFK+LPQELNNST   P   TGAPGGLFM GPRS
Subjt:  RRDSFITHRAFCNALTEESNKLKQGILNNNNNNNNIEPISIISTPKLPHFGTSIMPE-FNPYDQKNPFKTLPQELNNST---PTTTTGAPGGLFMVGPRS

Query:  NNNSSSFSSLKLSSTTSSRFSCLYDSKNGCLQ
        +NNSSSFSSLKLSSTTSSRFSCLYDSKN CLQ
Subjt:  NNNSSSFSSLKLSSTTSSRFSCLYDSKNGCLQ

TrEMBL top hitse value%identityAlignment
A0A0A0K5A7 Uncharacterized protein5.4e-72100Show/hide
Query:  MFLCRRDSFITHRAFCNALTEESNKLKQGILNNNNNNNNIEPISIISTPKLPHFGTSIMPEFNPYDQKNPFKTLPQELNNSTPTTTTGAPGGLFMVGPRS
        MFLCRRDSFITHRAFCNALTEESNKLKQGILNNNNNNNNIEPISIISTPKLPHFGTSIMPEFNPYDQKNPFKTLPQELNNSTPTTTTGAPGGLFMVGPRS
Subjt:  MFLCRRDSFITHRAFCNALTEESNKLKQGILNNNNNNNNIEPISIISTPKLPHFGTSIMPEFNPYDQKNPFKTLPQELNNSTPTTTTGAPGGLFMVGPRS

Query:  NNNSSSFSSLKLSSTTSSRFSCLYDSKNGCLQVRAKQRRN
        NNNSSSFSSLKLSSTTSSRFSCLYDSKNGCLQVRAKQRRN
Subjt:  NNNSSSFSSLKLSSTTSSRFSCLYDSKNGCLQVRAKQRRN

A0A1S3BT63 protein indeterminate-domain 2-like1.2e-5591.47Show/hide
Query:  RRDSFITHRAFCNALTEESNKLKQGILNNNNNNNNIEPISIISTPKLPHFGTSIMPEFNPYDQKNPFKTLPQELNNSTPTTTTGAPGGLFMVGP-RSNNN
        RRDSFITHRAFCNALTEESNKLKQGIL++NNNNNNIEPISIISTPKLPHFGTSIMPEFNPYDQK PFK+LPQELNNSTP  TTGAPGGLFM G  R+NNN
Subjt:  RRDSFITHRAFCNALTEESNKLKQGILNNNNNNNNIEPISIISTPKLPHFGTSIMPEFNPYDQKNPFKTLPQELNNSTPTTTTGAPGGLFMVGP-RSNNN

Query:  SSSFSSLKLSSTTSSRFSCLYDSKNGCLQ
        SSS SSLKLSSTTSSRFSCLYDSKNGCLQ
Subjt:  SSSFSSLKLSSTTSSRFSCLYDSKNGCLQ

A0A5C7I3H6 C2H2-type domain-containing protein2.8e-2051.39Show/hide
Query:  RRDSFITHRAFCNALTEESNKLKQGILNNNNNN---NNIE----PISIISTPKLPHFGTSI-MPEFN-PYDQKNPFKTLPQEL--NNSTPTTTTGAPGGL
        RRDSFITHRAFC+AL EE+NK+ Q ++NNNNNN   +NI+    P  ++S+  +P   TSI M +FN  +D KNP K+LPQE+           G  GG+
Subjt:  RRDSFITHRAFCNALTEESNKLKQGILNNNNNN---NNIE----PISIISTPKLPHFGTSI-MPEFN-PYDQKNPFKTLPQEL--NNSTPTTTTGAPGGL

Query:  F-------MVGPRSNNNSSSFSSLKLSSTTSSRFSCLYDSKNGC
        F         GPRSNN SSS SSL+LSS +SS F+ L DSKNGC
Subjt:  F-------MVGPRSNNNSSSFSSLKLSSTTSSRFSCLYDSKNGC

A0A5D3D2F3 Protein indeterminate-domain 2-like1.2e-5591.47Show/hide
Query:  RRDSFITHRAFCNALTEESNKLKQGILNNNNNNNNIEPISIISTPKLPHFGTSIMPEFNPYDQKNPFKTLPQELNNSTPTTTTGAPGGLFMVGP-RSNNN
        RRDSFITHRAFCNALTEESNKLKQGIL++NNNNNNIEPISIISTPKLPHFGTSIMPEFNPYDQK PFK+LPQELNNSTP  TTGAPGGLFM G  R+NNN
Subjt:  RRDSFITHRAFCNALTEESNKLKQGILNNNNNNNNIEPISIISTPKLPHFGTSIMPEFNPYDQKNPFKTLPQELNNSTPTTTTGAPGGLFMVGP-RSNNN

Query:  SSSFSSLKLSSTTSSRFSCLYDSKNGCLQ
        SSS SSLKLSSTTSSRFSCLYDSKNGCLQ
Subjt:  SSSFSSLKLSSTTSSRFSCLYDSKNGCLQ

A0A6J1DL17 protein indeterminate-domain 2-like1.1e-3263.64Show/hide
Query:  RRDSFITHRAFCNALTEESNKLKQGILNNNNNNNNIEPISIISTPKLPHFGTSIMPEFNPYDQKNPFKTLPQELNNSTP---TTTTGAPGGLFMVGPRSN
        RRDSFITHRAFC+ALTEE+NKLKQG++     N+ IEPIS+   PKL  FG S+MPEFN YD KNP K+LP +L+NS P        A GGLFM GP S 
Subjt:  RRDSFITHRAFCNALTEESNKLKQGILNNNNNNNNIEPISIISTPKLPHFGTSIMPEFNPYDQKNPFKTLPQELNNSTP---TTTTGAPGGLFMVGPRSN

Query:  NNSSSFSSLKLSSTTSSRFSCLYDSKNGCLQV
        +NSSSFSSL+LSS  +SRFS L+DSKN C QV
Subjt:  NNSSSFSSLKLSSTTSSRFSCLYDSKNGCLQV

SwissProt top hitse value%identityAlignment
Q700D2 Zinc finger protein JACKDAW6.0e-0447.27Show/hide
Query:  RRDSFITHRAFCNALTEESNKLKQGILNNNN------NNNNIEPISIISTPKLPH
        R+DSFITHRAFC+ALTEE  ++    L+NNN      N N     ++++ P LPH
Subjt:  RRDSFITHRAFCNALTEESNKLKQGILNNNN------NNNNIEPISIISTPKLPH

Q9LRW7 Protein indeterminate-domain 113.2e-0544.07Show/hide
Query:  RRDSFITHRAFCNALTEESNKLKQGILNNNNNNNNIEPISIISTPKLPHFGTSIMPEFN
        RRDSFITHRAFC AL EE+   ++ ++  N NNN   P+ I  +   PH      P  N
Subjt:  RRDSFITHRAFCNALTEESNKLKQGILNNNNNNNNIEPISIISTPKLPHFGTSIMPEFN

Arabidopsis top hitse value%identityAlignment
AT3G13810.1 indeterminate(ID)-domain 112.3e-0644.07Show/hide
Query:  RRDSFITHRAFCNALTEESNKLKQGILNNNNNNNNIEPISIISTPKLPHFGTSIMPEFN
        RRDSFITHRAFC AL EE+   ++ ++  N NNN   P+ I  +   PH      P  N
Subjt:  RRDSFITHRAFCNALTEESNKLKQGILNNNNNNNNIEPISIISTPKLPHFGTSIMPEFN

AT3G13810.2 indeterminate(ID)-domain 112.3e-0644.07Show/hide
Query:  RRDSFITHRAFCNALTEESNKLKQGILNNNNNNNNIEPISIISTPKLPHFGTSIMPEFN
        RRDSFITHRAFC AL EE+   ++ ++  N NNN   P+ I  +   PH      P  N
Subjt:  RRDSFITHRAFCNALTEESNKLKQGILNNNNNNNNIEPISIISTPKLPHFGTSIMPEFN

AT3G13810.3 indeterminate(ID)-domain 112.3e-0644.07Show/hide
Query:  RRDSFITHRAFCNALTEESNKLKQGILNNNNNNNNIEPISIISTPKLPHFGTSIMPEFN
        RRDSFITHRAFC AL EE+   ++ ++  N NNN   P+ I  +   PH      P  N
Subjt:  RRDSFITHRAFCNALTEESNKLKQGILNNNNNNNNIEPISIISTPKLPHFGTSIMPEFN

AT5G03150.1 C2H2-like zinc finger protein4.3e-0547.27Show/hide
Query:  RRDSFITHRAFCNALTEESNKLKQGILNNNN------NNNNIEPISIISTPKLPH
        R+DSFITHRAFC+ALTEE  ++    L+NNN      N N     ++++ P LPH
Subjt:  RRDSFITHRAFCNALTEESNKLKQGILNNNN------NNNNIEPISIISTPKLPH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCTTTGCAGAAGGGACAGCTTCATCACCCACAGAGCCTTTTGCAATGCATTAACAGAAGAAAGCAACAAACTAAAGCAAGGAATTCTCAACAACAACAACAATAA
CAATAACATAGAACCAATCTCAATTATCTCCACTCCAAAGCTTCCTCATTTTGGCACATCAATCATGCCTGAATTCAACCCTTACGATCAAAAAAACCCTTTCAAAACCC
TTCCCCAAGAACTCAACAACTCGACCCCCACCACCACCACAGGTGCACCCGGAGGGTTGTTTATGGTCGGACCCAGAAGCAACAACAATTCTTCCTCTTTCTCAAGCCTT
AAGCTCAGCTCCACCACCTCTTCGCGCTTTAGTTGTCTTTATGATAGTAAAAATGGCTGCCTTCAGGTAAGGGCGAAGCAAAGAAGAAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTCTTTGCAGAAGGGACAGCTTCATCACCCACAGAGCCTTTTGCAATGCATTAACAGAAGAAAGCAACAAACTAAAGCAAGGAATTCTCAACAACAACAACAATAA
CAATAACATAGAACCAATCTCAATTATCTCCACTCCAAAGCTTCCTCATTTTGGCACATCAATCATGCCTGAATTCAACCCTTACGATCAAAAAAACCCTTTCAAAACCC
TTCCCCAAGAACTCAACAACTCGACCCCCACCACCACCACAGGTGCACCCGGAGGGTTGTTTATGGTCGGACCCAGAAGCAACAACAATTCTTCCTCTTTCTCAAGCCTT
AAGCTCAGCTCCACCACCTCTTCGCGCTTTAGTTGTCTTTATGATAGTAAAAATGGCTGCCTTCAGGTAAGGGCGAAGCAAAGAAGAAATTAA
Protein sequenceShow/hide protein sequence
MFLCRRDSFITHRAFCNALTEESNKLKQGILNNNNNNNNIEPISIISTPKLPHFGTSIMPEFNPYDQKNPFKTLPQELNNSTPTTTTGAPGGLFMVGPRSNNNSSSFSSL
KLSSTTSSRFSCLYDSKNGCLQVRAKQRRN