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CSPI07G17580 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G17580
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionKeratin, type I cytoskeletal 9-like
Genome locationChr7:15915156..15915515
RNA-Seq ExpressionCSPI07G17580
SyntenyCSPI07G17580
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067981.1 keratin, type I cytoskeletal 9-like [Cucumis melo var. makuwa]1.6e-1563.75Show/hide
Query:  KIDTTSTIETTNPPELASSIAPVKFEVPINAGDKGLVFGFGKIKNIGSEVISKDHVVNLKDVGRIDVSRSGINNRKIKDG
        KI TT  ++  NPP+L    AP+  +VPINAGD+G VFG GK KN   EV SKD  VNLK+VGRIDVS +GINNRKIKDG
Subjt:  KIDTTSTIETTNPPELASSIAPVKFEVPINAGDKGLVFGFGKIKNIGSEVISKDHVVNLKDVGRIDVSRSGINNRKIKDG

KAE8646351.1 hypothetical protein Csa_023818, partial [Cucumis sativus]6.4e-0448Show/hide
Query:  NPPELASSIAPVKFEVPINAGDKGLVFGFGKIKNIGS-EVISKDHVVNLKDVGRIDVSRSGINNRKIKDGGKNGV
        N  E  + IAPV  + PIN GDK   FG   IK I S  V+SKDH +NLK  G I +S  G    KI   GK GV
Subjt:  NPPELASSIAPVKFEVPINAGDKGLVFGFGKIKNIGS-EVISKDHVVNLKDVGRIDVSRSGINNRKIKDGGKNGV

KGN44951.1 hypothetical protein Csa_015905 [Cucumis sativus]7.1e-3595.24Show/hide
Query:  MMDHLDQVVLEFLQARKIDTTSTIETTNPPELASSIAPVKFEVPINAGDKGLVFGFGKIKNIGSEVISKDHVVNLKDVGRIDVS
        MMDHLDQVVLEFLQARKIDTTS IETTNPPELASSIAPVKFEVPINAGD+GLVFGFGKIKNIGSEVI KDHVVNLK+VGRIDVS
Subjt:  MMDHLDQVVLEFLQARKIDTTSTIETTNPPELASSIAPVKFEVPINAGDKGLVFGFGKIKNIGSEVISKDHVVNLKDVGRIDVS

TYK18142.1 keratin, type I cytoskeletal 9-like [Cucumis melo var. makuwa]1.6e-1563.75Show/hide
Query:  KIDTTSTIETTNPPELASSIAPVKFEVPINAGDKGLVFGFGKIKNIGSEVISKDHVVNLKDVGRIDVSRSGINNRKIKDG
        KI TT  ++  NPP+L    AP+  +VPINAGD+G VFG GK KN   EV SKD  VNLK+VGRIDVS +GINNRKIKDG
Subjt:  KIDTTSTIETTNPPELASSIAPVKFEVPINAGDKGLVFGFGKIKNIGSEVISKDHVVNLKDVGRIDVSRSGINNRKIKDG

TrEMBL top hitse value%identityAlignment
A0A0A0K5J0 Uncharacterized protein3.1e-0448Show/hide
Query:  NPPELASSIAPVKFEVPINAGDKGLVFGFGKIKNIGS-EVISKDHVVNLKDVGRIDVSRSGINNRKIKDGGKNGV
        N  E  + IAPV  + PIN GDK   FG   IK I S  V+SKDH +NLK  G I +S  G    KI   GK GV
Subjt:  NPPELASSIAPVKFEVPINAGDKGLVFGFGKIKNIGS-EVISKDHVVNLKDVGRIDVSRSGINNRKIKDGGKNGV

A0A0A0KAY1 Uncharacterized protein3.4e-3595.24Show/hide
Query:  MMDHLDQVVLEFLQARKIDTTSTIETTNPPELASSIAPVKFEVPINAGDKGLVFGFGKIKNIGSEVISKDHVVNLKDVGRIDVS
        MMDHLDQVVLEFLQARKIDTTS IETTNPPELASSIAPVKFEVPINAGD+GLVFGFGKIKNIGSEVI KDHVVNLK+VGRIDVS
Subjt:  MMDHLDQVVLEFLQARKIDTTSTIETTNPPELASSIAPVKFEVPINAGDKGLVFGFGKIKNIGSEVISKDHVVNLKDVGRIDVS

A0A5A7VQT6 Keratin, type I cytoskeletal 9-like7.9e-1663.75Show/hide
Query:  KIDTTSTIETTNPPELASSIAPVKFEVPINAGDKGLVFGFGKIKNIGSEVISKDHVVNLKDVGRIDVSRSGINNRKIKDG
        KI TT  ++  NPP+L    AP+  +VPINAGD+G VFG GK KN   EV SKD  VNLK+VGRIDVS +GINNRKIKDG
Subjt:  KIDTTSTIETTNPPELASSIAPVKFEVPINAGDKGLVFGFGKIKNIGSEVISKDHVVNLKDVGRIDVSRSGINNRKIKDG

A0A5D3D2L0 Keratin, type I cytoskeletal 9-like7.9e-1663.75Show/hide
Query:  KIDTTSTIETTNPPELASSIAPVKFEVPINAGDKGLVFGFGKIKNIGSEVISKDHVVNLKDVGRIDVSRSGINNRKIKDG
        KI TT  ++  NPP+L    AP+  +VPINAGD+G VFG GK KN   EV SKD  VNLK+VGRIDVS +GINNRKIKDG
Subjt:  KIDTTSTIETTNPPELASSIAPVKFEVPINAGDKGLVFGFGKIKNIGSEVISKDHVVNLKDVGRIDVSRSGINNRKIKDG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGATCATTTGGATCAGGTGGTGTTGGAGTTCTTACAGGCAAGAAAGATTGACACCACATCGACTATAGAAACGACCAACCCTCCAGAATTGGCATCAAGTATTGC
CCCCGTCAAGTTTGAAGTTCCAATTAATGCGGGTGACAAAGGTTTGGTGTTTGGTTTTGGAAAAATCAAGAATATTGGGAGTGAAGTTATTTCTAAGGATCACGTAGTTA
ATTTGAAGGATGTTGGAAGAATCGATGTTTCTCGTAGTGGAATAAATAATCGAAAGATCAAAGATGGTGGTAAAAATGGTGTAAAGGAGCCAAGGGAGAATTGTTGGATA
CAATATCAAAATTGGGTTAATGAGCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGATGGATCATTTGGATCAGGTGGTGTTGGAGTTCTTACAGGCAAGAAAGATTGACACCACATCGACTATAGAAACGACCAACCCTCCAGAATTGGCATCAAGTATTGC
CCCCGTCAAGTTTGAAGTTCCAATTAATGCGGGTGACAAAGGTTTGGTGTTTGGTTTTGGAAAAATCAAGAATATTGGGAGTGAAGTTATTTCTAAGGATCACGTAGTTA
ATTTGAAGGATGTTGGAAGAATCGATGTTTCTCGTAGTGGAATAAATAATCGAAAGATCAAAGATGGTGGTAAAAATGGTGTAAAGGAGCCAAGGGAGAATTGTTGGATA
CAATATCAAAATTGGGTTAATGAGCAATGA
Protein sequenceShow/hide protein sequence
MMDHLDQVVLEFLQARKIDTTSTIETTNPPELASSIAPVKFEVPINAGDKGLVFGFGKIKNIGSEVISKDHVVNLKDVGRIDVSRSGINNRKIKDGGKNGVKEPRENCWI
QYQNWVNEQ