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CSPI07G17630 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G17630
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionprotein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic
Genome locationChr7:15935245..15936820
RNA-Seq ExpressionCSPI07G17630
SyntenyCSPI07G17630
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0019706 - protein-cysteine S-palmitoyltransferase activity (molecular function)
InterPro domainsIPR003425 - CCB3/YggT


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067975.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3 [Cucumis melo var. makuwa]1.4e-5398.25Show/hide
Query:  MAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLVATRKVIPPLGGVDVTPVVWFGLVSFLNEILL
        MAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLL+ATRKVIPPLGGVDVTPVVWFGLVSFLNEILL
Subjt:  MAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLVATRKVIPPLGGVDVTPVVWFGLVSFLNEILL

Query:  GPQGLLVLLSQQLS
        GPQGLLVLLSQQ+S
Subjt:  GPQGLLVLLSQQLS

TYK18148.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3 [Cucumis melo var. makuwa]1.4e-5398.25Show/hide
Query:  MAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLVATRKVIPPLGGVDVTPVVWFGLVSFLNEILL
        MAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLL+ATRKVIPPLGGVDVTPVVWFGLVSFLNEILL
Subjt:  MAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLVATRKVIPPLGGVDVTPVVWFGLVSFLNEILL

Query:  GPQGLLVLLSQQLS
        GPQGLLVLLSQQ+S
Subjt:  GPQGLLVLLSQQLS

XP_004136016.2 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic isoform X1 [Cucumis sativus]1.4e-5398.25Show/hide
Query:  MAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLVATRKVIPPLGGVDVTPVVWFGLVSFLNEILL
        MAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLVATRKVIPPLGGVDVTPVVWFGL+SFLNEILL
Subjt:  MAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLVATRKVIPPLGGVDVTPVVWFGLVSFLNEILL

Query:  GPQGLLVLLSQQLS
        GPQGLLVLLSQQ+S
Subjt:  GPQGLLVLLSQQLS

XP_004136017.2 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic isoform X3 [Cucumis sativus]1.4e-5398.25Show/hide
Query:  MAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLVATRKVIPPLGGVDVTPVVWFGLVSFLNEILL
        MAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLVATRKVIPPLGGVDVTPVVWFGL+SFLNEILL
Subjt:  MAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLVATRKVIPPLGGVDVTPVVWFGLVSFLNEILL

Query:  GPQGLLVLLSQQLS
        GPQGLLVLLSQQ+S
Subjt:  GPQGLLVLLSQQLS

XP_008451549.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic [Cucumis melo]1.4e-5398.25Show/hide
Query:  MAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLVATRKVIPPLGGVDVTPVVWFGLVSFLNEILL
        MAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLL+ATRKVIPPLGGVDVTPVVWFGLVSFLNEILL
Subjt:  MAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLVATRKVIPPLGGVDVTPVVWFGLVSFLNEILL

Query:  GPQGLLVLLSQQLS
        GPQGLLVLLSQQ+S
Subjt:  GPQGLLVLLSQQLS

TrEMBL top hitse value%identityAlignment
A0A0A0K9A7 Uncharacterized protein7.0e-5498.25Show/hide
Query:  MAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLVATRKVIPPLGGVDVTPVVWFGLVSFLNEILL
        MAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLVATRKVIPPLGGVDVTPVVWFGL+SFLNEILL
Subjt:  MAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLVATRKVIPPLGGVDVTPVVWFGLVSFLNEILL

Query:  GPQGLLVLLSQQLS
        GPQGLLVLLSQQ+S
Subjt:  GPQGLLVLLSQQLS

A0A1S3BSI7 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic7.0e-5498.25Show/hide
Query:  MAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLVATRKVIPPLGGVDVTPVVWFGLVSFLNEILL
        MAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLL+ATRKVIPPLGGVDVTPVVWFGLVSFLNEILL
Subjt:  MAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLVATRKVIPPLGGVDVTPVVWFGLVSFLNEILL

Query:  GPQGLLVLLSQQLS
        GPQGLLVLLSQQ+S
Subjt:  GPQGLLVLLSQQLS

A0A5A7VQJ0 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB37.0e-5498.25Show/hide
Query:  MAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLVATRKVIPPLGGVDVTPVVWFGLVSFLNEILL
        MAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLL+ATRKVIPPLGGVDVTPVVWFGLVSFLNEILL
Subjt:  MAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLVATRKVIPPLGGVDVTPVVWFGLVSFLNEILL

Query:  GPQGLLVLLSQQLS
        GPQGLLVLLSQQ+S
Subjt:  GPQGLLVLLSQQLS

A0A5D3D3A7 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB37.0e-5498.25Show/hide
Query:  MAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLVATRKVIPPLGGVDVTPVVWFGLVSFLNEILL
        MAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLL+ATRKVIPPLGGVDVTPVVWFGLVSFLNEILL
Subjt:  MAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLVATRKVIPPLGGVDVTPVVWFGLVSFLNEILL

Query:  GPQGLLVLLSQQLS
        GPQGLLVLLSQQ+S
Subjt:  GPQGLLVLLSQQLS

A0A6J1JL88 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic isoform X12.1e-5092.11Show/hide
Query:  MAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLVATRKVIPPLGGVDVTPVVWFGLVSFLNEILL
        MAASDF N++ LADLDPGTAKLAI FLGP LS FSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLL+ATRKVIPPLGGVDVTPVVWFGLVSFLNEILL
Subjt:  MAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLVATRKVIPPLGGVDVTPVVWFGLVSFLNEILL

Query:  GPQGLLVLLSQQLS
        GPQGLLVLLSQQ+S
Subjt:  GPQGLLVLLSQQLS

SwissProt top hitse value%identityAlignment
Q8RWM7 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic4.9e-4480.73Show/hide
Query:  SDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLVATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQ
        S+ + +++LADLDPGTAKLAI  LGP+LS F FLFI RIVMSWYPKLPV KFPYV+AYAPTEP+LV TRKVIPPL GVDVTPVVWFGLVSFL+EIL+GPQ
Subjt:  SDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLVATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQ

Query:  GLLVLLSQQ
        GLLVL+SQQ
Subjt:  GLLVLLSQQ

Arabidopsis top hitse value%identityAlignment
AT3G07430.1 YGGT family protein3.9e-0426.26Show/hide
Query:  TLADLDPGTAKLAISFLGPS----LSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLVATRKVIPPL-GGVDVTPVVWFGLVSFLNEILLGPQG
        +L D  PG     ++ +       L ++S + + R+++SW+P +P  + P        +P L   R +IPP+   +DV+P++ F ++  L  I+ G  G
Subjt:  TLADLDPGTAKLAISFLGPS----LSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLVATRKVIPPL-GGVDVTPVVWFGLVSFLNEILLGPQG

AT4G27990.1 YGGT family protein3.9e-0429.33Show/hide
Query:  LSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLVATRKVIPPL-GGVDVTPVVWFGLVSFLNEILLGPQG
        L ++S + + R+++SW+P +P  + P        +P L   R +IPP+   +DV+P++ F ++  L  IL   +G
Subjt:  LSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLVATRKVIPPL-GGVDVTPVVWFGLVSFLNEILLGPQG

AT5G36120.1 cofactor assembly, complex C (B6F)3.5e-4580.73Show/hide
Query:  SDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLVATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQ
        S+ + +++LADLDPGTAKLAI  LGP+LS F FLFI RIVMSWYPKLPV KFPYV+AYAPTEP+LV TRKVIPPL GVDVTPVVWFGLVSFL+EIL+GPQ
Subjt:  SDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLVATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQ

Query:  GLLVLLSQQ
        GLLVL+SQQ
Subjt:  GLLVLLSQQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCTCTGATTTTGTGAACAGTATGACTTTGGCCGACCTCGACCCAGGAACGGCAAAGCTTGCGATCAGCTTTCTGGGGCCGTCTCTCTCGGTGTTTTCATTTTT
GTTTATTGCTAGAATAGTAATGTCTTGGTATCCCAAGTTGCCTGTCGGGAAGTTTCCATATGTCATAGCTTATGCCCCCACTGAACCACTTCTAGTTGCAACAAGGAAGG
TGATCCCTCCTCTTGGCGGTGTTGACGTAACACCAGTTGTCTGGTTCGGATTGGTTAGTTTCCTCAATGAGATATTGCTCGGTCCCCAAGGGCTCCTTGTCCTCCTTTCT
CAACAACTCAGCTAA
mRNA sequenceShow/hide mRNA sequence
GACGATAAAGGGATAGCCTTCTCATTCTTTCTCCACCGGAGCTCCTCTGTGAAACCCATGGCTGCCACCGCCTGCTCCTCTCTCAGCTCCATTCGAGTAATAGAGAGGCT
TCAAGTACCATCCTCAAAGAAATCCAAGCTGCAAATTCCAAGCAATCAAATGTAGCTCATCTTTGTTGGGTTCTTTTACCTCTTCCAAGAGTCTTCTGTCACTGGCCTAT
GTCATCCCTCCATTAAAGCCAGCTGCTCCTTACGAAGCTGCAAGGACTATCCCCTTTACCTTGCAAGATGCATCAATGGCTGCCTCTGATTTTGTGAACAGTATGACTTT
GGCCGACCTCGACCCAGGAACGGCAAAGCTTGCGATCAGCTTTCTGGGGCCGTCTCTCTCGGTGTTTTCATTTTTGTTTATTGCTAGAATAGTAATGTCTTGGTATCCCA
AGTTGCCTGTCGGGAAGTTTCCATATGTCATAGCTTATGCCCCCACTGAACCACTTCTAGTTGCAACAAGGAAGGTGATCCCTCCTCTTGGCGGTGTTGACGTAACACCA
GTTGTCTGGTTCGGATTGGTTAGTTTCCTCAATGAGATATTGCTCGGTCCCCAAGGGCTCCTTGTCCTCCTTTCTCAACAACTCAGCTAAATCTTGATGAGAATGCTTAA
GAGAAACATTCTTTTGTTTTTTAGTTCTGTATATGTAACTGTTCTTAGCTGAGCCTCTTTGGTTCCAAAAGGCAAAGAATTTGAAAACTTGAGATTCCTAATGAAGAAAA
TTTTCCTCATCGCAGAGAGT
Protein sequenceShow/hide protein sequence
MAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLVATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLS
QQLS