; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI07G17670 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G17670
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionExopolygalacturonase-like
Genome locationChr7:15949945..15951286
RNA-Seq ExpressionCSPI07G17670
SyntenyCSPI07G17670
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048661.1 exopolygalacturonase-like [Cucumis melo var. makuwa]3.1e-5548.83Show/hide
Query:  AKVVAIFDDTIGTQNLLNEIVPTVNEQFLRPAEAPRCLGISTFLRPAEAPRCLGISTVNDI-----------------------------------WWIA
        AKV A  DD  GT+NLL   VPTVNEQFLRPA APR LGI T          +G STVNDI                                    WIA
Subjt:  AKVVAIFDDTIGTQNLLNEIVPTVNEQFLRPAEAPRCLGISTFLRPAEAPRCLGISTVNDI-----------------------------------WWIA

Query:  ACRSD----KVLDSTRYISIGLVTFPGPCKSFPITLKNQGTMKASRSL-------------------------------------LKTRKLCLLPPRHRR
        ACR+     K L       +G VTF GPCKSFPITL+NQGT+KA+  +                                      K  + C L P    
Subjt:  ACRSD----KVLDSTRYISIGLVTFPGPCKSFPITLKNQGTMKASRSL-------------------------------------LKTRKLCLLPPRHRR

Query:  LFIKFSILNHKIVDGLTSLNNKGFHTSVFYSYNFIATNINIIALAPHNSSNTDGMHISTSTLVTITNNVIGTSDDCVSIGHSSEKITVTNVTCGPGHSL
        + IKFS LNH IVDGLTS+N+ GFHTSVFY YNF ATN+ II  APHNS NTDGMH+STS LVTITN+VIGT DDCVSIGHS+E I VTNVTCGPGH L
Subjt:  LFIKFSILNHKIVDGLTSLNNKGFHTSVFYSYNFIATNINIIALAPHNSSNTDGMHISTSTLVTITNNVIGTSDDCVSIGHSSEKITVTNVTCGPGHSL

XP_031745094.1 exopolygalacturonase-like [Cucumis sativus]5.2e-5548.98Show/hide
Query:  IFDDTIGTQNLLNEIVPTVNEQFLRPAEAPRCLGISTFLRPAEAPRCLGISTVNDI-----------------------------------WWIAACRSD
        +FDD  GTQN L  IVPT NEQFLRPAEAPR LG ST       P   G  TVNDI                                    WIAACR+ 
Subjt:  IFDDTIGTQNLLNEIVPTVNEQFLRPAEAPRCLGISTFLRPAEAPRCLGISTVNDI-----------------------------------WWIAACRSD

Query:  ----KVLDSTRYISIGLVTFPGPCKSFPITLKNQGTMKASRSL-------------------------------------LKTRKLCLLPPRHRRLFIKF
            K L       +G VTF GPCKSFPITL+NQGT+KA+  +                                      K   LC L P    + IKF
Subjt:  ----KVLDSTRYISIGLVTFPGPCKSFPITLKNQGTMKASRSL-------------------------------------LKTRKLCLLPPRHRRLFIKF

Query:  SILNHKIVDGLTSLNNKGFHTSVFYSYNFIATNINIIALAPHNSSNTDGMHISTSTLVTITNNVIGTSDDCVSIGHSSEKITVTNVTCGPGHSL
        + LNH IVDGLTS+N+ GFHTSVFY YNF ATN+ II  APHNS NTDGMH+STS LVTI N+VIGT DDCVSIGHS+E ITVTNVTCGPGH L
Subjt:  SILNHKIVDGLTSLNNKGFHTSVFYSYNFIATNINIIALAPHNSSNTDGMHISTSTLVTITNNVIGTSDDCVSIGHSSEKITVTNVTCGPGHSL

XP_031745095.1 exopolygalacturonase-like [Cucumis sativus]5.2e-5548.98Show/hide
Query:  IFDDTIGTQNLLNEIVPTVNEQFLRPAEAPRCLGISTFLRPAEAPRCLGISTVNDI-----------------------------------WWIAACRSD
        +FDD  GTQN L  IVPT NEQFLRPAEAPR LG ST       P   G  TVNDI                                    WIAACR+ 
Subjt:  IFDDTIGTQNLLNEIVPTVNEQFLRPAEAPRCLGISTFLRPAEAPRCLGISTVNDI-----------------------------------WWIAACRSD

Query:  ----KVLDSTRYISIGLVTFPGPCKSFPITLKNQGTMKASRSL-------------------------------------LKTRKLCLLPPRHRRLFIKF
            K L       +G VTF GPCKSFPITL+NQGT+KA+  +                                      K   LC L P    + IKF
Subjt:  ----KVLDSTRYISIGLVTFPGPCKSFPITLKNQGTMKASRSL-------------------------------------LKTRKLCLLPPRHRRLFIKF

Query:  SILNHKIVDGLTSLNNKGFHTSVFYSYNFIATNINIIALAPHNSSNTDGMHISTSTLVTITNNVIGTSDDCVSIGHSSEKITVTNVTCGPGHSL
        + LNH IVDGLTS+N+ GFHTSVFY YNF ATN+ II  APHNS NTDGMH+STS LVTI N+VIGT DDCVSIGHS+E ITVTNVTCGPGH L
Subjt:  SILNHKIVDGLTSLNNKGFHTSVFYSYNFIATNINIIALAPHNSSNTDGMHISTSTLVTITNNVIGTSDDCVSIGHSSEKITVTNVTCGPGHSL

XP_031745102.1 exopolygalacturonase-like [Cucumis sativus]5.2e-5547.33Show/hide
Query:  CAKVVAIFDDTIGTQNLLNEIVPTVNEQFLRPAEAPRCLGISTFLRPAEAPRCLGISTVNDI-----------------------------------WWI
        CA+  AIF DTI TQ LLN IVP VNEQFLRPAEAP  LG ST          +G  TVNDI                                    WI
Subjt:  CAKVVAIFDDTIGTQNLLNEIVPTVNEQFLRPAEAPRCLGISTFLRPAEAPRCLGISTVNDI-----------------------------------WWI

Query:  AACRSD----KVLDSTRYISIGLVTFPGPCKSFPITLKNQGTMKASRSLLK-------------------------------------TRKLCLLPPRHR
        AACR+     K L       +G VTF GPCKSFPITL+NQGT+KA+  +                                          LC L P   
Subjt:  AACRSD----KVLDSTRYISIGLVTFPGPCKSFPITLKNQGTMKASRSLLK-------------------------------------TRKLCLLPPRHR

Query:  RLFIKFSILNHKIVDGLTSLNNKGFHTSVFYSYNFIATNINIIALAPHNSSNTDGMHISTSTLVTITNNVIGTSDDCVSIGHSSEKITVTNVTCGPGHSL
         + IKFS LNH I+DGLTS+N+ GFHTSVFY YNF ATN+ I   APHNS NTDGMH+STS LVTI+N++IGT DDCVSIGHS+E I +TNVTCGPGH L
Subjt:  RLFIKFSILNHKIVDGLTSLNNKGFHTSVFYSYNFIATNINIIALAPHNSSNTDGMHISTSTLVTITNNVIGTSDDCVSIGHSSEKITVTNVTCGPGHSL

XP_031745103.1 exopolygalacturonase-like [Cucumis sativus]9.8e-6246.35Show/hide
Query:  MCAKVVAIFDDTIGTQNLLNEIVPTVNEQFLRP----AEAPRCLGIST--------------------------------------------FLRPAEAP
        MCAKVVAIFDDT GTQNLLN IVPTVNEQFLRP    AEAPRCLGIST                                            FLRPAEAP
Subjt:  MCAKVVAIFDDTIGTQNLLNEIVPTVNEQFLRP----AEAPRCLGIST--------------------------------------------FLRPAEAP

Query:  RCLGIS-------TVNDI-----------------------------------WWIAACRS----DKVLDSTRYISIGLVTFPGPCKSFPITLKNQGTMK
        R LG S       TVNDI                                    WIAACR+     K L       +G VTF GPCKSFPITL+NQGT+K
Subjt:  RCLGIS-------TVNDI-----------------------------------WWIAACRS----DKVLDSTRYISIGLVTFPGPCKSFPITLKNQGTMK

Query:  ASRSL-------------------------------------LKTRKLCLLPPRHRRLFIKFSILNHKIVDGLTSLNNKGFHTSVFYSYNFIATNINIIA
        A+  +                                      K   LC   P    + IKF+ LNH IVDGLTS+N+ GFHTSVFY YNF ATN+ II 
Subjt:  ASRSL-------------------------------------LKTRKLCLLPPRHRRLFIKFSILNHKIVDGLTSLNNKGFHTSVFYSYNFIATNINIIA

Query:  LAPHNSSNTDGMHISTSTLVTITNNVIGTSDDCVSIGHSSEKITVTNVTCGPGHSL
         APHNS NTDGMH+STS LVTI N++IGT DDCVSIGHS+E IT+TNVTCGPGH L
Subjt:  LAPHNSSNTDGMHISTSTLVTITNNVIGTSDDCVSIGHSSEKITVTNVTCGPGHSL

TrEMBL top hitse value%identityAlignment
A0A0A0K5I2 Uncharacterized protein2.5e-5550Show/hide
Query:  CAKVVAIFDDTIGTQNLLNEIVPTVNEQFLRPAEAPRCLGISTFLRPAEAPRCLGISTVNDI-----------------------------------WWI
        CA+  AIF DTI TQ LLN IVP VNEQFLRPAEAP  LG ST          +G  TVNDI                                    WI
Subjt:  CAKVVAIFDDTIGTQNLLNEIVPTVNEQFLRPAEAPRCLGISTFLRPAEAPRCLGISTVNDI-----------------------------------WWI

Query:  AACRSD----KVLDSTRYISIGLVTFPGPCKSFPITLKNQGTMKASRSLLKTRKLCLLPPRHRRLF---------------IKFSILNHKIVDGLTSLNN
        AACR+     K L       +G VTF GPCKSFPITL+NQGT+KA+  +                F               IKFS LNH I+DGLTS+N+
Subjt:  AACRSD----KVLDSTRYISIGLVTFPGPCKSFPITLKNQGTMKASRSLLKTRKLCLLPPRHRRLF---------------IKFSILNHKIVDGLTSLNN

Query:  KGFHTSVFYSYNFIATNINIIALAPHNSSNTDGMHISTSTLVTITNNVIGTSDDCVSIGHSSEKITVTNVTCGPGHSL
         GFHTSVFY YNF ATN+ I   APHNS NTDGMH+STS LVTI+N++IGT DDCVSIGHS+E I +TNVTCGPGH L
Subjt:  KGFHTSVFYSYNFIATNINIIALAPHNSSNTDGMHISTSTLVTITNNVIGTSDDCVSIGHSSEKITVTNVTCGPGHSL

A0A0A0KMA6 Uncharacterized protein4.6e-4947.14Show/hide
Query:  IVPTVNEQFLRPAEAPRCLGISTFLRPAEAPRCLGISTVNDI-----------------------------------WWIAACRSD----KVLDSTRYIS
        IVPT N+QFLRPAEAPR LG +T       P   G  TVNDI                                    WIAACR+     K L       
Subjt:  IVPTVNEQFLRPAEAPRCLGISTFLRPAEAPRCLGISTVNDI-----------------------------------WWIAACRSD----KVLDSTRYIS

Query:  IGLVTFPGPCKSFPITLKNQGTMKASRSL-------------------------------------LKTRKLCLLPPRHRRLFIKFSILNHKIVDGLTSL
        +G VTF GPCKS+PITL+NQGT+KA+  +                                      K   LC L P    + IKF+ LNH IVDGLTS+
Subjt:  IGLVTFPGPCKSFPITLKNQGTMKASRSL-------------------------------------LKTRKLCLLPPRHRRLFIKFSILNHKIVDGLTSL

Query:  NNKGFHTSVFYSYNFIATNINIIALAPHNSSNTDGMHISTSTLVTITNNVIGTSDDCVSIGHSSEKITVTNVTCGPGHSL
        N+ GFHTSVFY YNF ATN+ II  APHNS NTDGMH+STS LVTI N++IGT DDCVSIGHS+E ITVTNVTCGPGH L
Subjt:  NNKGFHTSVFYSYNFIATNINIIALAPHNSSNTDGMHISTSTLVTITNNVIGTSDDCVSIGHSSEKITVTNVTCGPGHSL

A0A5A7TQ89 Exopolygalacturonase-like9.6e-5548.49Show/hide
Query:  AKVVAIFDDTIGTQNLLNEIVPTVNEQFLRPAEAPRCLGISTFLRPAEAPRCLGISTVNDI-----------------------------------WWIA
        AK  A  DD  GT+NLL   VPTVNEQFLRPA APR LGI T          +G STVNDI                                    WIA
Subjt:  AKVVAIFDDTIGTQNLLNEIVPTVNEQFLRPAEAPRCLGISTFLRPAEAPRCLGISTVNDI-----------------------------------WWIA

Query:  ACRSD----KVLDSTRYISIGLVTFPGPCKSFPITLKNQGTMKASRSL-------------------------------------LKTRKLCLLPPRHRR
        ACR+     K L       +G VTF GPCKSFPITL+NQGT+KA+  +                                      K  + C L P    
Subjt:  ACRSD----KVLDSTRYISIGLVTFPGPCKSFPITLKNQGTMKASRSL-------------------------------------LKTRKLCLLPPRHRR

Query:  LFIKFSILNHKIVDGLTSLNNKGFHTSVFYSYNFIATNINIIALAPHNSSNTDGMHISTSTLVTITNNVIGTSDDCVSIGHSSEKITVTNVTCGPGHSL
        + IKFS LNH IVDGLTS+N+ GFHTSVFY YNF ATN+ II  APHNS NTDGMH+STS LVTITN+VIGT DDCVSIGHS+E I VTNVTCGPGH L
Subjt:  LFIKFSILNHKIVDGLTSLNNKGFHTSVFYSYNFIATNINIIALAPHNSSNTDGMHISTSTLVTITNNVIGTSDDCVSIGHSSEKITVTNVTCGPGHSL

A0A5A7U4W1 Exopolygalacturonase-like1.5e-5548.83Show/hide
Query:  AKVVAIFDDTIGTQNLLNEIVPTVNEQFLRPAEAPRCLGISTFLRPAEAPRCLGISTVNDI-----------------------------------WWIA
        AKV A  DD  GT+NLL   VPTVNEQFLRPA APR LGI T          +G STVNDI                                    WIA
Subjt:  AKVVAIFDDTIGTQNLLNEIVPTVNEQFLRPAEAPRCLGISTFLRPAEAPRCLGISTVNDI-----------------------------------WWIA

Query:  ACRSD----KVLDSTRYISIGLVTFPGPCKSFPITLKNQGTMKASRSL-------------------------------------LKTRKLCLLPPRHRR
        ACR+     K L       +G VTF GPCKSFPITL+NQGT+KA+  +                                      K  + C L P    
Subjt:  ACRSD----KVLDSTRYISIGLVTFPGPCKSFPITLKNQGTMKASRSL-------------------------------------LKTRKLCLLPPRHRR

Query:  LFIKFSILNHKIVDGLTSLNNKGFHTSVFYSYNFIATNINIIALAPHNSSNTDGMHISTSTLVTITNNVIGTSDDCVSIGHSSEKITVTNVTCGPGHSL
        + IKFS LNH IVDGLTS+N+ GFHTSVFY YNF ATN+ II  APHNS NTDGMH+STS LVTITN+VIGT DDCVSIGHS+E I VTNVTCGPGH L
Subjt:  LFIKFSILNHKIVDGLTSLNNKGFHTSVFYSYNFIATNINIIALAPHNSSNTDGMHISTSTLVTITNNVIGTSDDCVSIGHSSEKITVTNVTCGPGHSL

A0A6J1JX85 exopolygalacturonase-like6.2e-4643.43Show/hide
Query:  CAKVVAIFDDTIGTQNLLNEIVPTVNEQFLRPAEAPRCLGISTFLRPAEAPRCLGI-------------STVNDI-------------------WWIAAC
        CA+V A+FD   GT NL++ IV T N+Q  RP  AP  LGI T   PA     + I             + V D+                    WIAAC
Subjt:  CAKVVAIFDDTIGTQNLLNEIVPTVNEQFLRPAEAPRCLGISTFLRPAEAPRCLGI-------------STVNDI-------------------WWIAAC

Query:  RSD----KVLDSTRYISIGLVTFPGPCKSFPITLKNQGTMKASRSL-------------------------------------LKTRKLCLLPPRHRRLF
        R+     K L       +G VTF GPCKS PIT++ QGT+KA+  +                                      K    C + P      
Subjt:  RSD----KVLDSTRYISIGLVTFPGPCKSFPITLKNQGTMKASRSL-------------------------------------LKTRKLCLLPPRHRRLF

Query:  IKFSILNHKIVDGLTSLNNKGFHTSVFYSYNFIATNINIIALAPHNSSNTDGMHISTSTLVTITNNVIGTSDDCVSIGHSSEKITVTNVTCGPGHSL
        IKF+ LNH IVDGLTS+N+KGFHTSVF  YNF ATN+NI  +AP NS NTDGMH+STS LVTI+++ IGT DDCVSIGHS EKITVTNVTCGPGH +
Subjt:  IKFSILNHKIVDGLTSLNNKGFHTSVFYSYNFIATNINIIALAPHNSSNTDGMHISTSTLVTITNNVIGTSDDCVSIGHSSEKITVTNVTCGPGHSL

SwissProt top hitse value%identityAlignment
P26216 Exopolygalacturonase8.5e-1636.22Show/hide
Query:  LKNQGTMKASRSLLKTRKLCLLPPRHRRLFIKFSILNHKIVDGLTSLNNKGFHTSVFYSYNFIATNINIIALAPHNSSNTDGMHISTSTLVTITNNVIGT
        L  QG    S++    +  C + P      +    +N+  V G+T LN+K FH +++   + +  ++ +   AP +S NTDG+H+  S+ +TITN VIG 
Subjt:  LKNQGTMKASRSLLKTRKLCLLPPRHRRLFIKFSILNHKIVDGLTSLNNKGFHTSVFYSYNFIATNINIIALAPHNSSNTDGMHISTSTLVTITNNVIGT

Query:  SDDCVSIGHSSEKITVTNVTCGPGHSL
         DDC+SIG  + K+ +T VTCGPGH +
Subjt:  SDDCVSIGHSSEKITVTNVTCGPGHSL

P35338 Exopolygalacturonase1.7e-1637.01Show/hide
Query:  LKNQGTMKASRSLLKTRKLCLLPPRHRRLFIKFSILNHKIVDGLTSLNNKGFHTSVFYSYNFIATNINIIALAPHNSSNTDGMHISTSTLVTITNNVIGT
        L  QG    S++    +  C + P      +    +N+  V G+T LN+K FH +++   N +  ++ +   AP +S NTDG+H+  S+ +TITN VIG 
Subjt:  LKNQGTMKASRSLLKTRKLCLLPPRHRRLFIKFSILNHKIVDGLTSLNNKGFHTSVFYSYNFIATNINIIALAPHNSSNTDGMHISTSTLVTITNNVIGT

Query:  SDDCVSIGHSSEKITVTNVTCGPGHSL
         DDC+SIG  + K+ +T VTCGPGH +
Subjt:  SDDCVSIGHSSEKITVTNVTCGPGHSL

P35339 Exopolygalacturonase1.3e-1637.8Show/hide
Query:  LKNQGTMKASRSLLKTRKLCLLPPRHRRLFIKFSILNHKIVDGLTSLNNKGFHTSVFYSYNFIATNINIIALAPHNSSNTDGMHISTSTLVTITNNVIGT
        L  QG    S++    +  C + P      +    +N+  V G+T LN+K FH +++   + +  ++N+   AP +S NTDG+H+  S+ VTITN VIG 
Subjt:  LKNQGTMKASRSLLKTRKLCLLPPRHRRLFIKFSILNHKIVDGLTSLNNKGFHTSVFYSYNFIATNINIIALAPHNSSNTDGMHISTSTLVTITNNVIGT

Query:  SDDCVSIGHSSEKITVTNVTCGPGHSL
         DDC+SIG  + K+ +T VTCGPGH +
Subjt:  SDDCVSIGHSSEKITVTNVTCGPGHSL

Q40312 Polygalacturonase2.9e-1650.53Show/hide
Query:  FSILNHKIVDGLTSLNNKGFHTSVFYSYNFIATNINIIALAPHNSSNTDGMHISTSTLVTITNNVIGTSDDCVSIGHSSEKITVTNVTCGPGHSL
        F+ +N+ IV G+TS ++K FH  VF   N       I   AP +S NTDG+H+  ST V I N  IGT DDCVSIG  S++ITV  V CGPGH L
Subjt:  FSILNHKIVDGLTSLNNKGFHTSVFYSYNFIATNINIIALAPHNSSNTDGMHISTSTLVTITNNVIGTSDDCVSIGHSSEKITVTNVTCGPGHSL

Q6H9K0 Exopolygalacturonase (Fragment)5.3e-1835.53Show/hide
Query:  DSTRYISIGLVTFPGPCKSFPITLKNQGTMKASRSLLKTRKLCLLPP--RHRRLFIKFSILNHKIVDGLTSLNNKGFHTSVFYSYNFIATNINIIALAPH
        D +++ S G V+F    +   +T+   GT+         +  C   P  +H  + ++F  L H +V  +TSLN+K FH +V    +    ++ +   AP 
Subjt:  DSTRYISIGLVTFPGPCKSFPITLKNQGTMKASRSLLKTRKLCLLPP--RHRRLFIKFSILNHKIVDGLTSLNNKGFHTSVFYSYNFIATNINIIALAPH

Query:  NSSNTDGMHISTSTLVTITNNVIGTSDDCVSIGHSSEKITVTNVTCGPGHSL
         S NTDG+H+  S  VTITN  I T DDC+SIG  S+ +T+T V CGPGH +
Subjt:  NSSNTDGMHISTSTLVTITNNVIGTSDDCVSIGHSSEKITVTNVTCGPGHSL

Arabidopsis top hitse value%identityAlignment
AT1G02790.1 polygalacturonase 46.6e-1631.66Show/hide
Query:  WIAACRSD---KVLDSTRYISIGLVTFPGPCKSFPITLKNQGTMKASRSLLKT-----------------------------------RKLCLLPPRHRR
        WI  C S     +L        G V F GPCKS  +T+   GT+ A+ S   T                                   +  C LPP    
Subjt:  WIAACRSD---KVLDSTRYISIGLVTFPGPCKSFPITLKNQGTMKASRSLLKT-----------------------------------RKLCLLPPRHRR

Query:  LFIKFSILNHKIVDGLTSLNNKGFHTSVFYSYNFIATNINIIALAPHNSSNTDGMHISTSTLVTITNNVIGTSDDCVSIGHSSEKITVTNVTCGPGHSL
          +KF  + +  ++G++S+N K FH  +  + N    NI +   AP  S NTDG+H+S +  V+I ++ I T DDCVS+G  S  +TV  V CGPGH L
Subjt:  LFIKFSILNHKIVDGLTSLNNKGFHTSVFYSYNFIATNINIIALAPHNSSNTDGMHISTSTLVTITNNVIGTSDDCVSIGHSSEKITVTNVTCGPGHSL

AT2G43880.1 Pectin lyase-like superfamily protein2.5e-1530.96Show/hide
Query:  WIAAC----RSDKVLDSTRYISIGLVTFPGPCKSFPITLKNQGTMKASRS------------LLKTRKLCLLP--------------------PRHRRLF
        W  AC    R+   +    Y+   LV F GPCK+  IT KN GT+ A  +              K  ++ +                      P+  R  
Subjt:  WIAAC----RSDKVLDSTRYISIGLVTFPGPCKSFPITLKNQGTMKASRS------------LLKTRKLCLLP--------------------PRHRRLF

Query:  IKFSILNHKIVDGLTSLNNKGFHTSVFYSYNFIATNINIIALAPHNSSNTDGMHISTSTLVTITNNVIGTSDDCVSIGHSSEKITVTNVTCGPGHSL
        I FS  N+ ++ GL+S N++  H +V +S N    N+ I   AP  S NTDG+H+ +S+ VTI+   I T DDC+++   S  I +  V CGPGH +
Subjt:  IKFSILNHKIVDGLTSLNNKGFHTSVFYSYNFIATNINIIALAPHNSSNTDGMHISTSTLVTITNNVIGTSDDCVSIGHSSEKITVTNVTCGPGHSL

AT3G07820.1 Pectin lyase-like superfamily protein1.9e-1528.35Show/hide
Query:  AACRS---DKVLDSTRYISIGLVTFPGPCKSFPITLKNQGTMKASRSLLKTRKLCLL--------------------------------PPRHRRLFIKF
        +AC+S    KV+       +G +   GPCK+ PI +  QGT+KA  + ++ ++  ++                                  +   + I+F
Subjt:  AACRS---DKVLDSTRYISIGLVTFPGPCKSFPITLKNQGTMKASRSLLKTRKLCLL--------------------------------PPRHRRLFIKF

Query:  SILNHKIVDGLTSLNNKGFHTSVFYSYNFIATNINIIALAPHNSSNTDGMHISTSTLVTITNNVIGTSDDCVSIGHSSEKITVTNVTCGPGHSL
          + +  +  ++S++ K FH +V  + N    NI I+  AP +S NTDG+H+  S  V I N+ I T DDC+S+G   + + V  VTCGPGH +
Subjt:  SILNHKIVDGLTSLNNKGFHTSVFYSYNFIATNINIIALAPHNSSNTDGMHISTSTLVTITNNVIGTSDDCVSIGHSSEKITVTNVTCGPGHSL

AT3G07840.1 Pectin lyase-like superfamily protein3.3e-1527.84Show/hide
Query:  AACR---SDKVLDSTRYISIGLVTFPGPCKSFPITLKNQGTMKASRSLLKTRKLCLLPPR-------------------------HRR-------LFIKF
        +AC+   + KV+ +     +G +   GPCK+ P+ +  QGT+KA    ++ ++  ++  R                         H+        + I+F
Subjt:  AACR---SDKVLDSTRYISIGLVTFPGPCKSFPITLKNQGTMKASRSLLKTRKLCLLPPR-------------------------HRR-------LFIKF

Query:  SILNHKIVDGLTSLNNKGFHTSVFYSYNFIATNINIIALAPHNSSNTDGMHISTSTLVTITNNVIGTSDDCVSIGHSSEKITVTNVTCGPGHSL
          + +  +  ++S++ K FH +V  + N    N+ +I  AP  S NTDG+H+  S  V I N+ I T DDC+S+G   + + V NV CGPGH +
Subjt:  SILNHKIVDGLTSLNNKGFHTSVFYSYNFIATNINIIALAPHNSSNTDGMHISTSTLVTITNNVIGTSDDCVSIGHSSEKITVTNVTCGPGHSL

AT4G18180.1 Pectin lyase-like superfamily protein8.7e-1629.59Show/hide
Query:  WIAACRSD----KVLDSTRYISIGLVTFPGPCKSFP-----------------------------ITLKNQGTMKASRSLLKTRKLCLLPPRHRRL--FI
        W  AC+S      ++      S+G + F GPC +                               +TL   GT     +L      C      + L   +
Subjt:  WIAACRSD----KVLDSTRYISIGLVTFPGPCKSFP-----------------------------ITLKNQGTMKASRSLLKTRKLCLLPPRHRRL--FI

Query:  KFSILNHKIVDGLTSLNNKGFHTSVFYSYNFIATNINIIALAPHNSSNTDGMHISTSTLVTITNNVIGTSDDCVSIGHSSEKITVTNVTCGPGHSL
        KF  +N  +V  ++S+N+K FH ++    +F  T +NI   AP +S NTDG+HI  S+ V  + + I T DDCVSIG  + +IT+T++ CGPGH +
Subjt:  KFSILNHKIVDGLTSLNNKGFHTSVFYSYNFIATNINIIALAPHNSSNTDGMHISTSTLVTITNNVIGTSDDCVSIGHSSEKITVTNVTCGPGHSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGCAAAGGTTGTAGCCATTTTCGATGACACCATCGGCACTCAAAATCTTCTCAATGAGATTGTACCAACAGTAAATGAGCAGTTTCTTCGTCCTGCAGAAGCACC
CCGGTGTCTTGGCATCAGCACGTTTCTTCGTCCTGCAGAAGCACCCCGGTGTCTTGGCATCAGCACGGTGAATGACATTTGGTGGATTGCAGCCTGTCGGTCTGACAAAG
TTCTTGATTCCACAAGGTACATTTCTATTGGTCTGGTGACTTTTCCTGGTCCGTGCAAAAGCTTCCCGATCACTCTCAAAAACCAGGGAACTATGAAGGCTTCCCGATCA
CTCTTGAAAACCAGGAAACTGTGTCTTCTACCGCCAAGGCACCGCCGCTTATTTATTAAGTTTTCCATATTAAACCACAAGATTGTCGATGGGCTAACTTCATTGAATAA
CAAGGGCTTTCACACGTCTGTATTCTACAGCTACAATTTCATTGCTACCAACATCAACATTATAGCTCTAGCTCCACATAATAGCTCCAACACTGATGGAATGCACATTA
GCACCTCAACACTAGTCACAATTACAAACAATGTCATTGGCACCAGTGATGATTGTGTCTCCATTGGCCATAGCAGTGAGAAAATAACAGTCACCAATGTCACTTGCGGC
CCAGGACATAGCCTCAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGTGTGCAAAGGTTGTAGCCATTTTCGATGACACCATCGGCACTCAAAATCTTCTCAATGAGATTGTACCAACAGTAAATGAGCAGTTTCTTCGTCCTGCAGAAGCACC
CCGGTGTCTTGGCATCAGCACGTTTCTTCGTCCTGCAGAAGCACCCCGGTGTCTTGGCATCAGCACGGTGAATGACATTTGGTGGATTGCAGCCTGTCGGTCTGACAAAG
TTCTTGATTCCACAAGGTACATTTCTATTGGTCTGGTGACTTTTCCTGGTCCGTGCAAAAGCTTCCCGATCACTCTCAAAAACCAGGGAACTATGAAGGCTTCCCGATCA
CTCTTGAAAACCAGGAAACTGTGTCTTCTACCGCCAAGGCACCGCCGCTTATTTATTAAGTTTTCCATATTAAACCACAAGATTGTCGATGGGCTAACTTCATTGAATAA
CAAGGGCTTTCACACGTCTGTATTCTACAGCTACAATTTCATTGCTACCAACATCAACATTATAGCTCTAGCTCCACATAATAGCTCCAACACTGATGGAATGCACATTA
GCACCTCAACACTAGTCACAATTACAAACAATGTCATTGGCACCAGTGATGATTGTGTCTCCATTGGCCATAGCAGTGAGAAAATAACAGTCACCAATGTCACTTGCGGC
CCAGGACATAGCCTCAGATAA
Protein sequenceShow/hide protein sequence
MCAKVVAIFDDTIGTQNLLNEIVPTVNEQFLRPAEAPRCLGISTFLRPAEAPRCLGISTVNDIWWIAACRSDKVLDSTRYISIGLVTFPGPCKSFPITLKNQGTMKASRS
LLKTRKLCLLPPRHRRLFIKFSILNHKIVDGLTSLNNKGFHTSVFYSYNFIATNINIIALAPHNSSNTDGMHISTSTLVTITNNVIGTSDDCVSIGHSSEKITVTNVTCG
PGHSLR