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CSPI07G17880 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G17880
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionType B response regulator
Genome locationChr7:16084903..16085434
RNA-Seq ExpressionCSPI07G17880
SyntenyCSPI07G17880
Gene Ontology termsNA
InterPro domainsIPR026737 - Golgin subfamily A member 6-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046668.1 type B response regulator [Cucumis melo var. makuwa]5.9e-2065.62Show/hide
Query:  HHFWLTDMPVNNRSLGREENSA-VPTASINIGEFGESSTGELGGRSVAESGDQNNSFDADEPLQ-RQEIFPRRTRFIWTDEYHRIFVEAVDRLTLQ
        H FWL+DMPV+ R+L  EENSA VPTASI+ GE G S T ELGG S A+ G + N FD DE LQ R  I PRRTRFIWT E H+IFVEAV+ LTLQ
Subjt:  HHFWLTDMPVNNRSLGREENSA-VPTASINIGEFGESSTGELGGRSVAESGDQNNSFDADEPLQ-RQEIFPRRTRFIWTDEYHRIFVEAVDRLTLQ
KAE8646356.1 hypothetical protein Csa_015559 [Cucumis sativus]1.4e-56100Show/hide
Query:  MSDDLNNQPCTSPHHFWLTDMPVNNRSLGREENSAVPTASINIGEFGESSTGELGGRSVAESGDQNNSFDADEPLQRQEIFPRRTRFIWTDEYHRIFVEA
        MSDDLNNQPCTSPHHFWLTDMPVNNRSLGREENSAVPTASINIGEFGESSTGELGGRSVAESGDQNNSFDADEPLQRQEIFPRRTRFIWTDEYHRIFVEA
Subjt:  MSDDLNNQPCTSPHHFWLTDMPVNNRSLGREENSAVPTASINIGEFGESSTGELGGRSVAESGDQNNSFDADEPLQRQEIFPRRTRFIWTDEYHRIFVEA

Query:  VDRLTLQSKC
        VDRLTLQSKC
Subjt:  VDRLTLQSKC
TrEMBL top hitse value%identityAlignment
A0A0A0KB26 Uncharacterized protein1.0e-54100Show/hide
Query:  MSDDLNNQPCTSPHHFWLTDMPVNNRSLGREENSAVPTASINIGEFGESSTGELGGRSVAESGDQNNSFDADEPLQRQEIFPRRTRFIWTDEYHRIFVEA
        MSDDLNNQPCTSPHHFWLTDMPVNNRSLGREENSAVPTASINIGEFGESSTGELGGRSVAESGDQNNSFDADEPLQRQEIFPRRTRFIWTDEYHRIFVEA
Subjt:  MSDDLNNQPCTSPHHFWLTDMPVNNRSLGREENSAVPTASINIGEFGESSTGELGGRSVAESGDQNNSFDADEPLQRQEIFPRRTRFIWTDEYHRIFVEA

Query:  VDRLTLQ
        VDRLTLQ
Subjt:  VDRLTLQ
A0A5D3D1X5 Type B response regulator2.9e-2065.62Show/hide
Query:  HHFWLTDMPVNNRSLGREENSA-VPTASINIGEFGESSTGELGGRSVAESGDQNNSFDADEPLQ-RQEIFPRRTRFIWTDEYHRIFVEAVDRLTLQ
        H FWL+DMPV+ R+L  EENSA VPTASI+ GE G S T ELGG S A+ G + N FD DE LQ R  I PRRTRFIWT E H+IFVEAV+ LTLQ
Subjt:  HHFWLTDMPVNNRSLGREENSA-VPTASINIGEFGESSTGELGGRSVAESGDQNNSFDADEPLQ-RQEIFPRRTRFIWTDEYHRIFVEAVDRLTLQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGACGATCTTAATAATCAACCTTGCACTTCACCTCATCATTTTTGGTTGACGGATATGCCTGTTAACAATAGAAGCTTAGGAAGAGAAGAAAACTCAGCCGTCCC
GACTGCCTCGATCAATATTGGAGAATTTGGTGAATCGTCCACCGGAGAATTGGGTGGTCGGTCCGTGGCAGAAAGTGGAGATCAAAACAATTCTTTTGATGCTGATGAGC
CTTTACAGAGACAAGAAATTTTCCCTAGAAGGACACGTTTCATTTGGACTGATGAATACCATCGAATATTTGTTGAGGCTGTTGATCGTTTAACACTTCAGAGTAAGTGT
TAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCGACGATCTTAATAATCAACCTTGCACTTCACCTCATCATTTTTGGTTGACGGATATGCCTGTTAACAATAGAAGCTTAGGAAGAGAAGAAAACTCAGCCGTCCC
GACTGCCTCGATCAATATTGGAGAATTTGGTGAATCGTCCACCGGAGAATTGGGTGGTCGGTCCGTGGCAGAAAGTGGAGATCAAAACAATTCTTTTGATGCTGATGAGC
CTTTACAGAGACAAGAAATTTTCCCTAGAAGGACACGTTTCATTTGGACTGATGAATACCATCGAATATTTGTTGAGGCTGTTGATCGTTTAACACTTCAGAGTAAGTGT
TAA
Protein sequenceShow/hide protein sequence
MSDDLNNQPCTSPHHFWLTDMPVNNRSLGREENSAVPTASINIGEFGESSTGELGGRSVAESGDQNNSFDADEPLQRQEIFPRRTRFIWTDEYHRIFVEAVDRLTLQSKC