; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI07G17960 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G17960
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionzinc finger protein 6-like
Genome locationChr7:16137745..16138486
RNA-Seq ExpressionCSPI07G17960
SyntenyCSPI07G17960
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009736 - cytokinin-activated signaling pathway (biological process)
GO:0009740 - gibberellic acid mediated signaling pathway (biological process)
GO:0010090 - trichome morphogenesis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily
IPR044299 - Zinc finger protein GIS3/ZFP5/ZFP6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046676.1 zinc finger protein 6-like [Cucumis melo var. makuwa]1.7e-8290.56Show/hide
Query:  MSNHNPSSILKLFGFPLVEHDDNPPETPDG-AGGADTTI-SEDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSN
        MSNHNPSSILKLFGFPLVEHDDNPPETPDG  GGADTTI S+DDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSN
Subjt:  MSNHNPSSILKLFGFPLVEHDDNPPETPDG-AGGADTTI-SEDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSN

Query:  IGGD-----GGASRILHRNNNSNGYFTETAAYGGVSASSGRWMFGNSSEGNMENSGCKLGGEKGLCVDLHLKLSPSNSST
         GGD     GG SRIL R  N NGYF ETAAYGGVSASSGRWMFGNSSEG MENSGCKLGGEKGLCVDLHLKLSPSNSST
Subjt:  IGGD-----GGASRILHRNNNSNGYFTETAAYGGVSASSGRWMFGNSSEGNMENSGCKLGGEKGLCVDLHLKLSPSNSST

KAG7025578.1 Zinc finger protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-5469.23Show/hide
Query:  MSNHNPSSILKLFGFPLVEHDDNPPETPDGAGGADTTISEDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHAA-------------ALRP
        MSN NPSSILKLFGFPLVEHDD PP TPDG GG DT  S+ DRKFRCQFC RVFANSQALGGHQNAHKRERQRAKRALYFHA+             ALRP
Subjt:  MSNHNPSSILKLFGFPLVEHDDNPPETPDGAGGADTTISEDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHAA-------------ALRP

Query:  PSLYSSVFPSNIGGDGGASRILHRNNNSNGYFTETAAYGGVSASSGRWMFGNSSEGNMENSGCKLGGEKGLCVDLHLKLSPS
        P  YSSVFP+NIGG     R L R  + NGYF  TAAYGGVSA SGRWMFGNS EG  + S   +G      VDLHLKLSPS
Subjt:  PSLYSSVFPSNIGGDGGASRILHRNNNSNGYFTETAAYGGVSASSGRWMFGNSSEGNMENSGCKLGGEKGLCVDLHLKLSPS

XP_008451655.1 PREDICTED: zinc finger protein 6-like [Cucumis melo]7.7e-8392.09Show/hide
Query:  MSNHNPSSILKLFGFPLVEHDDNPPETPDG-AGGADTTI-SEDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSN
        MSNHNPSSILKLFGFPLVEHDDNPPETPDG  GGADTTI S+DDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSN
Subjt:  MSNHNPSSILKLFGFPLVEHDDNPPETPDG-AGGADTTI-SEDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSN

Query:  IGGD--GGASRILHRNNNSNGYFTETAAYGGVSASSGRWMFGNSSEGNMENSGCKLGGEKGLCVDLHLKLSPSNSST
         GGD  GG SRIL R  N NGYF ETAAYGGVSASSGRWMFGNSSEG MENSGCKLGGEKGLCVDLHLKLSPSNSST
Subjt:  IGGD--GGASRILHRNNNSNGYFTETAAYGGVSASSGRWMFGNSSEGNMENSGCKLGGEKGLCVDLHLKLSPSNSST

XP_011659780.1 zinc finger protein 6 [Cucumis sativus]2.0e-94100Show/hide
Query:  MSNHNPSSILKLFGFPLVEHDDNPPETPDGAGGADTTISEDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSNIG
        MSNHNPSSILKLFGFPLVEHDDNPPETPDGAGGADTTISEDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSNIG
Subjt:  MSNHNPSSILKLFGFPLVEHDDNPPETPDGAGGADTTISEDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSNIG

Query:  GDGGASRILHRNNNSNGYFTETAAYGGVSASSGRWMFGNSSEGNMENSGCKLGGEKGLCVDLHLKLSPSNSST
        GDGGASRILHRNNNSNGYFTETAAYGGVSASSGRWMFGNSSEGNMENSGCKLGGEKGLCVDLHLKLSPSNSST
Subjt:  GDGGASRILHRNNNSNGYFTETAAYGGVSASSGRWMFGNSSEGNMENSGCKLGGEKGLCVDLHLKLSPSNSST

XP_038896349.1 zinc finger protein 6-like [Benincasa hispida]6.1e-7284.57Show/hide
Query:  MSNHNP-SSILKLFGFPLVEHDDNPPETPDGAGGADTTISEDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSNI
        MSN +P SSILKLFGFPLVEHDDNPPETP+ A G DT   +DDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHAAALRPPSLYS VFP+NI
Subjt:  MSNHNP-SSILKLFGFPLVEHDDNPPETPDGAGGADTTISEDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSNI

Query:  GGDG-GASRILHRNNNSNGYF-TETAAYGGVSASSGRWMFGNSSEGNMENSGCKLGGEKGLCVDLHLKLSPSNSS
        GG G G SRIL R  N NGYF    AAYGGVSASSGRWMFGNS E  MENSGCKLGGEKGLCVDLHLKLSPSNSS
Subjt:  GGDG-GASRILHRNNNSNGYF-TETAAYGGVSASSGRWMFGNSSEGNMENSGCKLGGEKGLCVDLHLKLSPSNSS

TrEMBL top hitse value%identityAlignment
A0A0A0K5R1 C2H2-type domain-containing protein9.5e-95100Show/hide
Query:  MSNHNPSSILKLFGFPLVEHDDNPPETPDGAGGADTTISEDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSNIG
        MSNHNPSSILKLFGFPLVEHDDNPPETPDGAGGADTTISEDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSNIG
Subjt:  MSNHNPSSILKLFGFPLVEHDDNPPETPDGAGGADTTISEDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSNIG

Query:  GDGGASRILHRNNNSNGYFTETAAYGGVSASSGRWMFGNSSEGNMENSGCKLGGEKGLCVDLHLKLSPSNSST
        GDGGASRILHRNNNSNGYFTETAAYGGVSASSGRWMFGNSSEGNMENSGCKLGGEKGLCVDLHLKLSPSNSST
Subjt:  GDGGASRILHRNNNSNGYFTETAAYGGVSASSGRWMFGNSSEGNMENSGCKLGGEKGLCVDLHLKLSPSNSST

A0A1S3BSU1 zinc finger protein 6-like3.7e-8392.09Show/hide
Query:  MSNHNPSSILKLFGFPLVEHDDNPPETPDG-AGGADTTI-SEDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSN
        MSNHNPSSILKLFGFPLVEHDDNPPETPDG  GGADTTI S+DDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSN
Subjt:  MSNHNPSSILKLFGFPLVEHDDNPPETPDG-AGGADTTI-SEDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSN

Query:  IGGD--GGASRILHRNNNSNGYFTETAAYGGVSASSGRWMFGNSSEGNMENSGCKLGGEKGLCVDLHLKLSPSNSST
         GGD  GG SRIL R  N NGYF ETAAYGGVSASSGRWMFGNSSEG MENSGCKLGGEKGLCVDLHLKLSPSNSST
Subjt:  IGGD--GGASRILHRNNNSNGYFTETAAYGGVSASSGRWMFGNSSEGNMENSGCKLGGEKGLCVDLHLKLSPSNSST

A0A5D3D1T3 Zinc finger protein 6-like8.3e-8390.56Show/hide
Query:  MSNHNPSSILKLFGFPLVEHDDNPPETPDG-AGGADTTI-SEDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSN
        MSNHNPSSILKLFGFPLVEHDDNPPETPDG  GGADTTI S+DDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSN
Subjt:  MSNHNPSSILKLFGFPLVEHDDNPPETPDG-AGGADTTI-SEDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSN

Query:  IGGD-----GGASRILHRNNNSNGYFTETAAYGGVSASSGRWMFGNSSEGNMENSGCKLGGEKGLCVDLHLKLSPSNSST
         GGD     GG SRIL R  N NGYF ETAAYGGVSASSGRWMFGNSSEG MENSGCKLGGEKGLCVDLHLKLSPSNSST
Subjt:  IGGD-----GGASRILHRNNNSNGYFTETAAYGGVSASSGRWMFGNSSEGNMENSGCKLGGEKGLCVDLHLKLSPSNSST

A0A6J1JX90 zinc finger protein 6-like3.8e-5171.43Show/hide
Query:  NPSSILKLFGFPLVEHDDNPPETPDGAGGADTTISEDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSNIGGDGG
        N  SILKLFGFPLVEH+   PETP+G+GG     S+DDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFH  ALRPP LY++V+P+NIG  G 
Subjt:  NPSSILKLFGFPLVEHDDNPPETPDGAGGADTTISEDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSNIGGDGG

Query:  ASRILHRNNNSNGYFTETAAYGGVSASSGRWMFGNSSEGNMENSGCKLGGEKGL-----CVDLHLKLS
         SRIL R+ N   YF  TAAYGGVSASSGRWMF     G ME+SGCKL GEKGL      VDLHLKL+
Subjt:  ASRILHRNNNSNGYFTETAAYGGVSASSGRWMFGNSSEGNMENSGCKLGGEKGL-----CVDLHLKLS

A0A6J1KTC7 zinc finger protein GIS3-like1.6e-5469.44Show/hide
Query:  MSNHNPSSILKLFGFPLVEHDDNPPETPDGAGGADTTISEDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFH------AAALRPPSLYSSV
        MSN NPS+ILKLFGFPLVEHDD PP TPDG GG DT  S+ DRKFRCQFC RVFANSQALGGHQNAHKRERQRAKRALYFH      AAALRPP  YSSV
Subjt:  MSNHNPSSILKLFGFPLVEHDDNPPETPDGAGGADTTISEDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFH------AAALRPPSLYSSV

Query:  FPSNIGGDGGASRILHRNNNSNGYFTETAAYGGVSASSGRWMFGNSSEGNMENSGCKLGGEKGL-----CVDLHLKLSPS
        FP++IGG GG         + +GYF  TAAYGGVSA SGRWMFGNS E          GGEKG       VDLHLKLSPS
Subjt:  FPSNIGGDGGASRILHRNNNSNGYFTETAAYGGVSASSGRWMFGNSSEGNMENSGCKLGGEKGL-----CVDLHLKLSPS

SwissProt top hitse value%identityAlignment
Q39264 Zinc finger protein 51.0e-0842.86Show/hide
Query:  SNHNPSSILKLFGFPLVEHDDNPPET--PDGAGGADTTISEDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR
        S  +    +KLFGF L+     P  T     +   +TT     ++  CQ+C + FANSQALGGHQNAHK+ER + KR
Subjt:  SNHNPSSILKLFGFPLVEHDDNPPET--PDGAGGADTTISEDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR

Q39265 Zinc finger protein 61.4e-1050.7Show/hide
Query:  SSILKLFGFPLVEHDDNPPETPDGAGGADTTISEDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA
        +S LKLFG  L+E      ++ +   G+ +    + RK+ CQ+C R FANSQALGGHQNAHK+ERQ  KRA
Subjt:  SSILKLFGFPLVEHDDNPPETPDGAGGADTTISEDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA

Q84WI0 Zinc finger protein GIS6.5e-0835.71Show/hide
Query:  DDNPPETPDGAGGADTTISEDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAL--YFHAAALRPPSLYSSVFPSNIGGDGGASRILHRNNNSNGY
        ++   E   G    D      +R+F C +C R F  SQALGGHQNAHKRERQ AKR +  YF+     P S                    H  + +NG 
Subjt:  DDNPPETPDGAGGADTTISEDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAL--YFHAAALRPPSLYSSVFPSNIGGDGGASRILHRNNNSNGY

Query:  FTETAAYGGVSA
         T   +YGG S+
Subjt:  FTETAAYGGVSA

Q9C9H1 Zinc finger protein GIS32.9e-0872.22Show/hide
Query:  DRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA
        +RK+ CQ+C R F NSQALGGHQNAHK+ERQ+ KRA
Subjt:  DRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA

Q9FG05 Zinc finger protein GIS24.5e-0945.57Show/hide
Query:  LKLFGFPL-VEHDDNPPETPDGAGGADTTISED--DRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR-ALYFHAAA
        ++LFGF     H+++  E+ D     + +I +D  +++F+C +C R F  SQALGGHQNAHKRERQ+ KR  L+ +AAA
Subjt:  LKLFGFPL-VEHDDNPPETPDGAGGADTTISED--DRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR-ALYFHAAA

Arabidopsis top hitse value%identityAlignment
AT1G10480.1 zinc finger protein 57.1e-1042.86Show/hide
Query:  SNHNPSSILKLFGFPLVEHDDNPPET--PDGAGGADTTISEDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR
        S  +    +KLFGF L+     P  T     +   +TT     ++  CQ+C + FANSQALGGHQNAHK+ER + KR
Subjt:  SNHNPSSILKLFGFPLVEHDDNPPET--PDGAGGADTTISEDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR

AT1G67030.1 zinc finger protein 69.9e-1250.7Show/hide
Query:  SSILKLFGFPLVEHDDNPPETPDGAGGADTTISEDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA
        +S LKLFG  L+E      ++ +   G+ +    + RK+ CQ+C R FANSQALGGHQNAHK+ERQ  KRA
Subjt:  SSILKLFGFPLVEHDDNPPETPDGAGGADTTISEDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA

AT1G68360.1 C2H2 and C2HC zinc fingers superfamily protein2.1e-0972.22Show/hide
Query:  DRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA
        +RK+ CQ+C R F NSQALGGHQNAHK+ERQ+ KRA
Subjt:  DRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA

AT3G58070.1 C2H2 and C2HC zinc fingers superfamily protein4.6e-0935.71Show/hide
Query:  DDNPPETPDGAGGADTTISEDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAL--YFHAAALRPPSLYSSVFPSNIGGDGGASRILHRNNNSNGY
        ++   E   G    D      +R+F C +C R F  SQALGGHQNAHKRERQ AKR +  YF+     P S                    H  + +NG 
Subjt:  DDNPPETPDGAGGADTTISEDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAL--YFHAAALRPPSLYSSVFPSNIGGDGGASRILHRNNNSNGY

Query:  FTETAAYGGVSA
         T   +YGG S+
Subjt:  FTETAAYGGVSA

AT5G06650.1 C2H2 and C2HC zinc fingers superfamily protein3.2e-1045.57Show/hide
Query:  LKLFGFPL-VEHDDNPPETPDGAGGADTTISED--DRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR-ALYFHAAA
        ++LFGF     H+++  E+ D     + +I +D  +++F+C +C R F  SQALGGHQNAHKRERQ+ KR  L+ +AAA
Subjt:  LKLFGFPL-VEHDDNPPETPDGAGGADTTISED--DRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR-ALYFHAAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCAATCACAACCCCTCCTCCATCCTAAAGCTTTTTGGCTTCCCATTGGTCGAACACGACGACAATCCCCCGGAGACACCTGACGGCGCCGGTGGCGCTGACACTAC
TATTTCCGAAGACGATAGAAAGTTTCGCTGCCAGTTCTGCCGCCGAGTTTTCGCCAACTCCCAAGCCCTCGGTGGCCACCAGAATGCCCACAAGAGAGAGCGCCAAAGGG
CCAAGCGCGCCCTTTATTTCCACGCCGCCGCACTTCGACCACCATCGCTTTATTCCAGTGTTTTCCCTTCCAACATTGGCGGTGATGGGGGTGCTTCTAGAATTCTGCAT
CGGAACAATAACAGTAACGGGTACTTCACGGAGACGGCGGCGTACGGCGGCGTATCGGCATCATCAGGGAGGTGGATGTTTGGGAATTCGAGTGAAGGAAATATGGAAAA
TTCAGGTTGTAAATTGGGAGGTGAAAAGGGATTGTGTGTTGATCTTCATCTTAAACTCTCTCCATCTAATTCCTCAACTTAA
mRNA sequenceShow/hide mRNA sequence
AAGTTTTAAAAAGGATTTAAATTAAGTTAGTACCTTTTTAATAAGTTGAAAAATAAAATTGTACAATGTGCAATGCTTTCAAAATTCACATCAACAAAGAGAAAGAAAGA
AAGAAAGAAAGAAAGAAAATGGCTATAAATGTAGCCTACATCATCATCATCATCATCAATAAATAAGAGAAAAAAACCATACAAAAACAAATTAAGCTCCGTCCAATAAA
ATGTCCAATCACAACCCCTCCTCCATCCTAAAGCTTTTTGGCTTCCCATTGGTCGAACACGACGACAATCCCCCGGAGACACCTGACGGCGCCGGTGGCGCTGACACTAC
TATTTCCGAAGACGATAGAAAGTTTCGCTGCCAGTTCTGCCGCCGAGTTTTCGCCAACTCCCAAGCCCTCGGTGGCCACCAGAATGCCCACAAGAGAGAGCGCCAAAGGG
CCAAGCGCGCCCTTTATTTCCACGCCGCCGCACTTCGACCACCATCGCTTTATTCCAGTGTTTTCCCTTCCAACATTGGCGGTGATGGGGGTGCTTCTAGAATTCTGCAT
CGGAACAATAACAGTAACGGGTACTTCACGGAGACGGCGGCGTACGGCGGCGTATCGGCATCATCAGGGAGGTGGATGTTTGGGAATTCGAGTGAAGGAAATATGGAAAA
TTCAGGTTGTAAATTGGGAGGTGAAAAGGGATTGTGTGTTGATCTTCATCTTAAACTCTCTCCATCTAATTCCTCAACTTAA
Protein sequenceShow/hide protein sequence
MSNHNPSSILKLFGFPLVEHDDNPPETPDGAGGADTTISEDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSNIGGDGGASRILH
RNNNSNGYFTETAAYGGVSASSGRWMFGNSSEGNMENSGCKLGGEKGLCVDLHLKLSPSNSST