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CSPI07G18270 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G18270
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTranscription factor UPBEAT1
Genome locationChr7:16357305..16358317
RNA-Seq ExpressionCSPI07G18270
SyntenyCSPI07G18270
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046707.1 transcription factor UPBEAT1 [Cucumis melo var. makuwa]1.5e-5986.29Show/hide
Query:  MGVSQETLLQIQLNMEDHQTTQDRIIDIKEIRNNNSNDQSTWKKNSMK----EEEVQEINSKGKDDKSTC-NINTRRPTRRRSRSNSLILKKRSRRSSSS
        MGVSQETLLQIQLNMEDH+TTQDRII IKEIRN++SNDQS WKK SMK    EEE QEINSKGK DKSTC NINTRR TRRRSRSNSLILKKRSRRSSSS
Subjt:  MGVSQETLLQIQLNMEDHQTTQDRIIDIKEIRNNNSNDQSTWKKNSMK----EEEVQEINSKGKDDKSTC-NINTRRPTRRRSRSNSLILKKRSRRSSSS

Query:  SS--SRIEQRVNTLRSLVPNNDNHNHDDHDESC-VGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE
        SS  SRIEQRVN LR+LVPNND  NH D DESC  GSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE
Subjt:  SS--SRIEQRVNTLRSLVPNNDNHNHDDHDESC-VGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE

KAG6575752.1 Transcription factor UPBEAT1, partial [Cucurbita argyrosperma subsp. sororia]4.6e-1649.7Show/hide
Query:  MGVSQETLLQIQLNMEDHQTTQDRIIDIKEIRNNNSNDQSTWKKNSMKEEEVQEINSKGKDDKSTCNINTRRPTRRRSRSNSLILKKRSRRSSSSSSSRI
        MG    TLL +QLNME  + TQD II           + S  KK+SM+EE+        K++KS           RR R  S  L K++RR    SS+RI
Subjt:  MGVSQETLLQIQLNMEDHQTTQDRIIDIKEIRNNNSNDQSTWKKNSMKEEEVQEINSKGKDDKSTCNINTRRPTRRRSRSNSLILKKRSRRSSSSSSSRI

Query:  EQRVNTLRSLVPNNDNHNHDDHDESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSI
         QRV TLR+LVPN +N N +D+++   GSLEQLFT TADYILSLQTRVR M+TLVDVLS  SS I
Subjt:  EQRVNTLRSLVPNNDNHNHDDHDESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSI

KAG6593250.1 Transcription factor UPBEAT1, partial [Cucurbita argyrosperma subsp. sororia]2.2e-1847.85Show/hide
Query:  MGVSQETLLQIQLNMEDHQTTQDRIIDIKEIRNNNSNDQSTWKKNSMKEEEVQEINSKGKDDKSTCNINTRRPTRRRSRSNSLILKKRSRRSSSSSSSRI
        MGV  ETLL +QLNM++                  S D+++ ++   ++E+ ++  +  K              RRR  SNSL+ K+RSR     SS+RI
Subjt:  MGVSQETLLQIQLNMEDHQTTQDRIIDIKEIRNNNSNDQSTWKKNSMKEEEVQEINSKGKDDKSTCNINTRRPTRRRSRSNSLILKKRSRRSSSSSSSRI

Query:  EQRVNTLRSLVPNNDNHNHDDHDESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSS
        EQRV+TLR+LVPN +N+N  ++ ESCVGSLEQLFTQTADYILSLQTRVR MK LVDVLS  S+
Subjt:  EQRVNTLRSLVPNNDNHNHDDHDESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSS

KAG7025601.1 Transcription factor UPBEAT1, partial [Cucurbita argyrosperma subsp. argyrosperma]4.9e-1849.08Show/hide
Query:  MGVSQETLLQIQLNMEDHQTTQDRIIDIKEIRNNNSNDQSTWKKNSMKEEEVQEINSKGKDDKSTCNINTRRPTRRRSRSNSLILKKRSRRSSSSSSSRI
        MGV  ETLL +QLNM++                  S D+++ ++   +++E QE  +K  +             RRR  SNSL+ K+RSR     SS+RI
Subjt:  MGVSQETLLQIQLNMEDHQTTQDRIIDIKEIRNNNSNDQSTWKKNSMKEEEVQEINSKGKDDKSTCNINTRRPTRRRSRSNSLILKKRSRRSSSSSSSRI

Query:  EQRVNTLRSLVPNNDNHNHDDHDESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSS
        EQRV+TLR+LVPN +N+N  ++ ESCVGSLEQLFTQTADYILSLQTRVR MK LVDVLS  S+
Subjt:  EQRVNTLRSLVPNNDNHNHDDHDESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSS

XP_031744332.1 transcription factor UPBEAT1 [Cucumis sativus]9.4e-7898.8Show/hide
Query:  MGVSQETLLQIQLNMEDHQTTQDRIIDIKEIRNNNSNDQSTWKKNSMKEEEVQEINSKGKDDKSTCNINTRRPTRRRSRSNSLILKKRSRRSSSSSSSRI
        MGVSQETLLQIQLNMEDHQTTQDRIIDIKEIRNNNSNDQSTWKKNSMKEEEVQEINSKGKDDKSTCNINTRR TRRRSRSNSLILKKRSRRSSSSSSSRI
Subjt:  MGVSQETLLQIQLNMEDHQTTQDRIIDIKEIRNNNSNDQSTWKKNSMKEEEVQEINSKGKDDKSTCNINTRRPTRRRSRSNSLILKKRSRRSSSSSSSRI

Query:  EQRVNTLRSLVPNNDNHNHDDHDESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE
        EQRVNTLRSLVPNNDNHNHDD DESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE
Subjt:  EQRVNTLRSLVPNNDNHNHDDHDESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE

TrEMBL top hitse value%identityAlignment
A0A0A0K6D9 Uncharacterized protein4.6e-7898.8Show/hide
Query:  MGVSQETLLQIQLNMEDHQTTQDRIIDIKEIRNNNSNDQSTWKKNSMKEEEVQEINSKGKDDKSTCNINTRRPTRRRSRSNSLILKKRSRRSSSSSSSRI
        MGVSQETLLQIQLNMEDHQTTQDRIIDIKEIRNNNSNDQSTWKKNSMKEEEVQEINSKGKDDKSTCNINTRR TRRRSRSNSLILKKRSRRSSSSSSSRI
Subjt:  MGVSQETLLQIQLNMEDHQTTQDRIIDIKEIRNNNSNDQSTWKKNSMKEEEVQEINSKGKDDKSTCNINTRRPTRRRSRSNSLILKKRSRRSSSSSSSRI

Query:  EQRVNTLRSLVPNNDNHNHDDHDESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE
        EQRVNTLRSLVPNNDNHNHDD DESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE
Subjt:  EQRVNTLRSLVPNNDNHNHDDHDESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE

A0A1R3GQR1 Uncharacterized protein8.8e-0539.64Show/hide
Query:  KSTCNINTRRPTRRRSRSNSLILKKRSRRSSSSSSSR------IEQRVNTLRSLVPNNDNHNHDDHDESCVGSLEQLFTQTADYILSLQTRVRLMKTLVD
        K +C    R     R R  S+++K+R R+++    SR      IE+++ TL+ L+PNND       DE     L+ LF +TADYILSLQ RV++M+ +V 
Subjt:  KSTCNINTRRPTRRRSRSNSLILKKRSRRSSSSSSSR------IEQRVNTLRSLVPNNDNHNHDDHDESCVGSLEQLFTQTADYILSLQTRVRLMKTLVD

Query:  VLSDPSSSIDE
        VL+  S S DE
Subjt:  VLSDPSSSIDE

A0A251TGE3 Putative myc-type, basic helix-loop-helix (BHLH) domain-containing protein8.8e-0535.37Show/hide
Query:  HQTTQDRIIDIKEIRNNNSNDQSTWKKNSMKEEEVQEINSKGKDDKSTCNINTRRPTRRRSRSNSLILKKRSRRSSSSSSSR---IEQRVNTLRSLVPNN
        HQT  D +++IK   NNNS+    WKK  + E + +     G+   S       R T  R+ +  +I ++R+RR+    S R   IE++V TL+ L+PN 
Subjt:  HQTTQDRIIDIKEIRNNNSNDQSTWKKNSMKEEEVQEINSKGKDDKSTCNINTRRPTRRRSRSNSLILKKRSRRSSSSSSSR---IEQRVNTLRSLVPNN

Query:  DNHNHDDHDESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDP
        +         S VG L+ LF+ TA+YI +LQ RV +M+ +V+ LS+P
Subjt:  DNHNHDDHDESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDP

A0A5A7TXU1 Transcription factor UPBEAT17.3e-6086.29Show/hide
Query:  MGVSQETLLQIQLNMEDHQTTQDRIIDIKEIRNNNSNDQSTWKKNSMK----EEEVQEINSKGKDDKSTC-NINTRRPTRRRSRSNSLILKKRSRRSSSS
        MGVSQETLLQIQLNMEDH+TTQDRII IKEIRN++SNDQS WKK SMK    EEE QEINSKGK DKSTC NINTRR TRRRSRSNSLILKKRSRRSSSS
Subjt:  MGVSQETLLQIQLNMEDHQTTQDRIIDIKEIRNNNSNDQSTWKKNSMK----EEEVQEINSKGKDDKSTC-NINTRRPTRRRSRSNSLILKKRSRRSSSS

Query:  SS--SRIEQRVNTLRSLVPNNDNHNHDDHDESC-VGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE
        SS  SRIEQRVN LR+LVPNND  NH D DESC  GSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE
Subjt:  SS--SRIEQRVNTLRSLVPNNDNHNHDDHDESC-VGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE

A0A6J5WKV7 Uncharacterized protein5.7e-0444.34Show/hide
Query:  NINTRRPTRRRSRSNSLILKKRS-----RRSSSSSSSRIEQRVNTLRSLVPNNDNHNHDDHDESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDP
        N+ TR P RRR      ILKKR      + S+   S+ I +RV TL+ L+PN D         S +G L+ LF +TADYILSLQ+RVRLM+ ++  L+ P
Subjt:  NINTRRPTRRRSRSNSLILKKRS-----RRSSSSSSSRIEQRVNTLRSLVPNNDNHNHDDHDESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDP

Query:  SSSIDE
         S  DE
Subjt:  SSSIDE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGTTTCCCAAGAAACCCTTTTGCAAATTCAACTCAACATGGAGGATCATCAAACAACACAAGATCGTATCATCGACATCAAAGAGATCAGGAACAACAACTCAAA
TGATCAATCCACGTGGAAGAAAAATTCAATGAAAGAAGAAGAAGTTCAAGAAATTAATAGCAAAGGCAAAGACGACAAAAGCACTTGTAATATTAATACAAGAAGACCAA
CAAGAAGAAGATCAAGAAGCAATTCATTGATATTGAAGAAGAGATCAAGAAGATCATCATCATCATCATCAAGTAGAATAGAGCAAAGGGTCAACACTTTGAGAAGCCTT
GTACCAAACAATGACAACCACAACCACGACGACCACGATGAAAGCTGTGTCGGATCATTAGAACAGCTTTTCACTCAAACAGCTGATTACATACTGTCATTACAAACAAG
AGTCAGATTGATGAAAACTTTGGTTGATGTCTTGTCTGATCCTTCTTCTTCTATTGATGAGTGA
mRNA sequenceShow/hide mRNA sequence
GTTAAAATGAAATAATATATCGTTTAATGACGTGTCAAATGTTGAATAAAAGGAATAGGTATTACTAATTTTTTCCCTATCATCTTCTTTCTCTCCATCTCTTTTCTTTT
TATTTTTCAATTTTCCCCCAACTTATATTCTCTTTCCTCACCAAACCCATTTCACAAATTCCCCCATATAAAACCCCTCTAGCCTCCTCTACCTTCATCATCCAAAATCT
CAATCCCAAACCCCATTTTCCCCTCTCTCTCTCTCTCTCTATTTCTCTAGTTTCTTCACCACAAGTGAAAAAGAAAAGAAAACCAAAAACCAAATGGGAGTTTCCCAAGA
AACCCTTTTGCAAATTCAACTCAACATGGAGGATCATCAAACAACACAAGATCGTATCATCGACATCAAAGAGATCAGGAACAACAACTCAAATGATCAATCCACGTGGA
AGAAAAATTCAATGAAAGAAGAAGAAGTTCAAGAAATTAATAGCAAAGGCAAAGACGACAAAAGCACTTGTAATATTAATACAAGAAGACCAACAAGAAGAAGATCAAGA
AGCAATTCATTGATATTGAAGAAGAGATCAAGAAGATCATCATCATCATCATCAAGTAGAATAGAGCAAAGGGTCAACACTTTGAGAAGCCTTGTACCAAACAATGACAA
CCACAACCACGACGACCACGATGAAAGCTGTGTCGGATCATTAGAACAGCTTTTCACTCAAACAGCTGATTACATACTGTCATTACAAACAAGAGTCAGATTGATGAAAA
CTTTGGTTGATGTCTTGTCTGATCCTTCTTCTTCTATTGATGAGTGAGAGAATTTGAAAGGGAAAAAAAAAAGTTTCATTTTATTTTTTGTTTTCATATATATATTTGTG
TTTAATTTGTGTAAAACTTATATCATTATCTCTCTTCTGTAAAGATTGATATATGTGATTTTATATATATCATTCTTTTGCTTTTCTTTTCTTTTTTTGGTTCTTTTTCT
CTTACCTTTTGCTTTATTGATCA
Protein sequenceShow/hide protein sequence
MGVSQETLLQIQLNMEDHQTTQDRIIDIKEIRNNNSNDQSTWKKNSMKEEEVQEINSKGKDDKSTCNINTRRPTRRRSRSNSLILKKRSRRSSSSSSSRIEQRVNTLRSL
VPNNDNHNHDDHDESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE