; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI07G19220 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G19220
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionNuclear transcription factor Y subunit
Genome locationChr7:16962172..16965647
RNA-Seq ExpressionCSPI07G19220
SyntenyCSPI07G19220
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR001289 - Nuclear transcription factor Y subunit A
IPR018362 - CCAAT-binding factor, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014245.1 Nuclear transcription factor Y subunit A-9 [Cucurbita argyrosperma subsp. argyrosperma]1.2e-15386.39Show/hide
Query:  MPSEPENVDQQVADGAKYLLQSTKFSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQMEL
        MPS+PENVDQQ+ DG+KYL+QSTK+SE WW+GVGNN IAGEDA KT+SAEYLN TV+SG TQ QANDENIGKEVQHLKYIPFS SPPVGE LDLNSQMEL
Subjt:  MPSEPENVDQQVADGAKYLLQSTKFSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQYCQMLTS GPQ+T P IYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNVMSNTNREEDIDSVANHSTKPVSEAVSKYMVTNEKGIKNTLDEQSREFMTQNMQITHAFFNGKSNVHGLSTYSSQLGDVEGGHLDQP
        SGGRFLNTKKPNNV+SNT+REE I+S ANHSTKPV EA SKYMV +E GIK+TL+E+ +EFMTQN+QIT AFFNGK N HG+STY+SQL DVEGGHLDQP
Subjt:  SGGRFLNTKKPNNVMSNTNREEDIDSVANHSTKPVSEAVSKYMVTNEKGIKNTLDEQSREFMTQNMQITHAFFNGKSNVHGLSTYSSQLGDVEGGHLDQP

Query:  HESMQVNGAPQRAIPI
        HESMQVNGAPQRAIPI
Subjt:  HESMQVNGAPQRAIPI

XP_004135933.1 nuclear transcription factor Y subunit A-4 isoform X1 [Cucumis sativus]2.8e-179100Show/hide
Query:  MMPSEPENVDQQVADGAKYLLQSTKFSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQME
        MMPSEPENVDQQVADGAKYLLQSTKFSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQME
Subjt:  MMPSEPENVDQQVADGAKYLLQSTKFSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQME

Query:  LVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRAR
        LVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRAR
Subjt:  LVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRAR

Query:  GSGGRFLNTKKPNNVMSNTNREEDIDSVANHSTKPVSEAVSKYMVTNEKGIKNTLDEQSREFMTQNMQITHAFFNGKSNVHGLSTYSSQLGDVEGGHLDQ
        GSGGRFLNTKKPNNVMSNTNREEDIDSVANHSTKPVSEAVSKYMVTNEKGIKNTLDEQSREFMTQNMQITHAFFNGKSNVHGLSTYSSQLGDVEGGHLDQ
Subjt:  GSGGRFLNTKKPNNVMSNTNREEDIDSVANHSTKPVSEAVSKYMVTNEKGIKNTLDEQSREFMTQNMQITHAFFNGKSNVHGLSTYSSQLGDVEGGHLDQ

Query:  PHESMQVNGAPQRAIPIK
        PHESMQVNGAPQRAIPIK
Subjt:  PHESMQVNGAPQRAIPIK

XP_008461297.1 PREDICTED: nuclear transcription factor Y subunit A-9-like [Cucumis melo]1.1e-17296.54Show/hide
Query:  MMPSEPENVDQQVADGAKYLLQSTKFSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQME
        MMPSEPENVDQQVAD AKYLLQS+K+SEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQME
Subjt:  MMPSEPENVDQQVADGAKYLLQSTKFSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQME

Query:  LVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRAR
        LVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRAR
Subjt:  LVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRAR

Query:  GSGGRFLNTKKPNNVMSNTNREEDIDSVANHSTKPVSEAVSKYMVTNEKGIKNTLDEQSREFMTQNMQITHAFFNGKSNVHGLSTYSSQLGDVEGGHLDQ
        GSGGRFLNTKKPNNVMSNTNREEDI+S ANHSTKPVSE  SKYMVT+EKGIKNTLDEQSRE MTQNMQITHAFFNGKSNVHGLSTY+SQLGDVEGGHLD 
Subjt:  GSGGRFLNTKKPNNVMSNTNREEDIDSVANHSTKPVSEAVSKYMVTNEKGIKNTLDEQSREFMTQNMQITHAFFNGKSNVHGLSTYSSQLGDVEGGHLDQ

Query:  PHESMQVNGAPQRAIPIK
        PHESMQVNGAPQRAIPIK
Subjt:  PHESMQVNGAPQRAIPIK

XP_023547827.1 nuclear transcription factor Y subunit A-4-like isoform X2 [Cucurbita pepo subsp. pepo]3.1e-15486.39Show/hide
Query:  MPSEPENVDQQVADGAKYLLQSTKFSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQMEL
        MPS+PENVDQQ+ DG+KYL+QSTK+SE WWHGVGNNTIAGEDA KT+SA+YLN TV+SG TQ QANDENIGKEVQHLKYIPFSTSPPVGE LDLNSQMEL
Subjt:  MPSEPENVDQQVADGAKYLLQSTKFSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQYCQMLTS GPQ+T P IYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNVMSNTNREEDIDSVANHSTKPVSEAVSKYMVTNEKGIKNTLDEQSREFMTQNMQITHAFFNGKSNVHGLSTYSSQLGDVEGGHLDQP
        SGGRFLNTKKPNNV+SNT+REE I+S  NHSTKPV+EA SKYM  +E GIK+TL+E+ +EFMTQN+QIT AFFNGK N HG+STY+SQL DVEGGHLDQP
Subjt:  SGGRFLNTKKPNNVMSNTNREEDIDSVANHSTKPVSEAVSKYMVTNEKGIKNTLDEQSREFMTQNMQITHAFFNGKSNVHGLSTYSSQLGDVEGGHLDQP

Query:  HESMQVNGAPQRAIPI
        HESMQVNGAPQRAIPI
Subjt:  HESMQVNGAPQRAIPI

XP_038899773.1 nuclear transcription factor Y subunit A-1-like [Benincasa hispida]7.9e-15890.19Show/hide
Query:  MPSEPENVDQQVADGAKYLLQSTKFSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQMEL
        MPS+PENVDQQVADGAKYLLQSTK+SEPWWHGVGNNTI GEDAAKTSSAEYLNVTV SGATQ QANDENIGKEVQHLKYIPFSTSPPVGEHLD NSQMEL
Subjt:  MPSEPENVDQQVADGAKYLLQSTKFSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQY QMLTSYGPQ+TLP IYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVI+SRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNVMSNTNREEDIDSVANHSTKPVSEAVSKYMVTNEKGIKNTLDEQSREFMTQNMQITHAFFNGKSNVHGLSTYSSQLGDVEGGHLDQP
        SGGRFLNTKKPNNV+SNTNREEDI+S ANH TKPVS A  KY V +E  IK+TL+E  RE M  NMQITHAFFNGKSNVHGLSTY+SQL DVEGGHLDQP
Subjt:  SGGRFLNTKKPNNVMSNTNREEDIDSVANHSTKPVSEAVSKYMVTNEKGIKNTLDEQSREFMTQNMQITHAFFNGKSNVHGLSTYSSQLGDVEGGHLDQP

Query:  HESMQVNGAPQRAIPI
        HESMQVNGAPQRAIPI
Subjt:  HESMQVNGAPQRAIPI

TrEMBL top hitse value%identityAlignment
A0A0A0K612 Nuclear transcription factor Y subunit1.3e-179100Show/hide
Query:  MMPSEPENVDQQVADGAKYLLQSTKFSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQME
        MMPSEPENVDQQVADGAKYLLQSTKFSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQME
Subjt:  MMPSEPENVDQQVADGAKYLLQSTKFSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQME

Query:  LVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRAR
        LVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRAR
Subjt:  LVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRAR

Query:  GSGGRFLNTKKPNNVMSNTNREEDIDSVANHSTKPVSEAVSKYMVTNEKGIKNTLDEQSREFMTQNMQITHAFFNGKSNVHGLSTYSSQLGDVEGGHLDQ
        GSGGRFLNTKKPNNVMSNTNREEDIDSVANHSTKPVSEAVSKYMVTNEKGIKNTLDEQSREFMTQNMQITHAFFNGKSNVHGLSTYSSQLGDVEGGHLDQ
Subjt:  GSGGRFLNTKKPNNVMSNTNREEDIDSVANHSTKPVSEAVSKYMVTNEKGIKNTLDEQSREFMTQNMQITHAFFNGKSNVHGLSTYSSQLGDVEGGHLDQ

Query:  PHESMQVNGAPQRAIPIK
        PHESMQVNGAPQRAIPIK
Subjt:  PHESMQVNGAPQRAIPIK

A0A1S3CED9 Nuclear transcription factor Y subunit5.5e-17396.54Show/hide
Query:  MMPSEPENVDQQVADGAKYLLQSTKFSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQME
        MMPSEPENVDQQVAD AKYLLQS+K+SEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQME
Subjt:  MMPSEPENVDQQVADGAKYLLQSTKFSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQME

Query:  LVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRAR
        LVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRAR
Subjt:  LVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRAR

Query:  GSGGRFLNTKKPNNVMSNTNREEDIDSVANHSTKPVSEAVSKYMVTNEKGIKNTLDEQSREFMTQNMQITHAFFNGKSNVHGLSTYSSQLGDVEGGHLDQ
        GSGGRFLNTKKPNNVMSNTNREEDI+S ANHSTKPVSE  SKYMVT+EKGIKNTLDEQSRE MTQNMQITHAFFNGKSNVHGLSTY+SQLGDVEGGHLD 
Subjt:  GSGGRFLNTKKPNNVMSNTNREEDIDSVANHSTKPVSEAVSKYMVTNEKGIKNTLDEQSREFMTQNMQITHAFFNGKSNVHGLSTYSSQLGDVEGGHLDQ

Query:  PHESMQVNGAPQRAIPIK
        PHESMQVNGAPQRAIPIK
Subjt:  PHESMQVNGAPQRAIPIK

A0A5D3CGW1 Nuclear transcription factor Y subunit5.5e-17396.54Show/hide
Query:  MMPSEPENVDQQVADGAKYLLQSTKFSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQME
        MMPSEPENVDQQVAD AKYLLQS+K+SEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQME
Subjt:  MMPSEPENVDQQVADGAKYLLQSTKFSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQME

Query:  LVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRAR
        LVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRAR
Subjt:  LVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRAR

Query:  GSGGRFLNTKKPNNVMSNTNREEDIDSVANHSTKPVSEAVSKYMVTNEKGIKNTLDEQSREFMTQNMQITHAFFNGKSNVHGLSTYSSQLGDVEGGHLDQ
        GSGGRFLNTKKPNNVMSNTNREEDI+S ANHSTKPVSE  SKYMVT+EKGIKNTLDEQSRE MTQNMQITHAFFNGKSNVHGLSTY+SQLGDVEGGHLD 
Subjt:  GSGGRFLNTKKPNNVMSNTNREEDIDSVANHSTKPVSEAVSKYMVTNEKGIKNTLDEQSREFMTQNMQITHAFFNGKSNVHGLSTYSSQLGDVEGGHLDQ

Query:  PHESMQVNGAPQRAIPIK
        PHESMQVNGAPQRAIPIK
Subjt:  PHESMQVNGAPQRAIPIK

A0A6J1GNB7 Nuclear transcription factor Y subunit4.8e-15385.76Show/hide
Query:  MPSEPENVDQQVADGAKYLLQSTKFSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQMEL
        MPS+PENVDQQ+ DG+KYL+QSTK+S  WW+GVGNNTIAGEDA KT+SA+YLN TV+SG TQ Q NDENIGKEVQHLKYIPFS SPPVGE LDLNSQMEL
Subjt:  MPSEPENVDQQVADGAKYLLQSTKFSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQYCQMLTS GPQ+T P IYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNVMSNTNREEDIDSVANHSTKPVSEAVSKYMVTNEKGIKNTLDEQSREFMTQNMQITHAFFNGKSNVHGLSTYSSQLGDVEGGHLDQP
        SGGRFLNTKKPNNV+SNT+REE I+S ANHSTKPVSEA SKYM  +E GIK+TL+E+ +EFMTQN+QIT AFFNGK N HG+STY+SQL DVEGGHLDQP
Subjt:  SGGRFLNTKKPNNVMSNTNREEDIDSVANHSTKPVSEAVSKYMVTNEKGIKNTLDEQSREFMTQNMQITHAFFNGKSNVHGLSTYSSQLGDVEGGHLDQP

Query:  HESMQVNGAPQRAIPI
        HESMQVNGAPQRAIPI
Subjt:  HESMQVNGAPQRAIPI

A0A6J1JW53 Nuclear transcription factor Y subunit7.0e-15285.13Show/hide
Query:  MPSEPENVDQQVADGAKYLLQSTKFSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQMEL
        MPS+PENVDQQ  DG+KYL+QSTK+SE WWHGVGNNTIAGE+A KT+S +YLN TV+SG TQ QANDENIGKEVQHLKYIPFSTSPPVGE LDLNSQMEL
Subjt:  MPSEPENVDQQVADGAKYLLQSTKFSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQYCQMLTS GPQ+T P IYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNVMSNTNREEDIDSVANHSTKPVSEAVSKYMVTNEKGIKNTLDEQSREFMTQNMQITHAFFNGKSNVHGLSTYSSQLGDVEGGHLDQP
        SGGRFLNTKKPNNV+SNT+RE+ I+  ANH TKPV+EA SKYMV +E GIK+TL+E+ +EFMTQN+QIT AFFNGK N HG+STY+SQL DVEG HLDQP
Subjt:  SGGRFLNTKKPNNVMSNTNREEDIDSVANHSTKPVSEAVSKYMVTNEKGIKNTLDEQSREFMTQNMQITHAFFNGKSNVHGLSTYSSQLGDVEGGHLDQP

Query:  HESMQVNGAPQRAIPI
        HESMQVNGAPQRAIPI
Subjt:  HESMQVNGAPQRAIPI

SwissProt top hitse value%identityAlignment
Q84JP1 Nuclear transcription factor Y subunit A-79.7e-2648.94Show/hide
Query:  HSIVLTSYPFSDAQYCQMLTSYGPQ---ATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRAR
        +S+    YP+ D  Y + + +  PQ       ++ G+    +PLP +  EEPV+VNAKQYHGILRRRQSRA+ E + KVIKSRKPYLHESRHLHA+RR R
Subjt:  HSIVLTSYPFSDAQYCQMLTSYGPQ---ATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRAR

Query:  GSGGRFLNTKKPNNVMSNTNREEDIDSVANHSTKPVSEAVS
        G GGRFLN KK +    +++ EE  +  A  S    S   S
Subjt:  GSGGRFLNTKKPNNVMSNTNREEDIDSVANHSTKPVSEAVS

Q8VY64 Nuclear transcription factor Y subunit A-49.7e-2640.98Show/hide
Query:  NDENIGKEVQHLKYIPFSTSPPVGEHLDLNS-QMELVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIY--------GLHHARMPLPLEMEEEPVYVNA
        N+ +  KE    +  P   S    E +D NS   E + H +    YP+ D  Y  +   +  QA LP  Y        G+    +PL  +  EEPV+VNA
Subjt:  NDENIGKEVQHLKYIPFSTSPPVGEHLDLNS-QMELVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIY--------GLHHARMPLPLEMEEEPVYVNA

Query:  KQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTNREEDIDSVANHSTKPVSEAV
        KQYHGILRRRQSRAK E   + IK++KPY+HESRHLHA+RR RG GGRFLN KK N      + +E+ ++ ++ +T   S ++
Subjt:  KQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTNREEDIDSVANHSTKPVSEAV

Q945M9 Nuclear transcription factor Y subunit A-93.1e-3244.08Show/hide
Query:  WH--GVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSP-PVGEHLDLNSQM------------ELVGHSI-VLTSYPFS
        WH      N  +  +A   SS        ++G+  P   D  + KE Q       +TSP   G++ D N +             +LVGH++   +S P+ 
Subjt:  WH--GVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSP-PVGEHLDLNSQM------------ELVGHSI-VLTSYPFS

Query:  DAQYCQMLTSYG--PQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKP
        D  Y  ++ +YG  P   +P   G+ H+RMPLP EM +EPV+VNAKQY  ILRRRQ+RAKAELEKK+IKSRKPYLHESRH HAMRR RG+GGRF   KK 
Subjt:  DAQYCQMLTSYG--PQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKP

Query:  NNVMSNTNREE
        N   S    EE
Subjt:  NNVMSNTNREE

Q9LXV5 Nuclear transcription factor Y subunit A-11.2e-2837.6Show/hide
Query:  MPSEPENVDQQVADGAKYLLQSTKFSEPWW----HGVGNNTIAGEDAAKTSSAEYLNVT----VASGATQPQANDENIG--KEVQHLKYIPFSTSPPVGE
        M S+P   +++  +    + Q   ++EPWW     GV          + +SS +  N +    V S +     N EN G  K+ Q       ++S  V  
Subjt:  MPSEPENVDQQVADGAKYLLQSTKFSEPWW----HGVGNNTIAGEDAAKTSSAEYLNVT----VASGATQPQANDENIG--KEVQHLKYIPFSTSPPVGE

Query:  H----------------LDLNSQMELVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIY-GLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAE
        H                  L    ELVGH I     P+ D  Y  ++ +YG Q    R Y G+   R  LPL+M +EPVYVNAKQY GILRRR++RAKAE
Subjt:  H----------------LDLNSQMELVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIY-GLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAE

Query:  LEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTNREEDIDSVANHS
        LE+KVI+ RKPYLHESRH HAMRRAR SGGRF    +         R+ +  S  N S
Subjt:  LEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTNREEDIDSVANHS

Q9M9X4 Nuclear transcription factor Y subunit A-23.3e-2636Show/hide
Query:  FSEP---WWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKY------IPFSTSPPVGEHLDLNSQMELVGHS--IVLTSYPFS
        FS P   WW   G+  +A E  A  S + +  V V S     Q  D+       HL +       P     P G    + S    +G S   + T YP+ 
Subjt:  FSEP---WWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKY------IPFSTSPPVGEHLDLNSQMELVGHS--IVLTSYPFS

Query:  DAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAE--LEKKVIKS--RKPYLHESRHLHAMRRARGSGGRFLNTK
        + QY  ++++YG Q+            +PL +E E+  +YVN+KQYHGI+RRRQSRAKA   L++K + S  RKPY+H SRHLHA+RR RGSGGRFLNTK
Subjt:  DAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAE--LEKKVIKS--RKPYLHESRHLHAMRRARGSGGRFLNTK

Query:  KPNNVMSNTNREEDIDSVANHS-TKP-VSEAVSKYMVTNEKGIKNTLDEQSREFMTQNMQITHAFFNGKSNVHGL
          N   S TN ++   S+   S  KP  S + +  +V  E G  N     S        ++T   +   S VH L
Subjt:  KPNNVMSNTNREEDIDSVANHS-TKP-VSEAVSKYMVTNEKGIKNTLDEQSREFMTQNMQITHAFFNGKSNVHGL

Arabidopsis top hitse value%identityAlignment
AT3G20910.1 nuclear factor Y, subunit A92.2e-3344.08Show/hide
Query:  WH--GVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSP-PVGEHLDLNSQM------------ELVGHSI-VLTSYPFS
        WH      N  +  +A   SS        ++G+  P   D  + KE Q       +TSP   G++ D N +             +LVGH++   +S P+ 
Subjt:  WH--GVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSP-PVGEHLDLNSQM------------ELVGHSI-VLTSYPFS

Query:  DAQYCQMLTSYG--PQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKP
        D  Y  ++ +YG  P   +P   G+ H+RMPLP EM +EPV+VNAKQY  ILRRRQ+RAKAELEKK+IKSRKPYLHESRH HAMRR RG+GGRF   KK 
Subjt:  DAQYCQMLTSYG--PQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKP

Query:  NNVMSNTNREE
        N   S    EE
Subjt:  NNVMSNTNREE

AT5G12840.1 nuclear factor Y, subunit A18.7e-3037.6Show/hide
Query:  MPSEPENVDQQVADGAKYLLQSTKFSEPWW----HGVGNNTIAGEDAAKTSSAEYLNVT----VASGATQPQANDENIG--KEVQHLKYIPFSTSPPVGE
        M S+P   +++  +    + Q   ++EPWW     GV          + +SS +  N +    V S +     N EN G  K+ Q       ++S  V  
Subjt:  MPSEPENVDQQVADGAKYLLQSTKFSEPWW----HGVGNNTIAGEDAAKTSSAEYLNVT----VASGATQPQANDENIG--KEVQHLKYIPFSTSPPVGE

Query:  H----------------LDLNSQMELVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIY-GLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAE
        H                  L    ELVGH I     P+ D  Y  ++ +YG Q    R Y G+   R  LPL+M +EPVYVNAKQY GILRRR++RAKAE
Subjt:  H----------------LDLNSQMELVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIY-GLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAE

Query:  LEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTNREEDIDSVANHS
        LE+KVI+ RKPYLHESRH HAMRRAR SGGRF    +         R+ +  S  N S
Subjt:  LEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTNREEDIDSVANHS

AT5G12840.2 nuclear factor Y, subunit A16.7e-3037.5Show/hide
Query:  MPSEPENVDQQVADGAKYLLQSTKFSEPWW----HGVGNNTIAGEDAAKTSSAEYLNVT----VASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEH-
        M S+P   +++  +    + Q   ++EPWW     GV          + +SS +  N +    V S +     N EN G      K    +TS     H 
Subjt:  MPSEPENVDQQVADGAKYLLQSTKFSEPWW----HGVGNNTIAGEDAAKTSSAEYLNVT----VASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEH-

Query:  ---------------LDLNSQMELVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIY-GLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELE
                         L    ELVGH I     P+ D  Y  ++ +YG Q    R Y G+   R  LPL+M +EPVYVNAKQY GILRRR++RAKAELE
Subjt:  ---------------LDLNSQMELVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIY-GLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELE

Query:  KKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTNREEDIDSVANHS
        +KVI+ RKPYLHESRH HAMRRAR SGGRF    +         R+ +  S  N S
Subjt:  KKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTNREEDIDSVANHS

AT5G12840.3 nuclear factor Y, subunit A18.7e-3037.6Show/hide
Query:  MPSEPENVDQQVADGAKYLLQSTKFSEPWW----HGVGNNTIAGEDAAKTSSAEYLNVT----VASGATQPQANDENIG--KEVQHLKYIPFSTSPPVGE
        M S+P   +++  +    + Q   ++EPWW     GV          + +SS +  N +    V S +     N EN G  K+ Q       ++S  V  
Subjt:  MPSEPENVDQQVADGAKYLLQSTKFSEPWW----HGVGNNTIAGEDAAKTSSAEYLNVT----VASGATQPQANDENIG--KEVQHLKYIPFSTSPPVGE

Query:  H----------------LDLNSQMELVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIY-GLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAE
        H                  L    ELVGH I     P+ D  Y  ++ +YG Q    R Y G+   R  LPL+M +EPVYVNAKQY GILRRR++RAKAE
Subjt:  H----------------LDLNSQMELVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIY-GLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAE

Query:  LEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTNREEDIDSVANHS
        LE+KVI+ RKPYLHESRH HAMRRAR SGGRF    +         R+ +  S  N S
Subjt:  LEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTNREEDIDSVANHS

AT5G12840.4 nuclear factor Y, subunit A16.7e-3037.5Show/hide
Query:  MPSEPENVDQQVADGAKYLLQSTKFSEPWW----HGVGNNTIAGEDAAKTSSAEYLNVT----VASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEH-
        M S+P   +++  +    + Q   ++EPWW     GV          + +SS +  N +    V S +     N EN G      K    +TS     H 
Subjt:  MPSEPENVDQQVADGAKYLLQSTKFSEPWW----HGVGNNTIAGEDAAKTSSAEYLNVT----VASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEH-

Query:  ---------------LDLNSQMELVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIY-GLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELE
                         L    ELVGH I     P+ D  Y  ++ +YG Q    R Y G+   R  LPL+M +EPVYVNAKQY GILRRR++RAKAELE
Subjt:  ---------------LDLNSQMELVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIY-GLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELE

Query:  KKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTNREEDIDSVANHS
        +KVI+ RKPYLHESRH HAMRRAR SGGRF    +         R+ +  S  N S
Subjt:  KKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTNREEDIDSVANHS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCCATCGGAACCAGAAAATGTAGACCAACAAGTAGCTGATGGGGCGAAGTATTTGCTTCAATCGACTAAATTCTCTGAGCCTTGGTGGCATGGAGTTGGGAACAA
TACCATTGCAGGTGAAGATGCTGCCAAAACATCTTCTGCAGAATACCTGAATGTTACCGTTGCCAGTGGAGCAACGCAGCCACAAGCAAATGATGAAAATATTGGGAAAG
AAGTCCAGCATCTCAAGTATATTCCGTTTTCTACATCCCCACCGGTGGGTGAACACCTTGACCTAAATTCCCAGATGGAACTTGTTGGCCACTCAATTGTTTTGACATCA
TATCCTTTTTCAGATGCACAATATTGTCAAATGCTGACTTCTTATGGACCACAAGCAACGTTACCTCGTATTTATGGACTTCACCATGCTAGGATGCCTTTACCCCTTGA
AATGGAAGAAGAGCCTGTTTATGTAAACGCAAAGCAGTATCATGGTATCTTGAGGAGAAGACAGTCCCGTGCCAAAGCTGAGCTTGAGAAGAAAGTGATAAAAAGTAGAA
AGCCATATCTTCATGAATCCAGACACCTCCATGCTATGAGACGAGCAAGAGGCAGTGGAGGACGATTCCTCAATACCAAAAAGCCCAACAATGTTATGTCCAATACAAAC
AGGGAGGAAGACATCGATTCTGTTGCAAACCATTCAACAAAGCCGGTCAGCGAGGCGGTATCGAAGTACATGGTGACCAATGAAAAAGGAATCAAGAATACACTCGATGA
GCAGAGCAGAGAGTTCATGACACAAAATATGCAGATAACACACGCTTTCTTCAATGGAAAATCTAATGTCCATGGTTTATCCACATACAGTTCACAACTTGGTGATGTCG
AGGGAGGACATCTCGATCAGCCACATGAAAGTATGCAAGTGAATGGGGCTCCACAGAGGGCCATCCCCATCAAATGA
mRNA sequenceShow/hide mRNA sequence
GAGAGAGAGAGAGAGAGAGAGTAATGGAACTGAGCTAGAAGTCCAAAGCGACCTTCAAACTAAACCTCTCTAGGGTTCGATCGTCGGCTTCATAATCACACAACACTTGT
TTTGAATGATGCCATCGGAACCAGAAAATGTAGACCAACAAGTAGCTGATGGGGCGAAGTATTTGCTTCAATCGACTAAATTCTCTGAGCCTTGGTGGCATGGAGTTGGG
AACAATACCATTGCAGGTGAAGATGCTGCCAAAACATCTTCTGCAGAATACCTGAATGTTACCGTTGCCAGTGGAGCAACGCAGCCACAAGCAAATGATGAAAATATTGG
GAAAGAAGTCCAGCATCTCAAGTATATTCCGTTTTCTACATCCCCACCGGTGGGTGAACACCTTGACCTAAATTCCCAGATGGAACTTGTTGGCCACTCAATTGTTTTGA
CATCATATCCTTTTTCAGATGCACAATATTGTCAAATGCTGACTTCTTATGGACCACAAGCAACGTTACCTCGTATTTATGGACTTCACCATGCTAGGATGCCTTTACCC
CTTGAAATGGAAGAAGAGCCTGTTTATGTAAACGCAAAGCAGTATCATGGTATCTTGAGGAGAAGACAGTCCCGTGCCAAAGCTGAGCTTGAGAAGAAAGTGATAAAAAG
TAGAAAGCCATATCTTCATGAATCCAGACACCTCCATGCTATGAGACGAGCAAGAGGCAGTGGAGGACGATTCCTCAATACCAAAAAGCCCAACAATGTTATGTCCAATA
CAAACAGGGAGGAAGACATCGATTCTGTTGCAAACCATTCAACAAAGCCGGTCAGCGAGGCGGTATCGAAGTACATGGTGACCAATGAAAAAGGAATCAAGAATACACTC
GATGAGCAGAGCAGAGAGTTCATGACACAAAATATGCAGATAACACACGCTTTCTTCAATGGAAAATCTAATGTCCATGGTTTATCCACATACAGTTCACAACTTGGTGA
TGTCGAGGGAGGACATCTCGATCAGCCACATGAAAGTATGCAAGTGAATGGGGCTCCACAGAGGGCCATCCCCATCAAATGAAAGTTTCTTGATGGGGAATGGGGCTTCT
CCAACACTGTTTAACCAGTTTCTAGAGCAGAAAACTTGAATACACTCAGTAAAGTATTGAGTGTTGATTCTTGTGAGGAGGCTCTGTTAGTGGTTGGAAGCTGATGGATT
TGCCCTCTTTCTGCTTGGAAGAAAACTGCCTTTTTGGTGGTGTTTCTCAGGCAATTCATTCTTGGCTTTAGTTTGTACTCTGAGGTGAGATTGGAAGAAGATGAAGAAAC
GCAGTGCACCAAGAAAATATGGTACATTCACTGCCTATTTCTTTCCTCTTCAATTTACCTCTTCTATTACTTATGTAGTTCTTATCATGAATGTCTGTCTCATAAAAACA
ATAAAAAATTAAAAAAAAAATGTAAGGTTGAAGACTTTTTAGGTTAATTTAGGTGCAATTGGGTGTTGTATCTATTCAACTTTGTGTGC
Protein sequenceShow/hide protein sequence
MMPSEPENVDQQVADGAKYLLQSTKFSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQMELVGHSIVLTS
YPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTN
REEDIDSVANHSTKPVSEAVSKYMVTNEKGIKNTLDEQSREFMTQNMQITHAFFNGKSNVHGLSTYSSQLGDVEGGHLDQPHESMQVNGAPQRAIPIK