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CSPI07G19490 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G19490
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionHistone H3
Genome locationChr7:17112513..17113189
RNA-Seq ExpressionCSPI07G19490
SyntenyCSPI07G19490
Gene Ontology termsGO:0000786 - nucleosome (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR000164 - Histone H3/CENP-A
IPR007125 - Histone H2A/H2B/H3
IPR009072 - Histone-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY31042.1 Histone superfamily protein [Theobroma cacao]6.3e-64100Show/hide
Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

XP_016690064.1 histone H3.2 [Gossypium hirsutum]6.3e-64100Show/hide
Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

XP_018474324.1 PREDICTED: histone H3-like centromeric protein CSE4 [Raphanus sativus]6.3e-64100Show/hide
Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

XP_022154562.1 uncharacterized protein LOC111021800 [Momordica charantia]6.3e-64100Show/hide
Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

XP_030970207.1 uncharacterized protein LOC115990517 [Quercus lobata]6.3e-64100Show/hide
Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

TrEMBL top hitse value%identityAlignment
A0A059AF37 Histone H33.1e-64100Show/hide
Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

A0A1U7XR83 Histone H33.1e-64100Show/hide
Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

C5XPA5 Histone H33.1e-64100Show/hide
Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

K4AY75 Histone H33.1e-64100Show/hide
Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

M5WKJ0 Histone H33.1e-64100Show/hide
Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

SwissProt top hitse value%identityAlignment
P59226 Histone H3.28.3e-67100Show/hide
Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

P69246 Histone H3.28.3e-67100Show/hide
Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

Q6LBE3 Histone H3.28.3e-67100Show/hide
Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

Q6LCK1 Histone H3.28.3e-67100Show/hide
Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

Q71T45 Histone H3.28.3e-67100Show/hide
Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

Arabidopsis top hitse value%identityAlignment
AT1G09200.1 Histone superfamily protein5.9e-68100Show/hide
Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

AT3G27360.1 Histone superfamily protein5.9e-68100Show/hide
Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

AT5G10390.1 Histone superfamily protein5.9e-68100Show/hide
Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

AT5G10400.1 Histone superfamily protein5.9e-68100Show/hide
Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

AT5G65360.1 Histone superfamily protein5.9e-68100Show/hide
Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCGCACCAAGCAGACAGCCAGAAAATCTACCGGAGGCAAGGCTCCGAGGAAGCAACTCGCCACCAAAGCAGCCAGGAAGTCAGCTCCGGCTACCGGTGGAGTGAA
GAAGCCACATCGCTTCCGTCCTGGAACCGTCGCACTTCGAGAAATCAGGAAGTACCAGAAGAGCACTGAGCTTTTGATCCGGAAACTTCCGTTTCAACGTTTGGTTCGCG
AAATTGCTCAGGATTTCAAGACCGATCTGAGGTTTCAGAGCAGTGCCGTGGCGGCACTTCAGGAGGCCGCGGAGGCCTACTTGGTTGGTTTGTTCGAAGACACGAATCTT
TGTGCGATTCATGCCAAGAGAGTTACGATTATGCCTAAGGATATTCAATTGGCTAGAAGGATTAGAGGGGAAAGGGCTTAA
mRNA sequenceShow/hide mRNA sequence
CACCCCCCATTTTCTTAATCATCACAACCAAAATCTCAGTTCAACCTTCCAAATTCTTCAATTTTCGTCAAATCAATTTCCCCGAATGGCTCGCACCAAGCAGACAGCCA
GAAAATCTACCGGAGGCAAGGCTCCGAGGAAGCAACTCGCCACCAAAGCAGCCAGGAAGTCAGCTCCGGCTACCGGTGGAGTGAAGAAGCCACATCGCTTCCGTCCTGGA
ACCGTCGCACTTCGAGAAATCAGGAAGTACCAGAAGAGCACTGAGCTTTTGATCCGGAAACTTCCGTTTCAACGTTTGGTTCGCGAAATTGCTCAGGATTTCAAGACCGA
TCTGAGGTTTCAGAGCAGTGCCGTGGCGGCACTTCAGGAGGCCGCGGAGGCCTACTTGGTTGGTTTGTTCGAAGACACGAATCTTTGTGCGATTCATGCCAAGAGAGTTA
CGATTATGCCTAAGGATATTCAATTGGCTAGAAGGATTAGAGGGGAAAGGGCTTAAAGTTGTGGATTAATTTTTTAAAAATATTTTTTGAGTTCATTTGGTGTCTAGGGC
TTTAGATTGCTTCAGGTTGGATGTATGTGTGAATCTTGAATCTGCTTACTGAATGAATCACCGTTTTGGAATTGGATCTTTTTTTGTTCGTATATCCTTGTTGAATGCCT
TATTTACATTCTATAAA
Protein sequenceShow/hide protein sequence
MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNL
CAIHAKRVTIMPKDIQLARRIRGERA