CuGenDBv2

Gene ID	CSPI07G20100
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	protein LOW PSII ACCUMULATION 3, chloroplastic
Genome location	Chr7:17552613..17557831
RNA-Seq Expression	CSPI07G20100
Synteny	CSPI07G20100
Gene Ontology terms	NA
InterPro domains	IPR018962 - Domain of unknown function DUF1995 IPR044687 - Protein LOW PSII ACCUMULATION 3

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0058708.1 protein LOW PSII ACCUMULATION 3 [Cucumis melo var. makuwa]

7.2e-214

97.16

Show/hide

Query:  MAIMAFLSSPPHIPSLSPPFHTNFLFSPISSSLRRSTRSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL
        M IMAFLSSPP+IPSLS PFH+NFLFSPISSSLRRST SSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL
Subjt:  MAIMAFLSSPPHIPSLSPPFHTNFLFSPISSSLRRSTRSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL

Query:  EDGKMRLEIDFPPLPSNISSYKGSSDDFIDANIQLALAVARNLQEKRGIRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRSVRN
        EDGKMRLEIDFPPLPSNISSYKGSSD+FIDANIQLALAVARNLQEKRG RSCIVFPDKPEKRRAS+LFKTA+DSIDGITVSSLDDVPAG VTSFFRSVRN
Subjt:  EDGKMRLEIDFPPLPSNISSYKGSSDDFIDANIQLALAVARNLQEKRGIRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRSVRN

Query:  TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPALLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAP
        TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIP LLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAP
Subjt:  TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPALLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAP

Query:  YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
        YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
Subjt:  YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

XP_004135877.1 protein LOW PSII ACCUMULATION 3, chloroplastic [Cucumis sativus]

8.2e-218

99.23

Show/hide

Query:  MAIMAFLSSPPHIPSLSPPFHTNFLFSPISSSLRRSTRSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL
        MAIMAFLSSPPHIPSLSPPFHTNFLFSPISSSLRRSTRSSLFGAQTLAASGFCFRIHC DKERAAPVTQ SDPKAGVPIYKPKTYEVLVSDAANSLAYAL
Subjt:  MAIMAFLSSPPHIPSLSPPFHTNFLFSPISSSLRRSTRSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL

Query:  EDGKMRLEIDFPPLPSNISSYKGSSDDFIDANIQLALAVARNLQEKRGIRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRSVRN
        EDGKMRLEIDFPPLPSNISSYKGSSDDFIDANIQLALAVARNLQEKRGIRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRSVRN
Subjt:  EDGKMRLEIDFPPLPSNISSYKGSSDDFIDANIQLALAVARNLQEKRGIRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRSVRN

Query:  TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPALLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAP
        TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPALLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAP
Subjt:  TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPALLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAP

Query:  YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
        YIVNYSGALFRQY GPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
Subjt:  YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

XP_008461181.1 PREDICTED: protein LOW PSII ACCUMULATION 3, chloroplastic [Cucumis melo]

1.0e-212

96.65

Show/hide

Query:  MAIMAFLSSPPHIPSLSPPFHTNFLFSPISSSLRRSTRSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL
        M IMAF+SSPP+IPSLS PF +NFLFSPISSSLRRST SSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL
Subjt:  MAIMAFLSSPPHIPSLSPPFHTNFLFSPISSSLRRSTRSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL

Query:  EDGKMRLEIDFPPLPSNISSYKGSSDDFIDANIQLALAVARNLQEKRGIRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRSVRN
        EDGKMRLEIDFPPLPSNISSYKGSSD+FIDANIQLALAVARNLQEKRG RSCIVFPDKPEKRRAS+LFKTA+DSIDGITVSSLDDVPAG VTSFFRSVRN
Subjt:  EDGKMRLEIDFPPLPSNISSYKGSSDDFIDANIQLALAVARNLQEKRGIRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRSVRN

Query:  TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPALLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAP
        TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIP LLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAP
Subjt:  TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPALLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAP

Query:  YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
        YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
Subjt:  YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

XP_022992481.1 protein LOW PSII ACCUMULATION 3, chloroplastic [Cucurbita maxima]

3.8e-207

93.09

Show/hide

Query:  MAIMAFLSSPPHIPSLSPPFHTNFLFSPISSS---LRRSTRSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA
        MAIMAFLSSPPHIPSL  PFH+NFLFSPISSS   LRRSTRSSLFGAQTLA SGFCFRIHC DKERAAPVT+SSDPKAGVPIYKPKTYEVLVSDAANSLA
Subjt:  MAIMAFLSSPPHIPSLSPPFHTNFLFSPISSS---LRRSTRSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA

Query:  YALEDGKMRLEIDFPPLPSNISSYKGSSDDFIDANIQLALAVARNLQEKRGIRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRS
        YALEDGKMRLEIDFPPLPSNISSYKGSSD+FIDANIQLALAVARNLQEKRG RSCIVFPDKP+K RASQLFKTALDSIDGIT+SSLDD+PAG VTSFFRS
Subjt:  YALEDGKMRLEIDFPPLPSNISSYKGSSDDFIDANIQLALAVARNLQEKRGIRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRS

Query:  VRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPALLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA
        +RNTLDFDFED+NAGRWTSS+PPSLYIFINCSTREL +IEKYVETFASSIP L+FNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTV 
Subjt:  VRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPALLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA

Query:  VAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
        +APYIVNYSGALFRQYPGPWQVMLKQ+DNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEED DSEVSSAWRS
Subjt:  VAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

XP_038900014.1 protein LOW PSII ACCUMULATION 3, chloroplastic [Benincasa hispida]

3.7e-210

95.4

Show/hide

Query:  MAIMAFLSSPPHIPSLSPPFHTNFLFSPISSS---LRRSTRSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA
        MAIMAF+SSPP IPSLS  FH+NFLFSPISSS   LRRSTRSSLFGAQTLA SGFCFRIHCRDKER +PVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA
Subjt:  MAIMAFLSSPPHIPSLSPPFHTNFLFSPISSS---LRRSTRSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA

Query:  YALEDGKMRLEIDFPPLPSNISSYKGSSDDFIDANIQLALAVARNLQEKRGIRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRS
        YALEDGK+RLEIDFPPLPSNISSYKGSSD+FIDANIQLALAVARNLQEKRG RSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAG VTSFFRS
Subjt:  YALEDGKMRLEIDFPPLPSNISSYKGSSDDFIDANIQLALAVARNLQEKRGIRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRS

Query:  VRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPALLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA
        VRNTLDFDFED+N+GRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIP LLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA
Subjt:  VRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPALLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA

Query:  VAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
        VAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
Subjt:  VAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KA03 DUF1995 domain-containing protein

4.0e-218

99.23

Show/hide

Query:  MAIMAFLSSPPHIPSLSPPFHTNFLFSPISSSLRRSTRSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL
        MAIMAFLSSPPHIPSLSPPFHTNFLFSPISSSLRRSTRSSLFGAQTLAASGFCFRIHC DKERAAPVTQ SDPKAGVPIYKPKTYEVLVSDAANSLAYAL
Subjt:  MAIMAFLSSPPHIPSLSPPFHTNFLFSPISSSLRRSTRSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL

Query:  EDGKMRLEIDFPPLPSNISSYKGSSDDFIDANIQLALAVARNLQEKRGIRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRSVRN
        EDGKMRLEIDFPPLPSNISSYKGSSDDFIDANIQLALAVARNLQEKRGIRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRSVRN
Subjt:  EDGKMRLEIDFPPLPSNISSYKGSSDDFIDANIQLALAVARNLQEKRGIRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRSVRN

Query:  TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPALLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAP
        TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPALLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAP
Subjt:  TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPALLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAP

Query:  YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
        YIVNYSGALFRQY GPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
Subjt:  YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

A0A1S3CFB8 protein LOW PSII ACCUMULATION 3, chloroplastic

5.0e-213

96.65

Show/hide

Query:  MAIMAFLSSPPHIPSLSPPFHTNFLFSPISSSLRRSTRSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL
        M IMAF+SSPP+IPSLS PF +NFLFSPISSSLRRST SSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL
Subjt:  MAIMAFLSSPPHIPSLSPPFHTNFLFSPISSSLRRSTRSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL

Query:  EDGKMRLEIDFPPLPSNISSYKGSSDDFIDANIQLALAVARNLQEKRGIRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRSVRN
        EDGKMRLEIDFPPLPSNISSYKGSSD+FIDANIQLALAVARNLQEKRG RSCIVFPDKPEKRRAS+LFKTA+DSIDGITVSSLDDVPAG VTSFFRSVRN
Subjt:  EDGKMRLEIDFPPLPSNISSYKGSSDDFIDANIQLALAVARNLQEKRGIRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRSVRN

Query:  TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPALLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAP
        TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIP LLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAP
Subjt:  TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPALLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAP

Query:  YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
        YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
Subjt:  YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

A0A5A7UU42 Protein LOW PSII ACCUMULATION 3

3.5e-214

97.16

Show/hide

Query:  MAIMAFLSSPPHIPSLSPPFHTNFLFSPISSSLRRSTRSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL
        M IMAFLSSPP+IPSLS PFH+NFLFSPISSSLRRST SSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL
Subjt:  MAIMAFLSSPPHIPSLSPPFHTNFLFSPISSSLRRSTRSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL

Query:  EDGKMRLEIDFPPLPSNISSYKGSSDDFIDANIQLALAVARNLQEKRGIRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRSVRN
        EDGKMRLEIDFPPLPSNISSYKGSSD+FIDANIQLALAVARNLQEKRG RSCIVFPDKPEKRRAS+LFKTA+DSIDGITVSSLDDVPAG VTSFFRSVRN
Subjt:  EDGKMRLEIDFPPLPSNISSYKGSSDDFIDANIQLALAVARNLQEKRGIRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRSVRN

Query:  TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPALLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAP
        TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIP LLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAP
Subjt:  TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPALLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAP

Query:  YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
        YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
Subjt:  YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

A0A6J1GQW6 protein LOW PSII ACCUMULATION 3, chloroplastic

3.2e-207

93.09

Show/hide

Query:  MAIMAFLSSPPHIPSLSPPFHTNFLFSPISSS---LRRSTRSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA
        MAIMAFLSSPPHIPSL  PFH+NFLFSPI+SS   LRRSTRSSLFGAQTLA SGFCFRIHC DKERAAPVT+SSDPKAGVPIYKPKTYEVLVSDAANSLA
Subjt:  MAIMAFLSSPPHIPSLSPPFHTNFLFSPISSS---LRRSTRSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA

Query:  YALEDGKMRLEIDFPPLPSNISSYKGSSDDFIDANIQLALAVARNLQEKRGIRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRS
        YALEDGKMRLEIDFPPLPSNISSYKGSSD+FIDANIQLALAVARNLQEKRG RSCIVFPDKP+K RASQLFKTALDSIDGIT+SSLDDVPAG VTSFFRS
Subjt:  YALEDGKMRLEIDFPPLPSNISSYKGSSDDFIDANIQLALAVARNLQEKRGIRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRS

Query:  VRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPALLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA
        +RNTLDFDFED+NAGRWTSS+PPSLYIFINCSTREL +IEKYVETFASSIP L+FNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTV 
Subjt:  VRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPALLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA

Query:  VAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
        +APYIVNYSGALFRQYPGPWQVMLKQ+DNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEED DSEVSSAWRS
Subjt:  VAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

A0A6J1JTN7 protein LOW PSII ACCUMULATION 3, chloroplastic

1.9e-207

93.09

Show/hide

Query:  MAIMAFLSSPPHIPSLSPPFHTNFLFSPISSS---LRRSTRSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA
        MAIMAFLSSPPHIPSL  PFH+NFLFSPISSS   LRRSTRSSLFGAQTLA SGFCFRIHC DKERAAPVT+SSDPKAGVPIYKPKTYEVLVSDAANSLA
Subjt:  MAIMAFLSSPPHIPSLSPPFHTNFLFSPISSS---LRRSTRSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA

Query:  YALEDGKMRLEIDFPPLPSNISSYKGSSDDFIDANIQLALAVARNLQEKRGIRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRS
        YALEDGKMRLEIDFPPLPSNISSYKGSSD+FIDANIQLALAVARNLQEKRG RSCIVFPDKP+K RASQLFKTALDSIDGIT+SSLDD+PAG VTSFFRS
Subjt:  YALEDGKMRLEIDFPPLPSNISSYKGSSDDFIDANIQLALAVARNLQEKRGIRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRS

Query:  VRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPALLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA
        +RNTLDFDFED+NAGRWTSS+PPSLYIFINCSTREL +IEKYVETFASSIP L+FNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTV 
Subjt:  VRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPALLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA

Query:  VAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
        +APYIVNYSGALFRQYPGPWQVMLKQ+DNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEED DSEVSSAWRS
Subjt:  VAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

SwissProt top hits

e value

%identity

Alignment

Q8H0W0 Protein LPA3

2.4e-151

79.13

Show/hide

Query:  TQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNISSYKGSSDDFIDANIQLALAVARNLQEKRGIRSCIVFPDKPEKRRASQL
        + +SDP+ GVP+YKPK+YEVL +DAANSLA+AL+D K RLEIDFPPLPS+ISSYKGSSDDFIDANIQLA+ V R LQEK   R+CIVFPDKPEKRRASQ 
Subjt:  TQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNISSYKGSSDDFIDANIQLALAVARNLQEKRGIRSCIVFPDKPEKRRASQL

Query:  FKTALDSIDGITVSSLDDVPAGAVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPALLFNLELETLRADLGLLG
        FK A DS+DGI++ SLDD+P  +VT+FFRS+R+TLDFDFED+N G W   +PP+LYIFINCSTREL  IEK+VETFASS PALLFNLEL+TLRADLGLLG
Subjt:  FKTALDSIDGITVSSLDDVPAGAVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPALLFNLELETLRADLGLLG

Query:  FPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRG
        FPPKDLHYRFLSQFIPVFYIR REYSKTVAVAP+++NY+GALFRQYPGPWQVMLKQ+D S+ACVAES TRFTLGETK+ELL+VLGLQEE+GSSLEFLRRG
Subjt:  FPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRG

Query:  YKAATWWEEDVDSEVSSAWRS
        YK+ATWWEEDV+ E SS WR+
Subjt:  YKAATWWEEDVDSEVSSAWRS

Arabidopsis top hits

e value

%identity

Alignment

AT1G73060.1 Low PSII Accumulation 3

1.7e-152

79.13

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Query:  TQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNISSYKGSSDDFIDANIQLALAVARNLQEKRGIRSCIVFPDKPEKRRASQL
        + +SDP+ GVP+YKPK+YEVL +DAANSLA+AL+D K RLEIDFPPLPS+ISSYKGSSDDFIDANIQLA+ V R LQEK   R+CIVFPDKPEKRRASQ 
Subjt:  TQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNISSYKGSSDDFIDANIQLALAVARNLQEKRGIRSCIVFPDKPEKRRASQL

Query:  FKTALDSIDGITVSSLDDVPAGAVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPALLFNLELETLRADLGLLG
        FK A DS+DGI++ SLDD+P  +VT+FFRS+R+TLDFDFED+N G W   +PP+LYIFINCSTREL  IEK+VETFASS PALLFNLEL+TLRADLGLLG
Subjt:  FKTALDSIDGITVSSLDDVPAGAVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPALLFNLELETLRADLGLLG

Query:  FPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRG
        FPPKDLHYRFLSQFIPVFYIR REYSKTVAVAP+++NY+GALFRQYPGPWQVMLKQ+D S+ACVAES TRFTLGETK+ELL+VLGLQEE+GSSLEFLRRG
Subjt:  FPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRG

Query:  YKAATWWEEDVDSEVSSAWRS
        YK+ATWWEEDV+ E SS WR+
Subjt:  YKAATWWEEDVDSEVSSAWRS

AT5G48790.1 Domain of unknown function (DUF1995)

4.9e-11

26.33

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Query:  PKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNISSYKGSSDDFIDANIQLALA---VARNLQEKRGIRSCIVFPDKPEKRRASQ-LFKTALDSIDG
        P+ Y  L++ A  ++  AL+D K  +EI+FP   S ++S  G  +   +    + +      R L  ++   + I FP+  E + A + +F      +D 
Subjt:  PKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNISSYKGSSDDFIDANIQLALA---VARNLQEKRGIRSCIVFPDKPEKRRASQ-LFKTALDSIDG

Query:  ITVSSLDDVPAGAVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEK-YVETFASSIPAL-LFNLELETLRADLGLLGFPPKDLHY
        +T  SL +        FF  V+           A R    D   L  +   +  E+ ++E+ Y E   ++   L +FN EL+ +R+     G+ PK    
Subjt:  ITVSSLDDVPAGAVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEK-YVETFASSIPAL-LFNLELETLRADLGLLGFPPKDLHY

Query:  RFLSQFIPVFYIRIREYSKT----VAVAPYIVNY----SGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELL
                 FY ++   +KT    +    YI N+     G LFR YPGPWQV L+++ N Y CV + E+  +L E   ++L
Subjt:  RFLSQFIPVFYIRIREYSKT----VAVAPYIVNY----SGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELL

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCGATCATGGCGTTTCTCTCTTCACCACCCCACATTCCCTCTCTTTCTCCACCGTTTCACACCAACTTTCTCTTCTCTCCCATTTCCTCGTCCTTACGGCGTTCTAC
TCGATCCAGTTTATTTGGCGCTCAAACCTTGGCGGCTTCCGGATTTTGCTTTAGAATACACTGTCGTGACAAAGAACGAGCTGCACCGGTTACTCAGAGCTCCGATCCTA
AGGCTGGAGTTCCCATTTATAAGCCCAAAACGTACGAGGTGTTAGTCTCCGATGCTGCTAACTCTCTTGCTTATGCTCTGGAAGATGGAAAGATGCGCTTGGAGATTGAT
TTCCCACCCCTGCCTAGCAACATTTCTTCGTATAAGGGATCTTCAGATGATTTCATTGATGCAAATATTCAACTGGCCCTGGCTGTTGCAAGAAATCTTCAAGAAAAGAG
AGGAATTAGATCTTGCATTGTGTTTCCAGATAAGCCAGAGAAGCGTAGAGCTTCACAGTTGTTCAAAACAGCTCTTGACTCGATCGATGGTATAACTGTAAGTTCCCTGG
ACGATGTTCCTGCTGGTGCTGTCACATCTTTCTTCAGATCTGTTAGAAACACCCTTGATTTTGATTTTGAAGACGACAATGCAGGTCGTTGGACATCTAGTGACCCTCCA
TCTTTGTATATATTCATTAATTGTAGCACGCGTGAACTTGGTTTGATAGAGAAGTATGTGGAAACTTTTGCTTCGTCAATCCCCGCCCTGTTGTTTAATCTAGAACTTGA
AACCTTGCGTGCGGACTTGGGCTTACTGGGATTTCCCCCCAAAGATTTGCATTATCGATTTCTCTCTCAGTTTATCCCAGTGTTCTACATTCGAATCAGAGAGTATTCTA
AGACAGTAGCAGTAGCACCTTATATTGTTAATTACAGTGGAGCGTTGTTTCGTCAATACCCCGGACCTTGGCAAGTGATGCTGAAACAATCTGATAATTCTTATGCCTGC
GTTGCAGAGAGTGAAACAAGGTTCACCCTTGGTGAAACCAAAGATGAACTACTGAGGGTCCTTGGACTACAGGAGGAGCAAGGAAGCTCACTAGAATTTCTCCGCAGGGG
CTACAAGGCTGCCACTTGGTGGGAAGAAGATGTTGATTCTGAAGTATCTTCTGCATGGCGTAGTTGA

mRNA sequence

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ATTCCAAGAAGTTAAAGGGGCTAATGCGAATATTCAAGAAGATAGAGGACCCGCGGGAAAATCATAAAGTGGTGTCTTCAAGTTCGTTATCGTCTCATCCAAACGACCGG
CTCTCTTTTTCCCGGCGACTGAACTTCCACTCAGAACTTCAGAGAGCTTACCCATGGCGATCATGGCGTTTCTCTCTTCACCACCCCACATTCCCTCTCTTTCTCCACCG
TTTCACACCAACTTTCTCTTCTCTCCCATTTCCTCGTCCTTACGGCGTTCTACTCGATCCAGTTTATTTGGCGCTCAAACCTTGGCGGCTTCCGGATTTTGCTTTAGAAT
ACACTGTCGTGACAAAGAACGAGCTGCACCGGTTACTCAGAGCTCCGATCCTAAGGCTGGAGTTCCCATTTATAAGCCCAAAACGTACGAGGTGTTAGTCTCCGATGCTG
CTAACTCTCTTGCTTATGCTCTGGAAGATGGAAAGATGCGCTTGGAGATTGATTTCCCACCCCTGCCTAGCAACATTTCTTCGTATAAGGGATCTTCAGATGATTTCATT
GATGCAAATATTCAACTGGCCCTGGCTGTTGCAAGAAATCTTCAAGAAAAGAGAGGAATTAGATCTTGCATTGTGTTTCCAGATAAGCCAGAGAAGCGTAGAGCTTCACA
GTTGTTCAAAACAGCTCTTGACTCGATCGATGGTATAACTGTAAGTTCCCTGGACGATGTTCCTGCTGGTGCTGTCACATCTTTCTTCAGATCTGTTAGAAACACCCTTG
ATTTTGATTTTGAAGACGACAATGCAGGTCGTTGGACATCTAGTGACCCTCCATCTTTGTATATATTCATTAATTGTAGCACGCGTGAACTTGGTTTGATAGAGAAGTAT
GTGGAAACTTTTGCTTCGTCAATCCCCGCCCTGTTGTTTAATCTAGAACTTGAAACCTTGCGTGCGGACTTGGGCTTACTGGGATTTCCCCCCAAAGATTTGCATTATCG
ATTTCTCTCTCAGTTTATCCCAGTGTTCTACATTCGAATCAGAGAGTATTCTAAGACAGTAGCAGTAGCACCTTATATTGTTAATTACAGTGGAGCGTTGTTTCGTCAAT
ACCCCGGACCTTGGCAAGTGATGCTGAAACAATCTGATAATTCTTATGCCTGCGTTGCAGAGAGTGAAACAAGGTTCACCCTTGGTGAAACCAAAGATGAACTACTGAGG
GTCCTTGGACTACAGGAGGAGCAAGGAAGCTCACTAGAATTTCTCCGCAGGGGCTACAAGGCTGCCACTTGGTGGGAAGAAGATGTTGATTCTGAAGTATCTTCTGCATG
GCGTAGTTGAGCGGTTCGAGTGTCTCAACTATTTCCTCACATTTTCATGGACACAACATCGACGATATTGGACTCCTAGTTCAAACGGATGGCTTCTTTCTTAAAGACTC
TCGTGGCTCTCTTTGAACAGTTACTGCAGGCAAATTGTATCAGCTCTTTCAACCCACCAACCTCAGAAGATTGACACAAACTTGAATCCAACTCATTCACCTCTGGAGTT
CAAGGTGAAGTGGTCTGTACATTTTATAAGTCGCCATAAATTACAATGTGTTGTTCATCCTCGATACCGTGTTTCGTTTTCCTTTTTCACTCATGTTCCTTCAAAAAGTA
TAAATCAGGCATCTCATATGATTTGATCATTGTCTAGAATGAAGTTCAACTATTTCCATGCATTATGTGGTTCATAGATTCACTGCTTGCACCCTTTGATTAATCCTCTT
TTGTAATATAAAAACGCGAGTTCCTCCTCCATTCGTTATTTAGGG

Protein sequence

Show/hide protein sequence

MAIMAFLSSPPHIPSLSPPFHTNFLFSPISSSLRRSTRSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEID
FPPLPSNISSYKGSSDDFIDANIQLALAVARNLQEKRGIRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRSVRNTLDFDFEDDNAGRWTSSDPP
SLYIFINCSTRELGLIEKYVETFASSIPALLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAPYIVNYSGALFRQYPGPWQVMLKQSDNSYAC
VAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

CSPI07G20100 (gene) of Cucumber (PI 183967) v1 genome