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CSPI07G20320 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G20320
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionserine-rich protein-related
Genome locationChr7:17669657..17669974
RNA-Seq ExpressionCSPI07G20320
SyntenyCSPI07G20320
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058731.1 uncharacterized protein E6C27_scaffold339G002010 [Cucumis melo var. makuwa]9.6e-4488.57Show/hide
Query:  MPNKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPPLPPPPPRGSQSKAAATTTDHHLLKAFLMQIVKPSSHDLQRRGNFQPKPSRFCSVVSASDP
        M NKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTP  P PPP GSQSKAA TTTDH+ LKAFLMQIVKPSSH LQRRGNFQPKPSRFC++VSA DP
Subjt:  MPNKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPPLPPPPPRGSQSKAAATTTDHHLLKAFLMQIVKPSSHDLQRRGNFQPKPSRFCSVVSASDP

Query:  RLAVS
        RLAVS
Subjt:  RLAVS

KAG6593379.1 hypothetical protein SDJN03_12855, partial [Cucurbita argyrosperma subsp. sororia]5.7e-2870.75Show/hide
Query:  MPNKTA-SSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPPLPPPPPRGSQSKAAATTTDHHLLKAFLMQIVKPSSHDLQRRGNFQPKPSRFCSVVSASD
        M NKTA SS RLCLCAPTTHPGSFRCSLHRR   +S+K PPLPPP   G+QSKA + T    L+KAFLMQ++KPSS DLQRR NFQPKPSRFC+  +ASD
Subjt:  MPNKTA-SSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPPLPPPPPRGSQSKAAATTTDHHLLKAFLMQIVKPSSHDLQRRGNFQPKPSRFCSVVSASD

Query:  PRLAVS
          LAVS
Subjt:  PRLAVS

KAG7025727.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]6.3e-2770.19Show/hide
Query:  MPNKTA-SSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPPLPPPPPRGSQSKAAATTTDHHLLKAFLMQIVKPSSHDLQRRGNFQPKPSRFCSVVSASD
        M NKTA SS RLCLCAPTTHPGSFRCSLHRR   +S+K PPLPPP   G+QSKA + T    L+KAFLMQ++KPSS DLQRR NFQPKPSRFC+  +ASD
Subjt:  MPNKTA-SSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPPLPPPPPRGSQSKAAATTTDHHLLKAFLMQIVKPSSHDLQRRGNFQPKPSRFCSVVSASD

Query:  PRLA
          LA
Subjt:  PRLA

KGN45240.1 hypothetical protein Csa_016736 [Cucumis sativus]9.0e-5096.19Show/hide
Query:  MPNKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPPLPPPPPRGSQSKAAATTTDHHLLKAFLMQIVKPSSHDLQRRGNFQPKPSRFCSVVSASDP
        MPNKTASSSRLCLCAPTTHPGSFRCSLHRR SNSSHKTPPLPPP PRGSQSKAAATTTDHHLLKAFLMQIVKPSSHDLQRRG+F+PKPSRFCSVVSASDP
Subjt:  MPNKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPPLPPPPPRGSQSKAAATTTDHHLLKAFLMQIVKPSSHDLQRRGNFQPKPSRFCSVVSASDP

Query:  RLAVS
        RLAVS
Subjt:  RLAVS

XP_008461151.1 PREDICTED: uncharacterized protein LOC103499822 [Cucumis melo]1.1e-4489.52Show/hide
Query:  MPNKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPPLPPPPPRGSQSKAAATTTDHHLLKAFLMQIVKPSSHDLQRRGNFQPKPSRFCSVVSASDP
        MPNKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTP  P PPP GSQSKAA TTTDH+ LKAFLMQIVKPSSH LQRRGNFQPKPSRFC++VSA DP
Subjt:  MPNKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPPLPPPPPRGSQSKAAATTTDHHLLKAFLMQIVKPSSHDLQRRGNFQPKPSRFCSVVSASDP

Query:  RLAVS
        RLAVS
Subjt:  RLAVS

TrEMBL top hitse value%identityAlignment
A0A0A0K698 Uncharacterized protein4.3e-5096.19Show/hide
Query:  MPNKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPPLPPPPPRGSQSKAAATTTDHHLLKAFLMQIVKPSSHDLQRRGNFQPKPSRFCSVVSASDP
        MPNKTASSSRLCLCAPTTHPGSFRCSLHRR SNSSHKTPPLPPP PRGSQSKAAATTTDHHLLKAFLMQIVKPSSHDLQRRG+F+PKPSRFCSVVSASDP
Subjt:  MPNKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPPLPPPPPRGSQSKAAATTTDHHLLKAFLMQIVKPSSHDLQRRGNFQPKPSRFCSVVSASDP

Query:  RLAVS
        RLAVS
Subjt:  RLAVS

A0A1S3CEH6 uncharacterized protein LOC1034998225.5e-4589.52Show/hide
Query:  MPNKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPPLPPPPPRGSQSKAAATTTDHHLLKAFLMQIVKPSSHDLQRRGNFQPKPSRFCSVVSASDP
        MPNKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTP  P PPP GSQSKAA TTTDH+ LKAFLMQIVKPSSH LQRRGNFQPKPSRFC++VSA DP
Subjt:  MPNKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPPLPPPPPRGSQSKAAATTTDHHLLKAFLMQIVKPSSHDLQRRGNFQPKPSRFCSVVSASDP

Query:  RLAVS
        RLAVS
Subjt:  RLAVS

A0A5A7UZ19 Uncharacterized protein4.6e-4488.57Show/hide
Query:  MPNKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPPLPPPPPRGSQSKAAATTTDHHLLKAFLMQIVKPSSHDLQRRGNFQPKPSRFCSVVSASDP
        M NKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTP  P PPP GSQSKAA TTTDH+ LKAFLMQIVKPSSH LQRRGNFQPKPSRFC++VSA DP
Subjt:  MPNKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPPLPPPPPRGSQSKAAATTTDHHLLKAFLMQIVKPSSHDLQRRGNFQPKPSRFCSVVSASDP

Query:  RLAVS
        RLAVS
Subjt:  RLAVS

A0A5N6RUY3 Uncharacterized protein4.4e-1851.55Show/hide
Query:  NKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPPLPPPPPRGSQSKAAATTTDHHLLKAFLMQIVKPSSHDLQRRGNFQPKPSRFCSVVSASD
        +++ ++SR CLCAPTTHPGSFRCS+HR P          P  P  G   +  A     +  +AFL+Q++KPSSHDLQRR NFQPKPSRFC + S +D
Subjt:  NKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPPLPPPPPRGSQSKAAATTTDHHLLKAFLMQIVKPSSHDLQRRGNFQPKPSRFCSVVSASD

A0A6J1DD51 uncharacterized protein LOC1110193811.7e-2262.5Show/hide
Query:  TASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPPLPPPPPRGSQSKAAATTTDHH---LLKAFLMQIVKPSSHDLQRRGNFQPKPSRFCSVVSASDPR
        +AS+SRLCLCAPTTHPGSFRCSLHRRP  +S K           S++ AA+   D +   L+KAFLMQI+KPSSHDLQRR NFQPKPSRFC+V S     
Subjt:  TASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPPLPPPPPRGSQSKAAATTTDHH---LLKAFLMQIVKPSSHDLQRRGNFQPKPSRFCSVVSASDPR

Query:  LAVS
        LAVS
Subjt:  LAVS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G24577.1 unknown protein1.1e-0547.37Show/hide
Query:  MPNKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKT
        +  +T+ +  +C+C+PTTHPGSF+C LHR PS   +K+
Subjt:  MPNKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKT

AT5G11090.1 serine-rich protein-related1.8e-1135.58Show/hide
Query:  PNKTASSSRLCLCAPTTHPGSFRCSLHRRPSN------SSHKTPPLPPPPPRGSQSKAAATTTDHHLLKAFLMQIVKPSSHDLQRRGNFQPKPSRFCSVV
        P+     SR C+C+PTTHPGSFRCSLH+  +N      +S+ T  L       + S       +   ++  L  +++PSSH L+RR  +QP+PSR   + 
Subjt:  PNKTASSSRLCLCAPTTHPGSFRCSLHRRPSN------SSHKTPPLPPPPPRGSQSKAAATTTDHHLLKAFLMQIVKPSSHDLQRRGNFQPKPSRFCSVV

Query:  SASD
         A +
Subjt:  SASD

AT5G20370.1 serine-rich protein-related1.7e-0633.65Show/hide
Query:  SSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPPLPPPPPRGSQSKAAATTTDHHLLKAFLM--------------------QIVKPSSHDLQRRGNFQPK
        + R CLC+PTTHPGSFRCS HRR  +   KT                      +L K  LM                     + KPSS    RR  F+P+
Subjt:  SSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPPLPPPPPRGSQSKAAATTTDHHLLKAFLM--------------------QIVKPSSHDLQRRGNFQPK

Query:  PSRF
         SRF
Subjt:  PSRF

AT5G25280.1 serine-rich protein-related3.0e-1135.92Show/hide
Query:  NKTASSSRLCLCAPTTHPGSFRCSLHRRPSN------SSHKTPPLPPPPPRGSQSKAAATTTDHHLLKAFLMQIVKPSSHDLQRRGNFQPKPSRFCSVVS
        +K   S R C+C+PTTHPGSFRCSLH+  +N      +S+ T  L       + S       +   ++  L  +++PSSH L+RR  ++P+ SR  S+  
Subjt:  NKTASSSRLCLCAPTTHPGSFRCSLHRRPSN------SSHKTPPLPPPPPRGSQSKAAATTTDHHLLKAFLMQIVKPSSHDLQRRGNFQPKPSRFCSVVS

Query:  ASD
        A D
Subjt:  ASD

AT5G25280.2 serine-rich protein-related3.0e-1135.92Show/hide
Query:  NKTASSSRLCLCAPTTHPGSFRCSLHRRPSN------SSHKTPPLPPPPPRGSQSKAAATTTDHHLLKAFLMQIVKPSSHDLQRRGNFQPKPSRFCSVVS
        +K   S R C+C+PTTHPGSFRCSLH+  +N      +S+ T  L       + S       +   ++  L  +++PSSH L+RR  ++P+ SR  S+  
Subjt:  NKTASSSRLCLCAPTTHPGSFRCSLHRRPSN------SSHKTPPLPPPPPRGSQSKAAATTTDHHLLKAFLMQIVKPSSHDLQRRGNFQPKPSRFCSVVS

Query:  ASD
        A D
Subjt:  ASD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGAACAAAACCGCTTCCTCTTCCCGCCTCTGCCTCTGTGCTCCCACCACCCATCCCGGCTCTTTCCGCTGCAGCCTCCACCGTCGTCCTTCGAATTCCTCCCACAA
AACCCCGCCGCTGCCGCCTCCTCCTCCGCGTGGAAGCCAGTCGAAGGCGGCAGCGACGACGACGGATCATCATTTGCTTAAGGCGTTTCTGATGCAGATCGTAAAGCCGT
CGAGTCATGATCTTCAAAGACGGGGAAATTTCCAGCCTAAACCTTCTCGATTCTGCAGTGTCGTCTCTGCTTCGGATCCTCGTTTGGCTGTTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCGAACAAAACCGCTTCCTCTTCCCGCCTCTGCCTCTGTGCTCCCACCACCCATCCCGGCTCTTTCCGCTGCAGCCTCCACCGTCGTCCTTCGAATTCCTCCCACAA
AACCCCGCCGCTGCCGCCTCCTCCTCCGCGTGGAAGCCAGTCGAAGGCGGCAGCGACGACGACGGATCATCATTTGCTTAAGGCGTTTCTGATGCAGATCGTAAAGCCGT
CGAGTCATGATCTTCAAAGACGGGGAAATTTCCAGCCTAAACCTTCTCGATTCTGCAGTGTCGTCTCTGCTTCGGATCCTCGTTTGGCTGTTTCTTGA
Protein sequenceShow/hide protein sequence
MPNKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPPLPPPPPRGSQSKAAATTTDHHLLKAFLMQIVKPSSHDLQRRGNFQPKPSRFCSVVSASDPRLAVS