; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI07G20820 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G20820
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionlate embryogenesis abundant protein 1
Genome locationChr7:17911006..17911768
RNA-Seq ExpressionCSPI07G20820
SyntenyCSPI07G20820
Gene Ontology termsNA
InterPro domainsIPR039624 - Stress-induced protein KIN1/KIN2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058773.1 late embryogenesis abundant protein 1 [Cucumis melo var. makuwa]6.7e-3376.23Show/hide
Query:  MASHQD-LSHKADEIVGQAQVKRDEMMNQPTTQDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNTNTNNPANNSANNPTN
        MASHQD LSHKA E VGQAQVK+DEMMNQPT  DQ SA QTA+DLKDQAA+FLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSN N            +N
Subjt:  MASHQD-LSHKADEIVGQAQVKRDEMMNQPTTQDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNTNTNNPANNSANNPTN

Query:  NPANNPTSNPTSNPTSNPSTRI
        NP NNPT+NP++NPT+NPSTRI
Subjt:  NPANNPTSNPTSNPTSNPSTRI

XP_004136082.1 late embryogenesis abundant protein 2 [Cucumis sativus]5.5e-5199.17Show/hide
Query:  MASHQDLSHKADEIVGQAQVKRDEMMNQPTTQDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNTNTNNPANNSANNPTNN
        MASHQDLSHKADEIVGQAQVKRDEMMNQPTTQDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNTNT+NPANNSANNPTNN
Subjt:  MASHQDLSHKADEIVGQAQVKRDEMMNQPTTQDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNTNTNNPANNSANNPTNN

Query:  PANNPTSNPTSNPTSNPSTRI
        PANNPTSNPTSNPTSNPSTRI
Subjt:  PANNPTSNPTSNPTSNPSTRI

XP_008461082.1 PREDICTED: late embryogenesis abundant protein 1 [Cucumis melo]1.3e-3681.15Show/hide
Query:  MASHQD-LSHKADEIVGQAQVKRDEMMNQPTTQDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNTNTNNPANNSANNPTN
        MASHQD LSHKA E VGQAQVK+DEMMNQPT  DQ SA QTA+DLKDQAA+FLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSN N+NNP     NNPT 
Subjt:  MASHQD-LSHKADEIVGQAQVKRDEMMNQPTTQDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNTNTNNPANNSANNPTN

Query:  NPANNPTSNPTSNPTSNPSTRI
        NP+NNPT+NP++NPT+NPSTRI
Subjt:  NPANNPTSNPTSNPTSNPSTRI

XP_023000409.1 late embryogenesis abundant protein 1 [Cucurbita maxima]1.3e-2366.67Show/hide
Query:  MASHQDLSHKADEIVGQAQVKRDEMMNQ------------PTTQDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNTNTNN
        MAS QD+SH   E+VGQAQVK+DE+MNQ             TT DQSSAAQTA+DLKDQAA+FLQQTGEQVKNMAQGAAEAVKNTLGMNTD++SN   N 
Subjt:  MASHQDLSHKADEIVGQAQVKRDEMMNQ------------PTTQDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNTNTNN

Query:  PANNSANNPTNNPA
              NNPTN P+
Subjt:  PANNSANNPTNNPA

XP_038899752.1 late embryogenesis abundant protein 2-like [Benincasa hispida]8.8e-2566.95Show/hide
Query:  MASHQDLSHKADEIVGQAQVKRDEMMNQ-----------PTTQDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNTNTNNP
        MASHQD+SHKA EIVGQAQVK+DE++NQ            +T DQ S AQTA++LKDQAA+FLQQTGEQVKNMAQGAA+AVKNTLGMNTDNT NT     
Subjt:  MASHQDLSHKADEIVGQAQVKRDEMMNQ-----------PTTQDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNTNTNNP

Query:  ANNSANNPTNNPANNPTS
             NNPTNNP NNP++
Subjt:  ANNSANNPTNNPANNPTS

TrEMBL top hitse value%identityAlignment
A0A0A0K8V2 Uncharacterized protein2.6e-5199.17Show/hide
Query:  MASHQDLSHKADEIVGQAQVKRDEMMNQPTTQDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNTNTNNPANNSANNPTNN
        MASHQDLSHKADEIVGQAQVKRDEMMNQPTTQDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNTNT+NPANNSANNPTNN
Subjt:  MASHQDLSHKADEIVGQAQVKRDEMMNQPTTQDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNTNTNNPANNSANNPTNN

Query:  PANNPTSNPTSNPTSNPSTRI
        PANNPTSNPTSNPTSNPSTRI
Subjt:  PANNPTSNPTSNPTSNPSTRI

A0A1S3CF46 late embryogenesis abundant protein 16.3e-3781.15Show/hide
Query:  MASHQD-LSHKADEIVGQAQVKRDEMMNQPTTQDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNTNTNNPANNSANNPTN
        MASHQD LSHKA E VGQAQVK+DEMMNQPT  DQ SA QTA+DLKDQAA+FLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSN N+NNP     NNPT 
Subjt:  MASHQD-LSHKADEIVGQAQVKRDEMMNQPTTQDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNTNTNNPANNSANNPTN

Query:  NPANNPTSNPTSNPTSNPSTRI
        NP+NNPT+NP++NPT+NPSTRI
Subjt:  NPANNPTSNPTSNPTSNPSTRI

A0A5D3CF20 Late embryogenesis abundant protein 13.3e-3376.23Show/hide
Query:  MASHQD-LSHKADEIVGQAQVKRDEMMNQPTTQDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNTNTNNPANNSANNPTN
        MASHQD LSHKA E VGQAQVK+DEMMNQPT  DQ SA QTA+DLKDQAA+FLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSN N            +N
Subjt:  MASHQD-LSHKADEIVGQAQVKRDEMMNQPTTQDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNTNTNNPANNSANNPTN

Query:  NPANNPTSNPTSNPTSNPSTRI
        NP NNPT+NP++NPT+NPSTRI
Subjt:  NPANNPTSNPTSNPTSNPSTRI

A0A6J1GQ03 late embryogenesis abundant protein 1-like3.1e-2373.15Show/hide
Query:  MASHQDLSHKADEIVGQAQVKRDEMMNQPT-TQDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNTNTNNPANNSANNPTN
        MAS QDLS KA E VGQAQVK+DE+M+Q T TQD  SAAQTATDLKDQAASFLQQTGEQVK+MAQGAAEAVKNTLGM TD  + T+ N       NNPTN
Subjt:  MASHQDLSHKADEIVGQAQVKRDEMMNQPT-TQDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNTNTNNPANNSANNPTN

Query:  NPANNPTS
        NP  +PTS
Subjt:  NPANNPTS

A0A6J1KJU5 late embryogenesis abundant protein 16.1e-2466.67Show/hide
Query:  MASHQDLSHKADEIVGQAQVKRDEMMNQ------------PTTQDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNTNTNN
        MAS QD+SH   E+VGQAQVK+DE+MNQ             TT DQSSAAQTA+DLKDQAA+FLQQTGEQVKNMAQGAAEAVKNTLGMNTD++SN   N 
Subjt:  MASHQDLSHKADEIVGQAQVKRDEMMNQ------------PTTQDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNTNTNN

Query:  PANNSANNPTNNPA
              NNPTN P+
Subjt:  PANNSANNPTNNPA

SwissProt top hitse value%identityAlignment
O49816 Late embryogenesis abundant protein 19.5e-0647.89Show/hide
Query:  KADEIVGQAQVKRDEMMNQPTTQDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQGAAEAVKNTLGMNTDN
        KA +  G+A+ K  EM          S  +TA   KD +A FLQQTGE+VK MAQGA +AVK T GM  D+
Subjt:  KADEIVGQAQVKRDEMMNQPTTQDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQGAAEAVKNTLGMNTDN

O49817 Late embryogenesis abundant protein 21.2e-0544.74Show/hide
Query:  QDLSHKADEIVGQAQVKRDEMMNQPTTQDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQGAAEAVKNTLGMNTDN
        Q    KA +  G+A+ K  EM          S  +TA   KD +A FLQQTGE+ K MAQGA +AVK T GM  D+
Subjt:  QDLSHKADEIVGQAQVKRDEMMNQPTTQDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQGAAEAVKNTLGMNTDN

Arabidopsis top hitse value%identityAlignment
AT1G15415.1 The protein encoded by this gene was identified as a part of pollen proteome by mass spec analysis. It has weak homology to LEA (late embryo abundant) proteins. Encodes protein phosphatase 2A (PP2A) B'gamma subunit. Targeted to nucleus and cytosol.3.3e-0641.35Show/hide
Query:  MASHQD--LSHKADEIVGQAQVKRDEMMNQPTTQDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNTNTNNPANNSANNPT
        MAS QD   S +A +IVGQA VK ++  N                   QA+ FLQQ GE+VK+MA  A+EAVKN LG+N DN       NP +    N T
Subjt:  MASHQD--LSHKADEIVGQAQVKRDEMMNQPTTQDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNTNTNNPANNSANNPT

Query:  NNPA
         +P+
Subjt:  NNPA

AT1G52680.1 late embryogenesis abundant protein-related / LEA protein-related5.5e-0941.03Show/hide
Query:  MASHQDLSHKADEIVGQAQVKRDEMMNQPT--------------TQDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNTNT
        M+S Q LSH A E+ GQ Q+K++E +N  +              +Q  S   Q    L  QA+S +QQTG QVKNMAQGAA+AVKNTLGM      +  T
Subjt:  MASHQDLSHKADEIVGQAQVKRDEMMNQPT--------------TQDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNTNT

Query:  NNPANNSANNPTNNPAN
        N+P++ +    +N P +
Subjt:  NNPANNSANNPTNNPAN

AT4G13560.1 Late embryogenesis abundant protein (LEA) family protein4.8e-0545.21Show/hide
Query:  DLSHKA-DEIVGQAQVKRDEMMNQPTTQDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQGAAEAVKNTLGMN
        DL+  A D+     Q  RD+     T     SA ++A   ++QAA    QTGE VKNMAQGA + VKN+LGMN
Subjt:  DLSHKA-DEIVGQAQVKRDEMMNQPTTQDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQGAAEAVKNTLGMN

AT5G38760.1 Late embryogenesis abundant protein (LEA) family protein1.4e-0439.47Show/hide
Query:  ASHQDLSHKADEIVGQAQVKRDEMMNQPTTQDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQGAAEAVKNTLGMN
        ++ Q++S +A +  GQ Q K   MM++      S+AAQ+A +        L++TG+Q+K  AQGA E+VKN  GMN
Subjt:  ASHQDLSHKADEIVGQAQVKRDEMMNQPTTQDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQGAAEAVKNTLGMN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGCCATCAGGATCTTAGCCACAAGGCTGATGAGATTGTTGGCCAAGCTCAGGTTAAGAGAGATGAGATGATGAACCAACCCACTACTCAGGACCAATCATCTGC
TGCCCAAACTGCGACTGACCTCAAGGATCAAGCCGCAAGTTTCCTTCAACAGACTGGAGAGCAAGTGAAGAACATGGCACAAGGAGCCGCTGAGGCAGTGAAGAACACAC
TTGGGATGAACACTGATAACACTTCAAACACCAACACCAACAATCCAGCCAACAATTCAGCCAACAATCCTACCAACAATCCAGCCAACAACCCTACCAGCAATCCAACC
AGCAATCCTACCAGCAATCCATCCACTAGAATTTAA
mRNA sequenceShow/hide mRNA sequence
ATTGCATCACTTAAGTTTTTCATATTTCATTATTTAATTTTCTTCTTTCAGTTTTAAAAAACAAAAAATACTATTCAGAAAATGGCAAGCCATCAGGATCTTAGCCACAA
GGCTGATGAGATTGTTGGCCAAGCTCAGGTTAAGAGAGATGAGATGATGAACCAACCCACTACTCAGGACCAATCATCTGCTGCCCAAACTGCGACTGACCTCAAGGATC
AAGCCGCAAGTTTCCTTCAACAGACTGGAGAGCAAGTGAAGAACATGGCACAAGGAGCCGCTGAGGCAGTGAAGAACACACTTGGGATGAACACTGATAACACTTCAAAC
ACCAACACCAACAATCCAGCCAACAATTCAGCCAACAATCCTACCAACAATCCAGCCAACAACCCTACCAGCAATCCAACCAGCAATCCTACCAGCAATCCATCCACTAG
AATTTAAAAACATGATGAAGCATTAACTTACTTCATTTTTTTCTTTTTGGTTTTATTTTTTTAAATGAAAATTGCTTTTTTTTCATTATGAGCAAATGAAAAGGGTGATC
AACTTAATGTTTTATGTATAAATAAATTGAAAGGAAGAGTGTGATGTATGGATCCCCTTCCTTTTCATTAATTAAATTTAATTTCTAGTCTTTTTGCTCTTTCTCTCATG
TGTCCCTTGATAGTTCT
Protein sequenceShow/hide protein sequence
MASHQDLSHKADEIVGQAQVKRDEMMNQPTTQDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNTNTNNPANNSANNPTNNPANNPTSNPT
SNPTSNPSTRI