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CSPI07G20870 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G20870
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description39S ribosomal protein L41-A, mitochondrial-like
Genome locationChr7:17927141..17930035
RNA-Seq ExpressionCSPI07G20870
SyntenyCSPI07G20870
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR019189 - Ribosomal protein L27/L41, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004135839.1 39S ribosomal protein L41-A, mitochondrial [Cucumis sativus]7.7e-45100Show/hide
Query:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELKTSDNNESAKS
        MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELKTSDNNESAKS
Subjt:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELKTSDNNESAKS

XP_008461075.1 PREDICTED: 39S ribosomal protein L41-A, mitochondrial-like [Cucumis melo]1.5e-4397.85Show/hide
Query:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELKTSDNNESAKS
        MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIEL TSDN ESAKS
Subjt:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELKTSDNNESAKS

XP_022143129.1 39S ribosomal protein L41-A, mitochondrial [Momordica charantia]5.2e-4191.4Show/hide
Query:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELKTSDNNESAKS
        MALGLILGLGR MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNY+VPDL+DFKLKPYVSQCP E+KTS+ +ESAKS
Subjt:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELKTSDNNESAKS

XP_022982189.1 39S ribosomal protein L41-A, mitochondrial-like [Cucurbita maxima]5.7e-4091.4Show/hide
Query:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELKTSDNNESAKS
        MALGLILGL R MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDL+DFKLKPYVSQCPIE KTS+  ES KS
Subjt:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELKTSDNNESAKS

XP_038897038.1 39S ribosomal protein L41-A, mitochondrial-like [Benincasa hispida]1.1e-4396.77Show/hide
Query:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELKTSDNNESAKS
        MALGLILGLGR MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDL+DFKLKPYVSQCPIE+KTSDNNESAKS
Subjt:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELKTSDNNESAKS

TrEMBL top hitse value%identityAlignment
A0A0A0KBX4 Uncharacterized protein3.7e-45100Show/hide
Query:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELKTSDNNESAKS
        MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELKTSDNNESAKS
Subjt:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELKTSDNNESAKS

A0A1S3CEC5 39S ribosomal protein L41-A, mitochondrial-like7.0e-4497.85Show/hide
Query:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELKTSDNNESAKS
        MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIEL TSDN ESAKS
Subjt:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELKTSDNNESAKS

A0A2C9U139 Uncharacterized protein1.4e-3986.96Show/hide
Query:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELKTSDNNESAK
        M LGLILG+GR MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYV+VPEKLPNYVVPDL+DFKLKPYVSQCP E+KT++++E+AK
Subjt:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELKTSDNNESAK

A0A6J1CNE9 39S ribosomal protein L41-A, mitochondrial2.5e-4191.4Show/hide
Query:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELKTSDNNESAKS
        MALGLILGLGR MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNY+VPDL+DFKLKPYVSQCP E+KTS+ +ESAKS
Subjt:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELKTSDNNESAKS

A0A6J1J3V5 39S ribosomal protein L41-A, mitochondrial-like2.8e-4091.4Show/hide
Query:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELKTSDNNESAKS
        MALGLILGL R MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDL+DFKLKPYVSQCPIE KTS+  ES KS
Subjt:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELKTSDNNESAKS

SwissProt top hitse value%identityAlignment
Q5BJX1 39S ribosomal protein L41, mitochondrial1.3e-0750Show/hide
Query:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVS
        +SKR PR + K +  K TGF+T +  +V + E +P +VVPDL+ FKLKPYV+
Subjt:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVS

Q6DJI4 39S ribosomal protein L41-A, mitochondrial7.8e-0843.24Show/hide
Query:  LGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVS
        +GLI  + R + R      +  +SK+ P  Y KG+  K  G+ T  G +V V E +P +VVPDL+ FKLKPYVS
Subjt:  LGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVS

Q6INF3 39S ribosomal protein L41-B, mitochondrial1.3e-0743.24Show/hide
Query:  LGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVS
        +GLI  + R + R      +  +SK  P  Y KG+  K  G+ T  G +V V E +P +VVPDL+ FKLKPYVS
Subjt:  LGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVS

Q8IXM3 39S ribosomal protein L41, mitochondrial1.9e-0650Show/hide
Query:  SSKRAPRDY--YKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVS
        +SKR PR +   KG+  K  GF T    +V + E +P +VVPDL+ FKLKPYVS
Subjt:  SSKRAPRDY--YKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVS

Q9CQN7 39S ribosomal protein L41, mitochondrial1.3e-0748.08Show/hide
Query:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVS
        +SKR PR + K +  K TG +T    +V + E +P +VVPDL+ FKLKPYV+
Subjt:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVS

Arabidopsis top hitse value%identityAlignment
AT4G09012.1 Mitochondrial ribosomal protein L272.2e-3473.12Show/hide
Query:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIEL-KTSDNNESAK
        M LGL+ G+GR  RRKR SSLDILS KRAPRD+YKGKNCKP GFHTRK GYVV P+KLPNYVVPDL+ FKLKPYVSQCP+++ KT+++ E++K
Subjt:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIEL-KTSDNNESAK

AT5G39800.1 Mitochondrial ribosomal protein L272.2e-3776.4Show/hide
Query:  GLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELKTSDNNESAK
        GL++G+GR  RRKR+SSLDILS KRAPRD+YKGKNCKPTGFHTRKGGYVV P+KLPNYVVPDL+ FKLKPYVSQCPI++ T+++ E++K
Subjt:  GLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELKTSDNNESAK

AT5G40080.1 Mitochondrial ribosomal protein L274.8e-3775.28Show/hide
Query:  GLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELKTSDNNESAK
        GL++G+GR  RRKR SSLDILS KRAPRD+YKGKNCKPTGFHTRKGGYVV P+KLPNYVVPDL+ FKLKPYVSQCP+++ T+++ E++K
Subjt:  GLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELKTSDNNESAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTGGGACTAATATTGGGACTCGGAAGAGTAATGCGGAGAAAACGTACATCTTCTCTCGACATTCTTTCATCTAAACGAGCTCCACGAGATTACTACAAGGGCAA
GAATTGCAAGCCTACTGGTTTCCATACGCGCAAAGGTGGATATGTGGTGGTGCCAGAGAAACTGCCTAACTATGTCGTCCCTGATTTGTCTGATTTCAAGCTCAAACCTT
ATGTATCTCAATGCCCCATAGAACTTAAGACCAGTGACAACAATGAATCAGCTAAATCATAA
mRNA sequenceShow/hide mRNA sequence
CTTATACTTTCTTTTTTCGTCTCATTAGCTTTCGCTCTCTTTTTCTTATTCTCCGCTGCCGCCATCGGTTCACCTGTTCATCTCTTCCCTTCAGCGGGTTTAAATTCCAC
CGACGTGGGGTATTTCCGACCGCCGTCTGATAAATAACCTAGCCGAATAAATTTCCTTTAAAGGTTCTTGTATTCTTCTTTTGTTTGATTGAGGCGATAAACTTGAGAAA
TGGCGTTGGGACTAATATTGGGACTCGGAAGAGTAATGCGGAGAAAACGTACATCTTCTCTCGACATTCTTTCATCTAAACGAGCTCCACGAGATTACTACAAGGGCAAG
AATTGCAAGCCTACTGGTTTCCATACGCGCAAAGGTGGATATGTGGTGGTGCCAGAGAAACTGCCTAACTATGTCGTCCCTGATTTGTCTGATTTCAAGCTCAAACCTTA
TGTATCTCAATGCCCCATAGAACTTAAGACCAGTGACAACAATGAATCAGCTAAATCATAAGCAAAGAGCATACGCGAATGATGTTGGTGATGGCATCGAGGGGACTTGA
AGCAAAAGACCTAGGATTCTTTTACTAGTTGTTAGCAAGTTCAGGCTCCGTTTTGGTCTTGAGTTGAAAAACTTGTTTCAAAGAACAAATAACCGAGGAGAAAAACGGAA
ACAGAACTCTTACTTTCACTATATATGAAAACAAGTTGAATCCGAGATTTGAAGTTAAAATTTGGAAGCTGTGTTTGGTTTTGAATTTTTAAGTATTAAGGTTATCGTGC
TTTTTGCCTTGTTGGCGATTTGGTTTCAATGGAGGGAAATGATGCACTAAATTTATGCCAAAGAAAAGCATATATTATTAAGTTTTATTTTGTACTTGGATAAAATATAA
TTTGGCTTTTTAGTTTCAAAATTACTTGACTTACCTACTTACCTAAGATGAATGTTATGTGAGATTACTCGAGAATT
Protein sequenceShow/hide protein sequence
MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELKTSDNNESAKS