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CSPI07G21170 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G21170
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionthionin-like protein 2
Genome locationChr7:18133854..18134812
RNA-Seq ExpressionCSPI07G21170
SyntenyCSPI07G21170
Gene Ontology termsNA
InterPro domainsIPR038975 - Thionin-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN45341.1 hypothetical protein Csa_015540 [Cucumis sativus]2.4e-65100Show/hide
Query:  MESSNVMAIKCGLIVCLFLSSLSIAHSFFDDKTQVEICFKSCLNVCLYDKKSIRFLCPLKCTKICVADPWTKNFQALLTKKDSSCELDCATSKCTNSIST
        MESSNVMAIKCGLIVCLFLSSLSIAHSFFDDKTQVEICFKSCLNVCLYDKKSIRFLCPLKCTKICVADPWTKNFQALLTKKDSSCELDCATSKCTNSIST
Subjt:  MESSNVMAIKCGLIVCLFLSSLSIAHSFFDDKTQVEICFKSCLNVCLYDKKSIRFLCPLKCTKICVADPWTKNFQALLTKKDSSCELDCATSKCTNSIST

Query:  NDIIDEKEMGKCVDSCTQKCSNNEN
        NDIIDEKEMGKCVDSCTQKCSNNEN
Subjt:  NDIIDEKEMGKCVDSCTQKCSNNEN

XP_008461040.1 PREDICTED: thionin-like protein 2 [Cucumis melo]3.2e-3061.98Show/hide
Query:  MESSNVMAIKCGLIVCLFLSSLSIAHSFFDDKTQVEICFKSCLNVCLYDKKSIRFLCPLKCTKICVADPWTKNFQALLTKKDSSCELDCATSKCTNSIST
        MESSNVMA+KCGLIV LFLSSLSIA SF D+ T +  CFKSCL  C+ +KK+ R LCP KCTKICVADP T +F+ +     SSCEL CA S C    ST
Subjt:  MESSNVMAIKCGLIVCLFLSSLSIAHSFFDDKTQVEICFKSCLNVCLYDKKSIRFLCPLKCTKICVADPWTKNFQALLTKKDSSCELDCATSKCTNSIST

Query:  NDIIDEKEMGKCVDSCTQKCS
         +  DEKE+ KCV SC Q CS
Subjt:  NDIIDEKEMGKCVDSCTQKCS

XP_011659556.1 thionin-like protein 2 [Cucumis sativus]3.8e-0733.33Show/hide
Query:  NVMAIKCGLIVCLFLSSLSIAHSFFDDKTQVEICFKSCLNVCLYDKKSIRFLCPLKCTKICVADPWTKNFQALLTKKDSS----CELDCATSKCTNSIST
        NV+A K  L+  L L+SLS A+S     T  + C+ +C  +C          CPL+C + C+   +  +   ++ ++       C+L CA S CT   ST
Subjt:  NVMAIKCGLIVCLFLSSLSIAHSFFDDKTQVEICFKSCLNVCLYDKKSIRFLCPLKCTKICVADPWTKNFQALLTKKDSS----CELDCATSKCTNSIST

Query:  NDIIDEKEMGKCVDSCTQKCSNN
             E+++G+CVDSC+Q CS N
Subjt:  NDIIDEKEMGKCVDSCTQKCSNN

XP_038896425.1 thionin-like protein 2 [Benincasa hispida]1.3e-1041.27Show/hide
Query:  MESSNVMAIKCGLIVCLFLSSLSIAHSFFDDKTQVEICFKSCLNVCLYDKKSIRFLCPLKCTKICVADPWTKN---FQALLTKKDSSCELDCATSKCTNS
        MESS  MA+K  L+ CL LSSLSIA+S   +    + C+ SC  VC        F CPL+C   C+A P   N    Q         C+L CATS CT  
Subjt:  MESSNVMAIKCGLIVCLFLSSLSIAHSFFDDKTQVEICFKSCLNVCLYDKKSIRFLCPLKCTKICVADPWTKN---FQALLTKKDSSCELDCATSKCTNS

Query:  ISTNDIIDEKEMGKCVDSCTQKCSNN
          T +    +E+  CVDSC Q CS N
Subjt:  ISTNDIIDEKEMGKCVDSCTQKCSNN

XP_038899383.1 thionin-like protein 2 [Benincasa hispida]2.9e-0738.46Show/hide
Query:  MAIKCGLIVCLFLSSLSIAHSFFDDKTQVEICFKSCLNVCLYDKKSIRFLCPLKCTKICV--ADPWTKNFQALLTKKDSSCELDCATSKCTNSISTNDII
        MA K  LI  L LSSLS A+S     T  + C+ +C  +C          CPL+C + C+  + P   N      +    C+L CA S CT   ST    
Subjt:  MAIKCGLIVCLFLSSLSIAHSFFDDKTQVEICFKSCLNVCLYDKKSIRFLCPLKCTKICV--ADPWTKNFQALLTKKDSSCELDCATSKCTNSISTNDII

Query:  DEKEMGKCVDSCTQKCS
         EKE+G CVDSC+Q CS
Subjt:  DEKEMGKCVDSCTQKCS

TrEMBL top hitse value%identityAlignment
A0A0A0K781 Uncharacterized protein1.9e-0733.33Show/hide
Query:  NVMAIKCGLIVCLFLSSLSIAHSFFDDKTQVEICFKSCLNVCLYDKKSIRFLCPLKCTKICVADPWTKNFQALLTKKDSS----CELDCATSKCTNSIST
        NV+A K  L+  L L+SLS A+S     T  + C+ +C  +C          CPL+C + C+   +  +   ++ ++       C+L CA S CT   ST
Subjt:  NVMAIKCGLIVCLFLSSLSIAHSFFDDKTQVEICFKSCLNVCLYDKKSIRFLCPLKCTKICVADPWTKNFQALLTKKDSS----CELDCATSKCTNSIST

Query:  NDIIDEKEMGKCVDSCTQKCSNN
             E+++G+CVDSC+Q CS N
Subjt:  NDIIDEKEMGKCVDSCTQKCSNN

A0A0A0KC12 Uncharacterized protein1.1e-65100Show/hide
Query:  MESSNVMAIKCGLIVCLFLSSLSIAHSFFDDKTQVEICFKSCLNVCLYDKKSIRFLCPLKCTKICVADPWTKNFQALLTKKDSSCELDCATSKCTNSIST
        MESSNVMAIKCGLIVCLFLSSLSIAHSFFDDKTQVEICFKSCLNVCLYDKKSIRFLCPLKCTKICVADPWTKNFQALLTKKDSSCELDCATSKCTNSIST
Subjt:  MESSNVMAIKCGLIVCLFLSSLSIAHSFFDDKTQVEICFKSCLNVCLYDKKSIRFLCPLKCTKICVADPWTKNFQALLTKKDSSCELDCATSKCTNSIST

Query:  NDIIDEKEMGKCVDSCTQKCSNNEN
        NDIIDEKEMGKCVDSCTQKCSNNEN
Subjt:  NDIIDEKEMGKCVDSCTQKCSNNEN

A0A1S3CDU0 thionin-like protein 21.6e-3061.98Show/hide
Query:  MESSNVMAIKCGLIVCLFLSSLSIAHSFFDDKTQVEICFKSCLNVCLYDKKSIRFLCPLKCTKICVADPWTKNFQALLTKKDSSCELDCATSKCTNSIST
        MESSNVMA+KCGLIV LFLSSLSIA SF D+ T +  CFKSCL  C+ +KK+ R LCP KCTKICVADP T +F+ +     SSCEL CA S C    ST
Subjt:  MESSNVMAIKCGLIVCLFLSSLSIAHSFFDDKTQVEICFKSCLNVCLYDKKSIRFLCPLKCTKICVADPWTKNFQALLTKKDSSCELDCATSKCTNSIST

Query:  NDIIDEKEMGKCVDSCTQKCS
         +  DEKE+ KCV SC Q CS
Subjt:  NDIIDEKEMGKCVDSCTQKCS

A0A5N5GA29 Uncharacterized protein2.4e-0736.44Show/hide
Query:  IKCGLIVCLFLSSL---SIAHSFFDDKTQVEICFKSCLNVCLYDKKSIRFLCPLKCTKICVADPWTKNFQALLTKKDSSCELDCATSKCTNSISTNDIID
        ++  ++VCL L  L     A  FF      ++C+ +C  +C+  K      C   C K C A   T +FQ   T     C+L CATS CT+ IST D  +
Subjt:  IKCGLIVCLFLSSL---SIAHSFFDDKTQVEICFKSCLNVCLYDKKSIRFLCPLKCTKICVADPWTKNFQALLTKKDSSCELDCATSKCTNSISTNDIID

Query:  EKEMGKCVDSCTQKCSNN
         + +GKCVDSC+  CS N
Subjt:  EKEMGKCVDSCTQKCSNN

A0A6P8CEJ2 thionin-like protein 24.1e-0736.04Show/hide
Query:  IVCLFLSSLSIAHSFFDDKTQVEICFKSCLNVCLYDKKSIRFLCPLKCTKICVADPWTKN-FQALLTKKDSSCELDCATSKCTNSISTNDIIDEKEMGKC
        +VC+ L  L  AH           C+KSC  +C+       F C  +C K C+    + +   AL    D  C+L C+TS CTN +ST     EKE+G C
Subjt:  IVCLFLSSLSIAHSFFDDKTQVEICFKSCLNVCLYDKKSIRFLCPLKCTKICVADPWTKN-FQALLTKKDSSCELDCATSKCTNSISTNDIIDEKEMGKC

Query:  VDSCTQKCSNN
        V+SC+  CSN+
Subjt:  VDSCTQKCSNN

SwissProt top hitse value%identityAlignment
A8MRP4 Thionin-like protein 22.2e-0533.72Show/hide
Query:  CFKSCLNVCLYDKKSIRFL-CPLKCTKICVADPWTKNFQA-LLTKKDSSCELDCATSKCTNSISTNDIIDEKEMGKCVDSCTQKCS
        C+ +CL  C    K  ++L CP  CTK C+  P   +  +  + + D  C+L CAT  C  S+S+    + + +  CVDSC+ KC+
Subjt:  CFKSCLNVCLYDKKSIRFL-CPLKCTKICVADPWTKNFQA-LLTKKDSSCELDCATSKCTNSISTNDIIDEKEMGKCVDSCTQKCS

Arabidopsis top hitse value%identityAlignment
AT1G12660.1 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660.5.5e-0438.03Show/hide
Query:  EICFKSCLNVCLYDKKSIRFL-CPLKCTKICVADPWTKNFQALLTKKD---SSCELDCATSKCTNSISTND
        ++C+  CL  C      I+ L CP  C K C   P   +F+A L + D   S CEL CAT +C +S S +D
Subjt:  EICFKSCLNVCLYDKKSIRFL-CPLKCTKICVADPWTKNFQALLTKKD---SSCELDCATSKCTNSISTND

AT1G12663.1 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660.1.6e-0633.72Show/hide
Query:  CFKSCLNVCLYDKKSIRFL-CPLKCTKICVADPWTKNFQA-LLTKKDSSCELDCATSKCTNSISTNDIIDEKEMGKCVDSCTQKCS
        C+ +CL  C    K  ++L CP  CTK C+  P   +  +  + + D  C+L CAT  C  S+S+    + + +  CVDSC+ KC+
Subjt:  CFKSCLNVCLYDKKSIRFL-CPLKCTKICVADPWTKNFQA-LLTKKDSSCELDCATSKCTNSISTNDIIDEKEMGKCVDSCTQKCS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGCAGCAATGTTATGGCAATCAAATGTGGTTTAATTGTTTGTCTATTCCTAAGCTCGCTCTCCATCGCCCATTCCTTCTTCGACGATAAAACTCAGGTTGAAAT
ATGCTTCAAATCTTGTTTAAACGTATGTCTCTACGATAAGAAAAGCATTCGTTTTTTGTGCCCGTTGAAATGCACCAAAATTTGCGTGGCCGACCCGTGGACCAAAAACT
TCCAAGCCCTACTGACCAAAAAGGATTCGTCGTGTGAGCTCGACTGCGCAACTTCTAAGTGTACCAACTCAATTAGCACGAACGATATTATAGATGAAAAAGAAATGGGG
AAGTGTGTGGATTCTTGCACTCAAAAATGTTCCAACAATGAGAATTGA
mRNA sequenceShow/hide mRNA sequence
GGATCAAGAGAGAACAAATATATTGTTAAAGAGAAAAGCTTTTGATTTAGAGAATATCCTCCGTCTTCATCAATTCATCGATAATTAATAGAGATGGAGAGCAGCAATGT
TATGGCAATCAAATGTGGTTTAATTGTTTGTCTATTCCTAAGCTCGCTCTCCATCGCCCATTCCTTCTTCGACGATAAAACTCAGGTTGAAATATGCTTCAAATCTTGTT
TAAACGTATGTCTCTACGATAAGAAAAGCATTCGTTTTTTGTGCCCGTTGAAATGCACCAAAATTTGCGTGGCCGACCCGTGGACCAAAAACTTCCAAGCCCTACTGACC
AAAAAGGATTCGTCGTGTGAGCTCGACTGCGCAACTTCTAAGTGTACCAACTCAATTAGCACGAACGATATTATAGATGAAAAAGAAATGGGGAAGTGTGTGGATTCTTG
CACTCAAAAATGTTCCAACAATGAGAATTGATGATGTGGATCTCCTAAATGAACCTTTACCTCTTTTTTTTTTTCTTTTTCTCCACAAAAAATATAAGTCAGTTTTGTAT
GAAACAAATTTATTGTTGTATTGTTTCATCATATTATAAATGAAACTCCATTATTTATGTTGGAAGAAAGTTTATGTTTTTTAAATCGATTCACACCCTTTTATAAATTT
AATTGATAGAATAAATTCATATTTAAATTGATACAAAAAT
Protein sequenceShow/hide protein sequence
MESSNVMAIKCGLIVCLFLSSLSIAHSFFDDKTQVEICFKSCLNVCLYDKKSIRFLCPLKCTKICVADPWTKNFQALLTKKDSSCELDCATSKCTNSISTNDIIDEKEMG
KCVDSCTQKCSNNEN