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CSPI07G21410 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G21410
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRibosomal protein L37
Genome locationChr7:18324624..18326022
RNA-Seq ExpressionCSPI07G21410
SyntenyCSPI07G21410
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001569 - Ribosomal protein L37e
IPR011331 - Ribosomal protein L37ae/L37e
IPR011332 - Zinc-binding ribosomal protein
IPR018267 - Ribosomal protein L37e, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141772.1 60S ribosomal protein L37-3 [Cucumis sativus]1.6e-45100Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA

XP_022953178.1 60S ribosomal protein L37-3-like [Cucurbita moschata]1.3e-4496.84Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRC+ACAFPAARKRKYNWSVKAIRRKTTGTGRMRY+RHVPRRFKSGFREGTEAAPRNKG+AASA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA

XP_022964011.1 60S ribosomal protein L37-3-like [Cucurbita moschata]6.0e-4597.89Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRC+ACAFPAARKRKYNWSVKAIRRKTTGTGRMRY+RHVPRRFKSGFREGTEAAPRNKGAAASA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA

XP_023000413.1 60S ribosomal protein L37-3-like [Cucurbita maxima]1.8e-4496.84Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKS+C+ACAFPAARKRKYNWSVKAIRRKTTGTGRMRY+RHVPRRFKSGFREGTEAAPRNKGAAASA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA

XP_038902074.1 60S ribosomal protein L37-3 [Benincasa hispida]1.3e-4497.89Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRC+ACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPR+KGAAASA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA

TrEMBL top hitse value%identityAlignment
A0A0A0K941 Ribosomal protein L377.7e-46100Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA

A0A1S3CGU0 Ribosomal protein L377.7e-46100Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA

A0A5D3BYC5 Ribosomal protein L377.7e-46100Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA

A0A6J1HHN6 Ribosomal protein L372.9e-4597.89Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRC+ACAFPAARKRKYNWSVKAIRRKTTGTGRMRY+RHVPRRFKSGFREGTEAAPRNKGAAASA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA

A0A6J1JVQ3 Ribosomal protein L376.5e-4596.84Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRC+ACAFPAARKRKYNWSVKAIRRKTTGTGRMRY+RHVPRRFKSGFREGTEAAPRNKG+AASA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA

SwissProt top hitse value%identityAlignment
Q43292 60S ribosomal protein L37-27.6e-4388.42Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
        M KGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRC+ACA+PAARKR YNWSVKAIRRKTTGTGRMRYLR+VPRRFK+GFREGTEA PRNKG A+SA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA

Q8LEM8 60S ribosomal protein L37-31.3e-4287.37Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
        MGKGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRC+ACA+PAARKR YNWSVKAIRRKTTGTGRMRYLR+VPRRFK+GFREGTEA PR+K +A+SA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA

Q8LFH7 60S ribosomal protein L37-16.5e-4286.32Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
        MGKGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRC+ACA+PAARKR YNWSVKAIRRKTTGTGRMRYLR+VPRRFK+ FREGT+A PRNK AA+S+
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA

Q90YT1 60S ribosomal protein L375.7e-3067.37Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
        M KGT SFGKRRNKTHTLC RCG +++HLQKS C  C +PA RKRKYNWS KA RR TTGTGRMR+++ V RRF++GFREGT   PR    AAS+
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA

Q9VXX8 Probable 60S ribosomal protein L37-A7.4e-3068.48Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAA
        M KGT SFGKR NKTHTLC RCGR S+H+QKS CA C +PAA+ R YNWSVKA RRKTTGTGRM++L+ V RRF++GFREGT+A P+   A+
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAA

Arabidopsis top hitse value%identityAlignment
AT1G15250.1 Zinc-binding ribosomal protein family protein4.6e-4386.32Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
        MGKGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRC+ACA+PAARKR YNWSVKAIRRKTTGTGRMRYLR+VPRRFK+ FREGT+A PRNK AA+S+
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA

AT1G52300.1 Zinc-binding ribosomal protein family protein5.4e-4488.42Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
        M KGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRC+ACA+PAARKR YNWSVKAIRRKTTGTGRMRYLR+VPRRFK+GFREGTEA PRNKG A+SA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA

AT3G16080.1 Zinc-binding ribosomal protein family protein9.3e-4487.37Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
        MGKGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRC+ACA+PAARKR YNWSVKAIRRKTTGTGRMRYLR+VPRRFK+GFREGTEA PR+K +A+SA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAGGGTACGGGCAGTTTTGGTAAGAGGAGGAACAAGACCCATACTCTCTGTGTGCGGTGTGGCCGCCGCAGCTTCCATCTCCAGAAGAGTCGTTGTGCAGCATG
TGCTTTTCCTGCTGCTCGCAAGCGCAAATATAACTGGAGTGTGAAGGCAATTAGAAGAAAGACAACCGGAACTGGAAGGATGAGGTACTTGCGCCATGTTCCGCGTAGAT
TCAAGAGCGGCTTCAGAGAGGGTACGGAAGCTGCACCCAGGAATAAAGGAGCTGCAGCATCAGCATAA
mRNA sequenceShow/hide mRNA sequence
ATAGCCAAACTGCATATAGAATTCTTCCGCCCTAGGGTTTCTTCGTCCTGCATCAATGGGAAAGGGTACGGGCAGTTTTGGTAAGAGGAGGAACAAGACCCATACTCTCT
GTGTGCGGTGTGGCCGCCGCAGCTTCCATCTCCAGAAGAGTCGTTGTGCAGCATGTGCTTTTCCTGCTGCTCGCAAGCGCAAATATAACTGGAGTGTGAAGGCAATTAGA
AGAAAGACAACCGGAACTGGAAGGATGAGGTACTTGCGCCATGTTCCGCGTAGATTCAAGAGCGGCTTCAGAGAGGGTACGGAAGCTGCACCCAGGAATAAAGGAGCTGC
AGCATCAGCATAAGGTTTTGGAAGAAGTTCAATTTAATTTCAGTACCCACCTATAGTTTTCAGTAGGGGTTTTACTCATCTGAGAATCATTTCATATAATTTTGTTTTTT
CTAGTTTTTGACTTTTCATGATTTAGTTGAACGATCGCTGTTTCTTTAAAATGTATTGTTTGAATTTTGGACAAATGATGAATCAGATTGTTCGTATTCTGCTACTTGCT
TCTTCATTCTTCAGTATGCTCTATTACCCAACGCCCATTCGTTCCAAAGTTGCATCTGTTGGGAGAATCATTGTCAAATCACTAGAATGATTAATTGGGTCACCTCGAAG
GTTGTTTAATCAAAGCAAA
Protein sequenceShow/hide protein sequence
MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA