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CSPI07G21450 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G21450
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionDynein light chain
Genome locationChr7:18344122..18345593
RNA-Seq ExpressionCSPI07G21450
SyntenyCSPI07G21450
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008462164.1 PREDICTED: dynein light chain LC6, flagellar outer arm-like [Cucumis melo]1.7e-4798.96Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSGP
        MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS P
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSGP

XP_011659570.1 dynein light chain LC6, flagellar outer arm [Cucumis sativus]3.4e-48100Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSGP
        MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSGP
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSGP

XP_022964212.1 dynein light chain LC6, flagellar outer arm-like isoform X1 [Cucurbita moschata]2.0e-4394.68Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS
        MLEGKA VQDTDMP KMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFD++YGSGWQCVVGSNFGCFFTHSKGSFIYFKL TLNFLIFKGVTSS
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS

XP_023513963.1 dynein light chain LC6, flagellar outer arm-like [Cucurbita pepo subsp. pepo]2.0e-4394.68Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS
        MLEGKA VQDTDMP KMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFD++YGSGWQCVVGSNFGCFFTHSKGSFIYFKL TLNFLIFKGVTSS
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS

XP_038897874.1 dynein light chain LC6, flagellar outer arm-like [Benincasa hispida]5.0e-4796.88Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSGP
        MLEGKAL+QDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDN+YGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS P
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSGP

TrEMBL top hitse value%identityAlignment
A0A0A0K947 Dynein light chain1.7e-48100Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSGP
        MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSGP
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSGP

A0A1S3CGU5 Dynein light chain8.3e-4898.96Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSGP
        MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS P
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSGP

A0A5A7UW48 Dynein light chain8.3e-4898.96Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSGP
        MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS P
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSGP

A0A6J1HH84 Dynein light chain9.5e-4494.68Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS
        MLEGKA VQDTDMP KMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFD++YGSGWQCVVGSNFGCFFTHSKGSFIYFKL TLNFLIFKGVTSS
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS

A0A6J1KDK4 Dynein light chain9.5e-4494.68Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS
        MLEGKA VQDTDMP KMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFD++YGSGWQCVVGSNFGCFFTHSKGSFIYFKL TLNFLIFKGVTSS
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS

SwissProt top hitse value%identityAlignment
O02414 Dynein light chain LC6, flagellar outer arm4.7e-1647.19Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK
        M E KA++++ DMP  MQ  A+D A++AL+ +++   K IAA+IKK+FD KY   W C+VG NFG + TH    FIYF L  +  L+FK
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK

P61285 Dynein light chain 1, cytoplasmic1.4e-1544.94Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK
        M + KA++++ DM  +MQ  +++ A++AL+ Y++   K IAAHIKK+FD KY   W C+VG NFG + TH    FIYF L  +  L+FK
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK

P63167 Dynein light chain 1, cytoplasmic1.4e-1544.94Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK
        M + KA++++ DM  +MQ  +++ A++AL+ Y++   K IAAHIKK+FD KY   W C+VG NFG + TH    FIYF L  +  L+FK
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK

Q22799 Dynein light chain 1, cytoplasmic8.1e-1646.07Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK
        M++ KA++++ DM   MQ  A+D A++AL+ Y++   K IAA+IKK+FD KY   W C+VG NFG + TH    FIYF L  +  L+FK
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK

Q24117 Dynein light chain 1, cytoplasmic1.4e-1546.07Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK
        M + KA++++ DM  +MQ  A+D A++AL+ Y++   K IAA+IKK+FD KY   W C+VG NFG + TH    FIYF L  +  L+FK
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK

Arabidopsis top hitse value%identityAlignment
AT1G52240.1 RHO guanyl-nucleotide exchange factor 113.5e-2277.97Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCV
        MLEGKA+V+D+DMP KMQ+QAM  AS+ALDL+DVFDCKSIA HIKK+FD +YGSGWQCV
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCV

AT1G52240.2 RHO guanyl-nucleotide exchange factor 112.8e-4079.57Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTS
        MLEGKA+V+D+DMP KMQ+QAM  AS+ALDL+DVFDCKSIA HIKK+FD +YGSGWQCVVGSNFGCFFTHSKG+FIYF+LETL FLIFKG ++
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTS

AT3G16120.1 Dynein light chain type 1 family protein1.0e-3778.26Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVT
        MLEGKA V++TDMP KMQ+QAM  AS++LDL+DVFD  SIAAHIKK+FD +YGSGWQCVVG+NFGCFFTHSKG+FIYF L TLNFLIFKG T
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVT

AT4G27360.1 Dynein light chain type 1 family protein2.4e-2355.56Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKG
        MLEGKA++ DTDM   M+  A+  ASKALD +DV +   IA  IKK+FD  YGSGWQC+VG++FG F TH  G FI+F + +L  L+FKG
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKG

AT5G20110.1 Dynein light chain type 1 family protein5.7e-1750Show/hide
Query:  DMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK
        DMPG MQ  A   A   LD  + F  K +A ++KK+FD  YG  W C+VGS+FG F THS G FIYF ++ L  L+FK
Subjt:  DMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGAAGGTAAAGCTTTGGTACAGGATACAGATATGCCTGGCAAGATGCAGATCCAAGCCATGGACGCTGCTTCTAAAGCTTTGGATCTCTATGATGTTTTTGACTG
CAAATCCATTGCTGCCCACATAAAAAAGGACTTCGACAACAAATATGGAAGCGGATGGCAATGTGTGGTTGGTTCAAATTTTGGTTGTTTCTTCACCCACTCCAAGGGGT
CTTTCATCTACTTCAAACTGGAAACCCTCAACTTTCTCATCTTCAAAGGGGTGACTTCTTCGGGCCCATGA
mRNA sequenceShow/hide mRNA sequence
AAGAGTTTGTTGGGGTTCAGACCGCCTTTCATCGGATGGCATCAAAGAATTCACGTGGATCCTTTACTTTGATCCACATCATAGATGGAGTAATTTTTTTTTTGTTTCAA
TGAGCAAAATTATTTAACTTTAGGACAGGAGTTAACAACCCTATCCCACATCGACTCATTGGCAGAAAAATCCAAAGCAAAAACTTGGCTTCATTATTGGCCTCACCACC
TTTATCCTTTCTTTACCCATAATTATCTTTAGCGCAGGGAAAAGGGAAAGTAAGAGATAGAGAGAGAGAGAGAGAGAGAAAAGAGAGATTTTTCATTAATAGAATATTGT
TAAAAGTCCTTAAAGTGGGGAGAGAAAATGACAGGAAAATAATATTTATCGGAAGATGTACCAGCTTAAAACTTGAATTTCAAAAGATTCCATCACATTTGGAAGAGGGG
CTTCCAGAGTTTTTCCTTGTATAAAATCATCATCCATTTACCTCCTTCTTCGTGTTTCTTTGTTCCATTATACCCTTGGAAGAAGAAACAAAGAAACACTTGAGATTGGG
ATAATCTTTTCTGGTTTTGAAGATAAGACTCAAAAGAGATCGCCGAGAGTAAATCCCTACCAATTCTCTCTTTTCAGCAAAGGGGAAAGGATGTTGGAAGGTAAAGCTTT
GGTACAGGATACAGATATGCCTGGCAAGATGCAGATCCAAGCCATGGACGCTGCTTCTAAAGCTTTGGATCTCTATGATGTTTTTGACTGCAAATCCATTGCTGCCCACA
TAAAAAAGGACTTCGACAACAAATATGGAAGCGGATGGCAATGTGTGGTTGGTTCAAATTTTGGTTGTTTCTTCACCCACTCCAAGGGGTCTTTCATCTACTTCAAACTG
GAAACCCTCAACTTTCTCATCTTCAAAGGGGTGACTTCTTCGGGCCCATGATTTTCAGTTGGCGTTTTTTCTTTATTTGAATCTCTAGAGAATTTGAGAAGCAGAAACAA
AAGAGGAAAGGCTTTCGCTTTCGCTTTCCTGTGGCTACGTCAATTCGATTGAAAGGGTAAGGTCGAATCGAAGAAGCGTAAGGGAGATGGTAGGAAATGTACAAATTGAC
ATTGTCCAATTGTTTGGATGTTTATGTTCAAAAAGCTTTTAATGCTTTTGTGGGTATACTATGTAAATATTGAAATCAGGGGAGACGGTTCTTAATCCTTTTTCACGTAT
TTTCATTGCCCCTTTGCTTCGATATCTATTTTCTGCAAAAAATGGCTAATTAATGGATAAAGAAAATCATTTACGGAAA
Protein sequenceShow/hide protein sequence
MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSGP