; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI07G21570 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G21570
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionprotein THYLAKOID ASSEMBLY 8, chloroplastic
Genome locationChr7:18405734..18406733
RNA-Seq ExpressionCSPI07G21570
SyntenyCSPI07G21570
Gene Ontology termsGO:0000373 - Group II intron splicing (biological process)
GO:0009658 - chloroplast organization (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044190 - Protein THYLAKOID ASSEMBLY 8-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059315.1 uncharacterized protein E6C27_scaffold242G00390 [Cucumis melo var. makuwa]2.2e-10994.32Show/hide
Query:  MASSLHSTFLKSQISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER
        MASSL STFLKSQISIPIP STAT+ VAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER
Subjt:  MASSLHSTFLKSQISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER

Query:  CALALEVFAVIKSEYRAELGLYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGSMIKADDYMI
        CALALEVFAVI+SEYRAELGLYAEVAAALSRNGAAEEIDRLV DLDG DGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRR GWGSMIK DDYMI
Subjt:  CALALEVFAVIKSEYRAELGLYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGSMIKADDYMI

Query:  KVLSKGLRRLGEIELADEINREFEDLVGS
        KV+SKGLRR+GE+ELADEINREF+DLVGS
Subjt:  KVLSKGLRRLGEIELADEINREFEDLVGS

XP_004141838.1 protein THYLAKOID ASSEMBLY 8, chloroplastic [Cucumis sativus]8.3e-117100Show/hide
Query:  MASSLHSTFLKSQISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER
        MASSLHSTFLKSQISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER
Subjt:  MASSLHSTFLKSQISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER

Query:  CALALEVFAVIKSEYRAELGLYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGSMIKADDYMI
        CALALEVFAVIKSEYRAELGLYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGSMIKADDYMI
Subjt:  CALALEVFAVIKSEYRAELGLYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGSMIKADDYMI

Query:  KVLSKGLRRLGEIELADEINREFEDLVGSF
        KVLSKGLRRLGEIELADEINREFEDLVGSF
Subjt:  KVLSKGLRRLGEIELADEINREFEDLVGSF

XP_008462172.1 PREDICTED: uncharacterized protein LOC103500597 [Cucumis melo]1.5e-11095.2Show/hide
Query:  MASSLHSTFLKSQISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER
        MASSLHSTFLKSQISIPIP STAT+ VAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER
Subjt:  MASSLHSTFLKSQISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER

Query:  CALALEVFAVIKSEYRAELGLYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGSMIKADDYMI
        CALALEVFAVI+SEYRAELGLYAEVAAALSRNGAAEEIDRLV DLDG DGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRR GWGSMIK DDYMI
Subjt:  CALALEVFAVIKSEYRAELGLYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGSMIKADDYMI

Query:  KVLSKGLRRLGEIELADEINREFEDLVGS
        KV+SKGLRR+GEIELADEINREF+DLVGS
Subjt:  KVLSKGLRRLGEIELADEINREFEDLVGS

XP_022992386.1 protein THYLAKOID ASSEMBLY 8, chloroplastic [Cucurbita maxima]9.3e-9282.17Show/hide
Query:  MASSLHSTFLKSQISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER
        MA SLHSTFLKSQI IPIP S AT+ V VS  VRCGPRDNRGPLVKGRTLS EAIQAIQSLKRAE+SDPTKL+QVLSTTLSRLLKADLVATLKELLRQ+R
Subjt:  MASSLHSTFLKSQISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER

Query:  CALALEVFAVIKSEYRAELGLYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGSMIKADDYMI
        CALALEVFAV++SEY  +LG+YAEVAAALSRNGA EEIDRLV DL+  D VI+   DDKGLIKLIKAVI G+RRESTVRIYRMM+R GWGS IKADDYM+
Subjt:  CALALEVFAVIKSEYRAELGLYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGSMIKADDYMI

Query:  KVLSKGLRRLGEIELADEINREFEDLVGSF
        +VLSKGLRRLGE+E+ADEIN +F+DLVGSF
Subjt:  KVLSKGLRRLGEIELADEINREFEDLVGSF

XP_038898717.1 protein THYLAKOID ASSEMBLY 8, chloroplastic [Benincasa hispida]2.3e-9886.9Show/hide
Query:  MASSLHSTFLKSQISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER
        MASS+HSTFLKSQISIPIP S A + VAVS  VRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVA+LKELLRQ+R
Subjt:  MASSLHSTFLKSQISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER

Query:  CALALEVFAVIKSEYRAELGLYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGSMIKADDYMI
        CALALEVFAVI+SEY A+LG+YAEVAAALSRNGAAEEIDRLV DLDGGD +I+W  DDKGLIKLIKAVISG+RRESTVRIYRMMRR GWGS IKADDY++
Subjt:  CALALEVFAVIKSEYRAELGLYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGSMIKADDYMI

Query:  KVLSKGLRRLGEIELADEINREFEDLVGS
        +VLSKGLRR GE+ELADEINREF+DLVG+
Subjt:  KVLSKGLRRLGEIELADEINREFEDLVGS

TrEMBL top hitse value%identityAlignment
A0A0A0K6N6 Uncharacterized protein4.0e-117100Show/hide
Query:  MASSLHSTFLKSQISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER
        MASSLHSTFLKSQISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER
Subjt:  MASSLHSTFLKSQISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER

Query:  CALALEVFAVIKSEYRAELGLYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGSMIKADDYMI
        CALALEVFAVIKSEYRAELGLYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGSMIKADDYMI
Subjt:  CALALEVFAVIKSEYRAELGLYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGSMIKADDYMI

Query:  KVLSKGLRRLGEIELADEINREFEDLVGSF
        KVLSKGLRRLGEIELADEINREFEDLVGSF
Subjt:  KVLSKGLRRLGEIELADEINREFEDLVGSF

A0A1S3CGD3 uncharacterized protein LOC1035005977.4e-11195.2Show/hide
Query:  MASSLHSTFLKSQISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER
        MASSLHSTFLKSQISIPIP STAT+ VAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER
Subjt:  MASSLHSTFLKSQISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER

Query:  CALALEVFAVIKSEYRAELGLYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGSMIKADDYMI
        CALALEVFAVI+SEYRAELGLYAEVAAALSRNGAAEEIDRLV DLDG DGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRR GWGSMIK DDYMI
Subjt:  CALALEVFAVIKSEYRAELGLYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGSMIKADDYMI

Query:  KVLSKGLRRLGEIELADEINREFEDLVGS
        KV+SKGLRR+GEIELADEINREF+DLVGS
Subjt:  KVLSKGLRRLGEIELADEINREFEDLVGS

A0A5A7V0E2 Uncharacterized protein1.1e-10994.32Show/hide
Query:  MASSLHSTFLKSQISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER
        MASSL STFLKSQISIPIP STAT+ VAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER
Subjt:  MASSLHSTFLKSQISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER

Query:  CALALEVFAVIKSEYRAELGLYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGSMIKADDYMI
        CALALEVFAVI+SEYRAELGLYAEVAAALSRNGAAEEIDRLV DLDG DGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRR GWGSMIK DDYMI
Subjt:  CALALEVFAVIKSEYRAELGLYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGSMIKADDYMI

Query:  KVLSKGLRRLGEIELADEINREFEDLVGS
        KV+SKGLRR+GE+ELADEINREF+DLVGS
Subjt:  KVLSKGLRRLGEIELADEINREFEDLVGS

A0A6J1GQS0 protein THYLAKOID ASSEMBLY 8, chloroplastic2.9e-9181.3Show/hide
Query:  MASSLHSTFLKSQISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER
        MA SLHSTFLKSQI IPIP S A + V VS  VRCGPRDNRGPLVKGRTLS EAIQAIQSLKRAE+SDPTKL+QVLSTTLSRLLKADLVATLKELLRQ+R
Subjt:  MASSLHSTFLKSQISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER

Query:  CALALEVFAVIKSEYRAELGLYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGSMIKADDYMI
        CALALEVFAV++SEY A+LG+YAEVAAALSRNGA EEIDRLV DL+  D VI+   DDKGLIKLIKAVI G+RRESTVRIYRMM+R GWGS IKADDY +
Subjt:  CALALEVFAVIKSEYRAELGLYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGSMIKADDYMI

Query:  KVLSKGLRRLGEIELADEINREFEDLVGSF
        +VLSKGLRRLGE+E+ADE+N +F+DLVGSF
Subjt:  KVLSKGLRRLGEIELADEINREFEDLVGSF

A0A6J1JTE8 protein THYLAKOID ASSEMBLY 8, chloroplastic4.5e-9282.17Show/hide
Query:  MASSLHSTFLKSQISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER
        MA SLHSTFLKSQI IPIP S AT+ V VS  VRCGPRDNRGPLVKGRTLS EAIQAIQSLKRAE+SDPTKL+QVLSTTLSRLLKADLVATLKELLRQ+R
Subjt:  MASSLHSTFLKSQISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER

Query:  CALALEVFAVIKSEYRAELGLYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGSMIKADDYMI
        CALALEVFAV++SEY  +LG+YAEVAAALSRNGA EEIDRLV DL+  D VI+   DDKGLIKLIKAVI G+RRESTVRIYRMM+R GWGS IKADDYM+
Subjt:  CALALEVFAVIKSEYRAELGLYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGSMIKADDYMI

Query:  KVLSKGLRRLGEIELADEINREFEDLVGSF
        +VLSKGLRRLGE+E+ADEIN +F+DLVGSF
Subjt:  KVLSKGLRRLGEIELADEINREFEDLVGSF

SwissProt top hitse value%identityAlignment
Q1PFH7 Pentatricopeptide repeat-containing protein At1g623505.2e-0525.7Show/hide
Query:  LSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFAVIKSE--YRAELGLYAEVAAALSRNGAAEEIDRLVSDLDG
        +S E + A + LKR + +   +L + + + +SRLLK+DLV+ L E  RQ +  L ++++ V++ E  YR ++  Y ++   L+RN   +E  ++  DL  
Subjt:  LSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFAVIKSE--YRAELGLYAEVAAALSRNGAAEEIDRLVSDLDG

Query:  GDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGSMIKADDYMIKVLSKGLRRLGEIELADEINREFEDL
         + +     D      L++  +        +R+Y  MR     S  +      +V+ KGL  +   EL +++  +F +L
Subjt:  GDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGSMIKADDYMIKVLSKGLRRLGEIELADEINREFEDL

Q9LVW6 Protein THYLAKOID ASSEMBLY 8, chloroplastic7.5e-4450Show/hide
Query:  ISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTT---LSRLLKADLVATLKELLRQERCALALEVFAV
        +S+ +P  T  S       +RCGPRDNRGPL+KGR LS EAIQ+IQSLKRA R+  +     LS T   L RL+K+DL++ L+ELLRQ+ C LA+ V + 
Subjt:  ISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTT---LSRLLKADLVATLKELLRQERCALALEVFAV

Query:  IKSEY-RAELGLYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGS-MIKADDYMIKVLSKGLR
        +++EY   +L LYA++  AL+RN   +EIDRL+ ++DG    I+   DDK L KLI+AV+   RRES VR+Y +MR  GWGS   +AD+Y+ +VLSKGL 
Subjt:  IKSEY-RAELGLYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGS-MIKADDYMIKVLSKGLR

Query:  RLGEIELADEIN
        RLGE +LA +++
Subjt:  RLGEIELADEIN

Q9STF9 Protein THYLAKOID ASSEMBLY 8-like, chloroplastic7.3e-0728.04Show/hide
Query:  RGPLVKGRTL-SIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFAVIKSE--YRAELGLYAEVAAALSRNGAAEE
        RGPL +G+ L   EA+  I  LKR  + D  KL + + T + RLLK D++A + EL RQE  ALA+++F VI+ +  Y+ ++ +Y ++  +L+++   +E
Subjt:  RGPLVKGRTL-SIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFAVIKSE--YRAELGLYAEVAAALSRNGAAEE

Query:  IDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGSMIKADDYMIKVLSKGLRRLGEIELADEINREFEDL
           L   +   +       D +   ++I+  +        + +Y  M +    S    ++   +VL KGL  L    L +++ ++FE+L
Subjt:  IDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGSMIKADDYMIKVLSKGLRRLGEIELADEINREFEDL

Arabidopsis top hitse value%identityAlignment
AT1G62350.1 Pentatricopeptide repeat (PPR) superfamily protein3.7e-0625.7Show/hide
Query:  LSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFAVIKSE--YRAELGLYAEVAAALSRNGAAEEIDRLVSDLDG
        +S E + A + LKR + +   +L + + + +SRLLK+DLV+ L E  RQ +  L ++++ V++ E  YR ++  Y ++   L+RN   +E  ++  DL  
Subjt:  LSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFAVIKSE--YRAELGLYAEVAAALSRNGAAEEIDRLVSDLDG

Query:  GDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGSMIKADDYMIKVLSKGLRRLGEIELADEINREFEDL
         + +     D      L++  +        +R+Y  MR     S  +      +V+ KGL  +   EL +++  +F +L
Subjt:  GDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGSMIKADDYMIKVLSKGLRRLGEIELADEINREFEDL

AT3G27750.1 FUNCTIONS IN: molecular_function unknown5.3e-4550Show/hide
Query:  ISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTT---LSRLLKADLVATLKELLRQERCALALEVFAV
        +S+ +P  T  S       +RCGPRDNRGPL+KGR LS EAIQ+IQSLKRA R+  +     LS T   L RL+K+DL++ L+ELLRQ+ C LA+ V + 
Subjt:  ISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTT---LSRLLKADLVATLKELLRQERCALALEVFAV

Query:  IKSEY-RAELGLYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGS-MIKADDYMIKVLSKGLR
        +++EY   +L LYA++  AL+RN   +EIDRL+ ++DG    I+   DDK L KLI+AV+   RRES VR+Y +MR  GWGS   +AD+Y+ +VLSKGL 
Subjt:  IKSEY-RAELGLYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGS-MIKADDYMIKVLSKGLR

Query:  RLGEIELADEIN
        RLGE +LA +++
Subjt:  RLGEIELADEIN

AT3G46870.1 Pentatricopeptide repeat (PPR) superfamily protein5.2e-0828.04Show/hide
Query:  RGPLVKGRTL-SIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFAVIKSE--YRAELGLYAEVAAALSRNGAAEE
        RGPL +G+ L   EA+  I  LKR  + D  KL + + T + RLLK D++A + EL RQE  ALA+++F VI+ +  Y+ ++ +Y ++  +L+++   +E
Subjt:  RGPLVKGRTL-SIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFAVIKSE--YRAELGLYAEVAAALSRNGAAEE

Query:  IDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGSMIKADDYMIKVLSKGLRRLGEIELADEINREFEDL
           L   +   +       D +   ++I+  +        + +Y  M +    S    ++   +VL KGL  L    L +++ ++FE+L
Subjt:  IDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGSMIKADDYMIKVLSKGLRRLGEIELADEINREFEDL

AT5G09320.1 Vacuolar sorting protein 9 (VPS9) domain3.6e-1732.21Show/hide
Query:  NRGPLVKGRTLSIEAIQAIQSLKRAE--------------RSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFAVIKSE--YRAELGLYA
        NR PL +GR LSIEAIQA+Q+LKRA                S    L +V+ +   RLLK D+VA L+ELLRQ  C+LAL+VF  I+ E  Y+ ++ +Y 
Subjt:  NRGPLVKGRTLSIEAIQAIQSLKRAE--------------RSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFAVIKSE--YRAELGLYA

Query:  EVAAALSRNGAAEEIDRLVSDLDGGDGV---IEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGSMIKADDYMIKVLSKGLRRLGEIELADEIN
        ++   ++ N   EE++ L S +    G+   IEW +       L+  +++    +  +  Y  M+  G+    + D    +VL  GL   GE+ L+  + 
Subjt:  EVAAALSRNGAAEEIDRLVSDLDGGDGV---IEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGSMIKADDYMIKVLSKGLRRLGEIELADEIN

Query:  REFEDLVG
        ++  +  G
Subjt:  REFEDLVG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTTCTCTTCACTCCACATTTCTCAAATCCCAAATCTCAATTCCGATCCCCGCCTCCACCGCTACATCCCCGGTCGCCGTTTCCTTTCGAGTACGGTGCGGCCC
ACGGGACAACCGAGGACCGCTAGTGAAAGGCAGAACCCTAAGCATCGAAGCAATCCAAGCAATTCAATCCCTAAAACGGGCCGAGAGATCCGACCCGACGAAGCTCCAAC
AAGTCCTCTCCACTACACTCTCCCGGCTGCTCAAAGCCGACCTTGTCGCCACCTTAAAGGAACTCCTCCGGCAGGAACGGTGCGCCCTAGCCTTGGAGGTTTTCGCTGTA
ATCAAATCGGAGTACCGTGCCGAATTGGGACTGTACGCGGAGGTGGCAGCGGCGCTGTCGAGGAACGGAGCGGCAGAGGAAATCGACCGACTGGTTAGCGATTTAGACGG
CGGAGATGGAGTGATTGAGTGGGGGGATGATGATAAGGGTTTGATTAAGTTGATTAAGGCGGTGATTAGTGGGAATAGAAGGGAATCGACGGTCAGGATTTATCGGATGA
TGAGGAGGAAGGGTTGGGGATCGATGATTAAAGCTGATGATTATATGATTAAGGTTTTAAGTAAGGGTTTAAGGAGGCTTGGGGAAATAGAGTTGGCTGATGAGATAAAT
AGGGAATTTGAAGACTTAGTGGGCAGTTTTTGA
mRNA sequenceShow/hide mRNA sequence
CCCCCAAGAGGTAATAATAATAAGAATACTGAAAGGTTTTGGGCCTGTTTTTCACGTTAATGGCCCAATACAAAAATACATGAATAGGCCCAAGCCCAAATTCCACTAAT
ATTCGATTTCCCCCAAATCTCAGCAAGGGTATTACAGTCATTGCGAAAAAAAAGAAACCCAATCTCCACATCGCCATGGCTTCTTCTCTTCACTCCACATTTCTCAAATC
CCAAATCTCAATTCCGATCCCCGCCTCCACCGCTACATCCCCGGTCGCCGTTTCCTTTCGAGTACGGTGCGGCCCACGGGACAACCGAGGACCGCTAGTGAAAGGCAGAA
CCCTAAGCATCGAAGCAATCCAAGCAATTCAATCCCTAAAACGGGCCGAGAGATCCGACCCGACGAAGCTCCAACAAGTCCTCTCCACTACACTCTCCCGGCTGCTCAAA
GCCGACCTTGTCGCCACCTTAAAGGAACTCCTCCGGCAGGAACGGTGCGCCCTAGCCTTGGAGGTTTTCGCTGTAATCAAATCGGAGTACCGTGCCGAATTGGGACTGTA
CGCGGAGGTGGCAGCGGCGCTGTCGAGGAACGGAGCGGCAGAGGAAATCGACCGACTGGTTAGCGATTTAGACGGCGGAGATGGAGTGATTGAGTGGGGGGATGATGATA
AGGGTTTGATTAAGTTGATTAAGGCGGTGATTAGTGGGAATAGAAGGGAATCGACGGTCAGGATTTATCGGATGATGAGGAGGAAGGGTTGGGGATCGATGATTAAAGCT
GATGATTATATGATTAAGGTTTTAAGTAAGGGTTTAAGGAGGCTTGGGGAAATAGAGTTGGCTGATGAGATAAATAGGGAATTTGAAGACTTAGTGGGCAGTTTTTGAAA
AATTTGTATAATGTTTGGTTATTACATTATTTTGGGATTATTAACTAATTTGGCAAAGGTGTTGATGAATTATAACATAAAGTTCTATTTATTTATTGTTGTGATGTGAC
AAATCCTTGC
Protein sequenceShow/hide protein sequence
MASSLHSTFLKSQISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFAV
IKSEYRAELGLYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGSMIKADDYMIKVLSKGLRRLGEIELADEIN
REFEDLVGSF