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CSPI07G21960 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G21960
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description30S ribosomal protein S2, chloroplastic
Genome locationChr7:18663816..18665660
RNA-Seq ExpressionCSPI07G21960
SyntenyCSPI07G21960
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0015935 - small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001865 - Ribosomal protein S2
IPR005706 - Ribosomal protein S2, bacteria/mitochondria/plastid
IPR023591 - Ribosomal protein S2, flavodoxin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ASY96366.1 ribosomal protein S2 [Cucumis melo subsp. agrestis]1.5e-3498.67Show/hide
Query:  EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGL
        EACDLVFDAATRGKQFLIVGTKNKA DSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGL
Subjt:  EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGL
ASY96801.1 ribosomal protein S2 [Cucumis melo var. momordica]1.5e-3498.67Show/hide
Query:  EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGL
        EACDLVFDAATRGKQFLIVGTKNKA DSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGL
Subjt:  EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGL
QHB75952.1 ribosomal protein S2 [Cucumis melo subsp. melo]1.5e-3498.67Show/hide
Query:  EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGL
        EACDLVFDAATRGKQFLIVGTKNKA DSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGL
Subjt:  EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGL
QJF46372.1 ribosomal protein S2 [Cucumis melo]1.5e-3498.67Show/hide
Query:  EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGL
        EACDLVFDAATRGKQFLIVGTKNKA DSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGL
Subjt:  EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGL
YP_004841772.1 ribosomal protein S2 [Cucumis melo subsp. melo]1.5e-3498.67Show/hide
Query:  EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGL
        EACDLVFDAATRGKQFLIVGTKNKA DSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGL
Subjt:  EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGL
TrEMBL top hitse value%identityAlignment
A0A1X9Q1S8 30S ribosomal protein S2, chloroplastic7.1e-3598.67Show/hide
Query:  EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGL
        EACDLVFDAATRGKQFLIVGTKNKA DSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGL
Subjt:  EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGL
A0A218KG32 30S ribosomal protein S2, chloroplastic7.1e-3598.67Show/hide
Query:  EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGL
        EACDLVFDAATRGKQFLIVGTKNKA DSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGL
Subjt:  EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGL
A0A249RXU1 30S ribosomal protein S2, chloroplastic7.1e-3598.67Show/hide
Query:  EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGL
        EACDLVFDAATRGKQFLIVGTKNKA DSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGL
Subjt:  EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGL
A0A249RZA5 30S ribosomal protein S2, chloroplastic7.1e-3598.67Show/hide
Query:  EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGL
        EACDLVFDAATRGKQFLIVGTKNKA DSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGL
Subjt:  EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGL
A0A286NFT4 30S ribosomal protein S2, chloroplastic7.1e-3598.67Show/hide
Query:  EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGL
        EACDLVFDAATRGKQFLIVGTKNKA DSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGL
Subjt:  EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGL
SwissProt top hitse value%identityAlignment
A0ZZ24 30S ribosomal protein S2, chloroplastic8.9e-3592Show/hide
Query:  EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGL
        EACDLVFDAA++GKQFLIVGTKNKA DSVARAA R RCHYVNKKWLGGMLTNW TTETRLHKFRDLRTEQKTGGL
Subjt:  EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGL
B1A924 30S ribosomal protein S2, chloroplastic8.9e-3593.33Show/hide
Query:  EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGL
        EACDLVFDAA+RGKQFLIVGTKNKA DSVARAA R RCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTG L
Subjt:  EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGL
Q2L8Z6 30S ribosomal protein S2, chloroplastic8.9e-3592Show/hide
Query:  EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGL
        EACDLVFDAA++GKQFLIVGTKNKA DSVARAA R RCHYVNKKWLGGMLTNW TTETRLHKFRDLRTEQKTGGL
Subjt:  EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGL
Q49L09 30S ribosomal protein S2, chloroplastic3.4e-3492Show/hide
Query:  EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGL
        EACDLVFDAA+RGKQFLIVGTKNKA DSVARAA R RCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQK G L
Subjt:  EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGL
Q4VZP4 30S ribosomal protein S2, chloroplastic1.9e-3798.67Show/hide
Query:  EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGL
        EACDLVFDAATRGKQFLIVGTKNKA DSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGL
Subjt:  EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGL
Arabidopsis top hitse value%identityAlignment
ATCG00160.1 ribosomal protein S21.0e-3389.19Show/hide
Query:  EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGG
        EACDLVFDAA+RGKQFLIVGTKNKA D V+RAA R RCHYVNKKWLGGMLTNWSTTE RLHKFRDLRTEQKT G
Subjt:  EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTCCTCGTTTACTTAGAGCATTCACATATAAAAGTTCAGTCACTTCATCTCACCTGGCGCAATTTCAATTCAGGAGTTCCCATATCATGGTGTCACTCTAGTAG
GAATGTAGGGCAAGCTACTATCCATTTGAGGTCCAGTTTCAGGTGCTATCTGAAGTTTCTTTTCCCAGCATTCAGGAAGGCTTCAAATGCATGGAGGACTATGATTCAAA
GAACCAGTTCGAGCCATCTACTCGTCATTGGCGAGTTTGCTGGATGTATCCAACTCGCTACAAAACTTGAGTGTGCATGTTGGCTTGGCTATGGTGGGCATCATAGTGGT
GGGATTGAAGCTTGTGATTTAGTTTTTGATGCAGCAACTAGGGGCAAACAATTCTTAATTGTTGGTACCAAAAATAAAGCAGTGGATTCAGTAGCCCGGGCTGCAACAAG
GACTCGGTGTCATTATGTTAATAAAAAATGGCTCGGGGGGATGTTAACAAATTGGTCTACTACAGAAACGAGACTTCATAAGTTCAGGGACTTGAGAACGGAACAAAAGA
CGGGGGGACTCAAATGGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGATTTCCTCGTTTACTTAGAGCATTCACATATAAAAGTTCAGTCACTTCATCTCACCTGGCGCAATTTCAATTCAGGAGTTCCCATATCATGGTGTCACTCTAGTAG
GAATGTAGGGCAAGCTACTATCCATTTGAGGTCCAGTTTCAGGTGCTATCTGAAGTTTCTTTTCCCAGCATTCAGGAAGGCTTCAAATGCATGGAGGACTATGATTCAAA
GAACCAGTTCGAGCCATCTACTCGTCATTGGCGAGTTTGCTGGATGTATCCAACTCGCTACAAAACTTGAGTGTGCATGTTGGCTTGGCTATGGTGGGCATCATAGTGGT
GGGATTGAAGCTTGTGATTTAGTTTTTGATGCAGCAACTAGGGGCAAACAATTCTTAATTGTTGGTACCAAAAATAAAGCAGTGGATTCAGTAGCCCGGGCTGCAACAAG
GACTCGGTGTCATTATGTTAATAAAAAATGGCTCGGGGGGATGTTAACAAATTGGTCTACTACAGAAACGAGACTTCATAAGTTCAGGGACTTGAGAACGGAACAAAAGA
CGGGGGGACTCAAATGGAAATAG
Protein sequenceShow/hide protein sequence
MDFLVYLEHSHIKVQSLHLTWRNFNSGVPISWCHSSRNVGQATIHLRSSFRCYLKFLFPAFRKASNAWRTMIQRTSSSHLLVIGEFAGCIQLATKLECACWLGYGGHHSG
GIEACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGLKWK