; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI07G21970 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G21970
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRNA-binding protein with multiple splicing
Genome locationChr7:18666411..18668908
RNA-Seq ExpressionCSPI07G21970
SyntenyCSPI07G21970
Gene Ontology termsGO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059349.1 RNA-binding protein with multiple splicing [Cucumis melo var. makuwa]1.8e-17198.72Show/hide
Query:  MAGTGIHPYHQQWPATAAAAPPPPPPQAASAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFA
        MAGTGIHPYHQQWPA AAAAPPPPPPQAA+AAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFA
Subjt:  MAGTGIHPYHQQWPATAAAAPPPPPPQAASAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFA

Query:  LFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGY
        LFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADAS YDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGY
Subjt:  LFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGY

Query:  PVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSV
        PVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSV
Subjt:  PVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSV

Query:  GMRIQYPFFYQI
        GMRIQYPF YQI
Subjt:  GMRIQYPFFYQI

KAE8646484.1 hypothetical protein Csa_016702 [Cucumis sativus]9.9e-19199.42Show/hide
Query:  MAGTGIHPYHQQWPATAAAAPPPPPPQAASAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFA
        MAGTGIHPYHQQWPA AAAAPPPPPPQAA+AAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFA
Subjt:  MAGTGIHPYHQQWPATAAAAPPPPPPQAASAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFA

Query:  LFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGY
        LFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGY
Subjt:  LFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGY

Query:  PVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSV
        PVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSV
Subjt:  PVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSV

Query:  GMRIQYPFFYQIVFFMLAAERYYLFYWYLKIGSCCLTIYVLE
        GMRIQYPFFYQIVFFMLAAERYYLFYWYLKIGSCCLTIYVLE
Subjt:  GMRIQYPFFYQIVFFMLAAERYYLFYWYLKIGSCCLTIYVLE

TYK03977.1 RNA-binding protein with multiple splicing [Cucumis melo var. makuwa]9.3e-17397.48Show/hide
Query:  MAGTGIHPYHQQWPATAAAAPPPPPPQAASAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFA
        MAGTGIHPYHQQWPA AAAAPPPPPPQAA+AAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFA
Subjt:  MAGTGIHPYHQQWPATAAAAPPPPPPQAASAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFA

Query:  LFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGY
        LFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADAS YDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGY
Subjt:  LFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGY

Query:  PVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSV
        PVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSV
Subjt:  PVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSV

Query:  GMRIQYPFFYQIVFFMLA
        GMRIQYPF YQIVF+ ++
Subjt:  GMRIQYPFFYQIVFFMLA

XP_004141738.1 RNA-binding protein with multiple splicing 2 [Cucumis sativus]1.8e-16899.02Show/hide
Query:  MAGTGIHPYHQQWPATAAAAPPPPPPQAASAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFA
        MAGTGIHPYHQQWPA AAAAPPPPPPQAA+AAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFA
Subjt:  MAGTGIHPYHQQWPATAAAAPPPPPPQAASAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFA

Query:  LFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGY
        LFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGY
Subjt:  LFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGY

Query:  PVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSV
        PVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSV
Subjt:  PVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSV

Query:  GMRIQY
        GMRIQ+
Subjt:  GMRIQY

XP_008462228.1 PREDICTED: RNA-binding protein with multiple splicing [Cucumis melo]5.3e-16898.69Show/hide
Query:  MAGTGIHPYHQQWPATAAAAPPPPPPQAASAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFA
        MAGTGIHPYHQQWPA AAAAPPPPPPQAA+AAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFA
Subjt:  MAGTGIHPYHQQWPATAAAAPPPPPPQAASAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFA

Query:  LFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGY
        LFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADAS YDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGY
Subjt:  LFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGY

Query:  PVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSV
        PVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSV
Subjt:  PVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSV

Query:  GMRIQY
        GMRIQ+
Subjt:  GMRIQY

TrEMBL top hitse value%identityAlignment
A0A0A0K6S7 RRM domain-containing protein8.8e-16999.02Show/hide
Query:  MAGTGIHPYHQQWPATAAAAPPPPPPQAASAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFA
        MAGTGIHPYHQQWPA AAAAPPPPPPQAA+AAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFA
Subjt:  MAGTGIHPYHQQWPATAAAAPPPPPPQAASAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFA

Query:  LFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGY
        LFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGY
Subjt:  LFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGY

Query:  PVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSV
        PVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSV
Subjt:  PVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSV

Query:  GMRIQY
        GMRIQ+
Subjt:  GMRIQY

A0A1S3CH02 RNA-binding protein with multiple splicing2.6e-16898.69Show/hide
Query:  MAGTGIHPYHQQWPATAAAAPPPPPPQAASAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFA
        MAGTGIHPYHQQWPA AAAAPPPPPPQAA+AAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFA
Subjt:  MAGTGIHPYHQQWPATAAAAPPPPPPQAASAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFA

Query:  LFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGY
        LFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADAS YDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGY
Subjt:  LFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGY

Query:  PVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSV
        PVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSV
Subjt:  PVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSV

Query:  GMRIQY
        GMRIQ+
Subjt:  GMRIQY

A0A5A7V0M8 RNA-binding protein with multiple splicing8.5e-17298.72Show/hide
Query:  MAGTGIHPYHQQWPATAAAAPPPPPPQAASAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFA
        MAGTGIHPYHQQWPA AAAAPPPPPPQAA+AAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFA
Subjt:  MAGTGIHPYHQQWPATAAAAPPPPPPQAASAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFA

Query:  LFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGY
        LFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADAS YDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGY
Subjt:  LFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGY

Query:  PVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSV
        PVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSV
Subjt:  PVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSV

Query:  GMRIQYPFFYQI
        GMRIQYPF YQI
Subjt:  GMRIQYPFFYQI

A0A5D3BWV1 RNA-binding protein with multiple splicing4.5e-17397.48Show/hide
Query:  MAGTGIHPYHQQWPATAAAAPPPPPPQAASAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFA
        MAGTGIHPYHQQWPA AAAAPPPPPPQAA+AAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFA
Subjt:  MAGTGIHPYHQQWPATAAAAPPPPPPQAASAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFA

Query:  LFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGY
        LFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADAS YDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGY
Subjt:  LFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGY

Query:  PVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSV
        PVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSV
Subjt:  PVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSV

Query:  GMRIQYPFFYQIVFFMLA
        GMRIQYPF YQIVF+ ++
Subjt:  GMRIQYPFFYQIVFFMLA

A0A6J1GPN3 RNA-binding protein with multiple splicing 2 isoform X18.5e-16494.29Show/hide
Query:  MAGTGIHPYHQQWPATAAAAPPPPPPQAASAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFA
        MAGTGIHPYHQQWPA AAAAPP PPPQAA+AAPPPIPHPHPPQILVDNP RHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFA
Subjt:  MAGTGIHPYHQQWPATAAAAPPPPPPQAASAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFA

Query:  LFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGY
        LFSN Q AIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADA+ YDQSKRLRTGGDYAHT YSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGY
Subjt:  LFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGY

Query:  PVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSV
        PVPPVP+PAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGL SVQ GFKQMKILRQERHTVCFIEFEDVN ATNVHH+LQGAVIPSSGSV
Subjt:  PVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSV

Query:  GMRIQYPFFYQIVFF
        GMRIQYPF YQ   F
Subjt:  GMRIQYPFFYQIVFF

SwissProt top hitse value%identityAlignment
O74452 Cell wall integrity protein scw11.1e-0632.72Show/hide
Query:  GDYAHTGYSSPSPFHAPPPPIWGPH-GYMAPPPPPYDPYGG--YPVPPVPMPAPAPVPAPSS------YVPVQ---NTK---DNPPCNTLFIGNLGENVN
        G  AHT  SS     +P P ++  +  +    PPP  P     YP     +    P  A SS       +P     NT     NPPCNT+++GNL  + +
Subjt:  GDYAHTGYSSPSPFHAPPPPIWGPH-GYMAPPPPPYDPYGG--YPVPPVPMPAPAPVPAPSS------YVPVQ---NTK---DNPPCNTLFIGNLGENVN

Query:  EEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVGMRIQY
        EEEL+ LFS Q G+K++    +    +CF+EFE++  A     +LQG  + SS   G+R+ +
Subjt:  EEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVGMRIQY

Q6ZRY4 RNA-binding protein with multiple splicing 21.3e-1243.68Show/hide
Query:  GRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKN
        G    +EVRT+F++GLP D+K REL  L R   GYE S +     +P+GF +F +   A AAK+AL  + FD E+   L  E AK N
Subjt:  GRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKN

Q8VC52 RNA-binding protein with multiple splicing 21.0e-1243.68Show/hide
Query:  GRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKN
        G    +EVRT+F++GLP D+K REL  L R   GYE S +     +P+GF +F +   A AAK+AL  + FD E+   L  E AK N
Subjt:  GRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKN

Q9W6I1 RNA-binding protein with multiple splicing 22.9e-0731.32Show/hide
Query:  NPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNL-FVKRGIVAD
        N G +  +EVRT+F++GLP D+K REL  L R   GYE S +    ++P+GF  F +   A AAK+AL  + FD E+   L  E AK N    K  ++A 
Subjt:  NPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNL-FVKRGIVAD

Query:  ASVYDQSKRLRTGGDY-AHTGYSSPSPFHAP-PPPIWGPHGYMAPPPPPYDPYGGYPVPPVPMPAPAPVPAPSSYVPVQNTK
         +  +    L  G  + A   Y        P  P  W P+        P  P+  +  P     A A       Y P + T+
Subjt:  ASVYDQSKRLRTGGDY-AHTGYSSPSPFHAP-PPPIWGPHGYMAPPPPPYDPYGGYPVPPVPMPAPAPVPAPSSYVPVQNTK

Q9YGP5 RNA-binding protein with multiple splicing 21.0e-1242.22Show/hide
Query:  DNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKN
        ++   +  +EVRT+F++GLP D+K REL  L R   GYE S +    ++P+GF  F N   A AAK+AL  + FD E+   L  E AK N
Subjt:  DNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKN

Arabidopsis top hitse value%identityAlignment
AT2G42240.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.4e-2838.01Show/hide
Query:  AAAPPPPPPQAASAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQV-NFKGEKPMGFALFSNAQFAIAAKDALQ
        A  PPPPP      +P PI   H    L  +    A DEVRT+F+ GLPEDVK RE+ NL R  PGYE S + +  G KP  FA+FS+ Q A+A   AL 
Subjt:  AAAPPPPPPQAASAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQV-NFKGEKPMGFALFSNAQFAIAAKDALQ

Query:  DMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYPVPPVPMPAPAPVPAP
         MVFD E  S LH ++AK N   KR    D   ++  K+L++      +G+ S   F  P                 Y+  G  P     + A     AP
Subjt:  DMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYPVPPVPMPAPAPVPAP

Query:  SSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSS--GSVGMRIQY
        +S  P   +K   PC TLFI N+G N  E EL  +FS   GF ++KI       V F++F+DV+ ++   H+LQG V+ SS  G V +R+QY
Subjt:  SSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSS--GSVGMRIQY

AT2G42240.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.2e-2938Show/hide
Query:  AAAPPPPPPQAASAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQV-NFKGEKPMGFALFSNAQFAIAAKDALQ
        A  PPPPP      +P PI   H    L  +    A DEVRT+F+ GLPEDVK RE+ NL R  PGYE S + +  G KP  FA+FS+ Q A+A   AL 
Subjt:  AAAPPPPPPQAASAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQV-NFKGEKPMGFALFSNAQFAIAAKDALQ

Query:  DMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYPVPPVPMPAPAPVPAP
         MVFD E  S LH ++AK N   KR    D   ++  K+L++      +G+ S   F  P                 Y+  G  P     + A     AP
Subjt:  DMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYPVPPVPMPAPAPVPAP

Query:  SSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSS--GSVGMRIQYPFFYQIVF
        +S  P   +K   PC TLFI N+G N  E EL  +FS   GF ++KI       V F++F+DV+ ++   H+LQG V+ SS  G V +R+QYP    I+F
Subjt:  SSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSS--GSVGMRIQYPFFYQIVF

AT2G42240.3 RNA-binding (RRM/RBD/RNP motifs) family protein5.1e-2837.72Show/hide
Query:  AAAPPPPPPQAASAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQV-NFKGEKPMGFALFSNAQFAIAAKDALQ
        A  PPPPP      +P PI   H    L  +    A DEVRT+F+ GLPEDVK RE+ NL R  PGYE S + +  G KP  FA+FS+ Q A+A   AL 
Subjt:  AAAPPPPPPQAASAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQV-NFKGEKPMGFALFSNAQFAIAAKDALQ

Query:  DMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYPVPPVPMPAPAPVPAP
         MVFD E  S LH ++AK N   KR    D   ++  K+L++      +G+ S   F  P                 Y+  G  P     + A     AP
Subjt:  DMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYPVPPVPMPAPAPVPAP

Query:  SSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSS
        +S  P   +K   PC TLFI N+G N  E EL  +FS   GF ++KI       V F++F+DV+ ++   H+LQG V+ SS
Subjt:  SSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSS

AT3G13700.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.4e-2231.67Show/hide
Query:  PHPHPPQ--ILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNF--KGEKPMGFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEM
        PH  PPQ  +L D PG      + T+F++GLP DVK RE+ NL R   G+E+ Q+ +  +G++ + FA F++ +FA+AA + L  + FD ++ S LH E+
Subjt:  PHPHPPQ--ILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNF--KGEKPMGFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEM

Query:  AKKNLFVKR--GIVADASVYDQSKRL-RTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYPVPPVPMPAPAPVPAPSSYVPVQNTKDN-
        A+ N   K   G      + +++K + ++  D +  G S P     P           +  P   D             +     APS+   ++   +  
Subjt:  AKKNLFVKR--GIVADASVYDQSKRL-RTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYPVPPVPMPAPAPVPAPSSYVPVQNTKDN-

Query:  ---PPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVGMRIQY
             C+TLFI NLG N  E+EL+ L S  PGF  +KI  +    V F +FE++  AT+  + LQG ++ SS   GM I+Y
Subjt:  ---PPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVGMRIQY

AT3G21215.1 RNA-binding (RRM/RBD/RNP motifs) family protein7.4e-13680.06Show/hide
Query:  MAGTGIHPYHQQWPATAAAAPPPPPPQAASAAPPPIP----HPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKP
        MAG GIHPYHQQWP   A   PPPP   +SAAPP  P    HP PP +LVDN  R   DE+RTIFI GLP+DVKEREL NLLRWLPGYEASQVNFKGEKP
Subjt:  MAGTGIHPYHQQWPATAAAAPPPPPPQAASAAPPPIP----HPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKP

Query:  MGFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWG-PHGYMAPPPPPYD
        MGFALFS AQFA+AAKD LQ MVFDAESKSV+HTEMAKKNLFVKRGIV D++ YDQSKRLRTGGD  H+ Y SPSPFH PPPP+WG PHGYMAP PPPYD
Subjt:  MGFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWG-PHGYMAPPPPPYD

Query:  PYGGYPVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIP
        PY GY  PPVPMP P P+ APSSYVPVQN KDNPPCNTLFIGNLGEN+NEEELR L S QPGFKQMKILRQERHTVCFIEFEDVN+ATNVHH+LQGAVIP
Subjt:  PYGGYPVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIP

Query:  SSGSVGMRIQY
        SSGS+GMRIQY
Subjt:  SSGSVGMRIQY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGTACTGGAATCCACCCGTACCACCAGCAATGGCCTGCCACCGCCGCCGCCGCCCCTCCTCCTCCTCCTCCACAAGCCGCTTCCGCTGCTCCCCCTCCTATTCC
CCACCCCCATCCACCTCAGATCCTCGTCGACAACCCCGGCCGCCATGCCTCTGATGAGGTTCGAACTATATTTATAACAGGGCTTCCTGAAGATGTAAAAGAGAGAGAGC
TACAGAATCTTCTCAGATGGTTACCTGGTTACGAGGCTTCACAAGTGAATTTCAAAGGTGAAAAGCCTATGGGCTTTGCGCTCTTCTCCAATGCCCAGTTTGCTATTGCT
GCGAAAGATGCCCTCCAGGATATGGTTTTTGATGCGGAGTCTAAGTCAGTGTTGCATACTGAGATGGCCAAGAAAAATCTATTTGTTAAACGAGGCATTGTTGCTGATGC
GAGTGTTTACGACCAAAGTAAGCGATTGAGAACAGGTGGTGACTATGCCCACACTGGATATTCAAGTCCATCACCTTTTCATGCCCCTCCACCCCCTATTTGGGGGCCTC
ATGGGTATATGGCTCCACCACCTCCTCCATATGATCCTTATGGAGGTTACCCCGTTCCTCCTGTACCTATGCCTGCTCCTGCTCCTGTACCAGCACCTAGCAGCTATGTG
CCTGTTCAGAACACTAAAGATAATCCTCCTTGCAACACCCTGTTTATTGGCAATCTAGGGGAAAATGTAAATGAGGAGGAACTCAGAGGTCTTTTTAGCGTACAACCTGG
ATTTAAGCAAATGAAGATTCTGAGGCAGGAAAGGCACACGGTCTGCTTCATTGAGTTTGAAGACGTGAATAATGCCACCAATGTGCATCATAGTTTGCAGGGTGCTGTTA
TCCCTAGTTCCGGCTCTGTGGGCATGAGAATACAATATCCTTTTTTTTATCAAATTGTTTTTTTTATGTTAGCCGCAGAACGATATTACCTATTCTACTGGTACTTGAAA
ATTGGAAGTTGTTGCCTGACAATCTATGTGTTGGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGGTACTGGAATCCACCCGTACCACCAGCAATGGCCTGCCACCGCCGCCGCCGCCCCTCCTCCTCCTCCTCCACAAGCCGCTTCCGCTGCTCCCCCTCCTATTCC
CCACCCCCATCCACCTCAGATCCTCGTCGACAACCCCGGCCGCCATGCCTCTGATGAGGTTCGAACTATATTTATAACAGGGCTTCCTGAAGATGTAAAAGAGAGAGAGC
TACAGAATCTTCTCAGATGGTTACCTGGTTACGAGGCTTCACAAGTGAATTTCAAAGGTGAAAAGCCTATGGGCTTTGCGCTCTTCTCCAATGCCCAGTTTGCTATTGCT
GCGAAAGATGCCCTCCAGGATATGGTTTTTGATGCGGAGTCTAAGTCAGTGTTGCATACTGAGATGGCCAAGAAAAATCTATTTGTTAAACGAGGCATTGTTGCTGATGC
GAGTGTTTACGACCAAAGTAAGCGATTGAGAACAGGTGGTGACTATGCCCACACTGGATATTCAAGTCCATCACCTTTTCATGCCCCTCCACCCCCTATTTGGGGGCCTC
ATGGGTATATGGCTCCACCACCTCCTCCATATGATCCTTATGGAGGTTACCCCGTTCCTCCTGTACCTATGCCTGCTCCTGCTCCTGTACCAGCACCTAGCAGCTATGTG
CCTGTTCAGAACACTAAAGATAATCCTCCTTGCAACACCCTGTTTATTGGCAATCTAGGGGAAAATGTAAATGAGGAGGAACTCAGAGGTCTTTTTAGCGTACAACCTGG
ATTTAAGCAAATGAAGATTCTGAGGCAGGAAAGGCACACGGTCTGCTTCATTGAGTTTGAAGACGTGAATAATGCCACCAATGTGCATCATAGTTTGCAGGGTGCTGTTA
TCCCTAGTTCCGGCTCTGTGGGCATGAGAATACAATATCCTTTTTTTTATCAAATTGTTTTTTTTATGTTAGCCGCAGAACGATATTACCTATTCTACTGGTACTTGAAA
ATTGGAAGTTGTTGCCTGACAATCTATGTGTTGGAGTGA
Protein sequenceShow/hide protein sequence
MAGTGIHPYHQQWPATAAAAPPPPPPQAASAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIA
AKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYPVPPVPMPAPAPVPAPSSYV
PVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVGMRIQYPFFYQIVFFMLAAERYYLFYWYLK
IGSCCLTIYVLE