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CSPI07G22610 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G22610
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationChr7:19131511..19132212
RNA-Seq ExpressionCSPI07G22610
SyntenyCSPI07G22610
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR044675 - E3 ubiquitin-protein ligase RING1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU28792.1 hypothetical protein TSUD_357780 [Trifolium subterraneum]2.9e-1638.36Show/hide
Query:  LFICSGIAIICSLSIAVLFFNLTMILGWFNCCCRSPEM-TNVKNIKYEDSNLMKIS----TIMYKKENKSEETNITSECALCLSPYEDEECIRELLACNH
        +++  GI II S+ IA +FF LTM  GW N     P + T + +   + S  M +     T MYK+ + +++    +EC +CL+ ++++E +R+L +C H
Subjt:  LFICSGIAIICSLSIAVLFFNLTMILGWFNCCCRSPEM-TNVKNIKYEDSNLMKIS----TIMYKKENKSEETNITSECALCLSPYEDEECIRELLACNH

Query:  VFHASCIDVWLYSHSNCPLCRTPLGRVACINGELTSG-VVVAISNS
        VFH SCID WL SHS CPLCR+ + +V   N  L +  ++VAI +S
Subjt:  VFHASCIDVWLYSHSNCPLCRTPLGRVACINGELTSG-VVVAISNS

KAA0059407.1 E3 ubiquitin-protein ligase RING1-like [Cucumis melo var. makuwa]1.8e-9076.79Show/hide
Query:  MTQFSCRFMKMINTWKAGTIAKFVNSSIRFAVHCFRTAAASLYNCYGSARHLRAPNLLNIAFNFTSLPFRMSVLFICSGIAIICSLSIAVLFFNLTMILG
        M QF CRFMK I+TW+AG IAKFVN+S R AVHCF TAAASL NCY SA+HLRAPNL     +   LP  MSVLFICSG+AI+CSL IA+LFFNL M LG
Subjt:  MTQFSCRFMKMINTWKAGTIAKFVNSSIRFAVHCFRTAAASLYNCYGSARHLRAPNLLNIAFNFTSLPFRMSVLFICSGIAIICSLSIAVLFFNLTMILG

Query:  WFNCCCRSPEMTNVKNIKYEDSNLMKISTIMYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCRTPLGRVACING
        WFNCCCRSPEMT+VKNIKYEDSNL+KISTIMYKKENKSEETNI SECALCLSP ED ECIR+LLACNHVFHASCIDVWLYSHSNCPLCRT L  VAC NG
Subjt:  WFNCCCRSPEMTNVKNIKYEDSNLMKISTIMYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCRTPLGRVACING

Query:  ELTSGV----VVAISNSLQIETSTHGSQREASPENMV
        ELTSGV    VV I+NSLQI  S H S+R +  ENMV
Subjt:  ELTSGV----VVAISNSLQIETSTHGSQREASPENMV

KAE8646506.1 hypothetical protein Csa_015876 [Cucumis sativus]8.8e-9897.83Show/hide
Query:  RHLRAPNLLNIAFNFTSLPFRMSVLFICSGIAIICSLSIAVLFFNLTMILGWFNCCCRSPEMTNVKNIKYEDSNLMKISTIMYKKENKSEETNITSECAL
        RHLRAPNLLNIAFNFTS PFRMSVLFICSGIAIICSLSIA+LFFNLTMILGWFNCCCRSPEMTNVKNIKYEDSNLMKISTIMYKKENKSEETNITSECAL
Subjt:  RHLRAPNLLNIAFNFTSLPFRMSVLFICSGIAIICSLSIAVLFFNLTMILGWFNCCCRSPEMTNVKNIKYEDSNLMKISTIMYKKENKSEETNITSECAL

Query:  CLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCRTPLGRVACINGELTSGVVVAISNSLQIETSTHGSQREASPENMV
        CLSPYED ECIRELLACNHVFHASCID+WLYSHSNCPLCRTPLGRVACINGELTSGVVVAISNSLQIETSTHGSQREASPENMV
Subjt:  CLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCRTPLGRVACINGELTSGVVVAISNSLQIETSTHGSQREASPENMV

KAG7013994.1 E3 ubiquitin-protein ligase ATL6, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-5067.07Show/hide
Query:  MSVLFICSGIAIICSLSIAVLFFNLTMILGWFNCCCRSPEMT-NVKNIKYEDSNLMKISTIMYKKENKSEETNITSECALCLSPYEDEECIRELLACNHV
        MSV FICSGIAIICSL I++ FF+LT ILGWFNCCC SP  T +V+NIK E S++M+I T+ YKKEN++EETN  SEC LCLSP+ED ECIR+L +CNHV
Subjt:  MSVLFICSGIAIICSLSIAVLFFNLTMILGWFNCCCRSPEMT-NVKNIKYEDSNLMKISTIMYKKENKSEETNITSECALCLSPYEDEECIRELLACNHV

Query:  FHASCIDVWLYSHSNCPLCRTPLGRVACINGELTSGVVVAISNSLQIETSTHGSQREASPENMV
        FHASCIDVWL SHS CPLCRTP+  VAC   E     VV I NSLQIE S H  + +A PENMV
Subjt:  FHASCIDVWLYSHSNCPLCRTPLGRVACINGELTSGVVVAISNSLQIETSTHGSQREASPENMV

PNX96352.1 RING-H2 finger protein ATL52-like [Trifolium pratense]1.9e-1539.04Show/hide
Query:  LFICSGIAIICSLSIAVLFFNLTMILGWFNCCCRSPEM-TNVKNIKYEDSNLMKIS----TIMYKKENKSEETNITSECALCLSPYEDEECIRELLACNH
        +++  GI II S+ IA + F LTM  GW +     P + T V +   + S  M +     T MYK+ + +E+    +EC +CLS ++++E +R+L +C H
Subjt:  LFICSGIAIICSLSIAVLFFNLTMILGWFNCCCRSPEM-TNVKNIKYEDSNLMKIS----TIMYKKENKSEETNITSECALCLSPYEDEECIRELLACNH

Query:  VFHASCIDVWLYSHSNCPLCRTPLGRVACINGELTSG-VVVAISNS
        VFH SCID WL SHS CPLCR+ + +V   N  L +   +VAI +S
Subjt:  VFHASCIDVWLYSHSNCPLCRTPLGRVACINGELTSG-VVVAISNS

TrEMBL top hitse value%identityAlignment
A0A0A0KAX6 RING-type E3 ubiquitin transferase6.4e-8698.16Show/hide
Query:  MSVLFICSGIAIICSLSIAVLFFNLTMILGWFNCCCRSPEMTNVKNIKYEDSNLMKISTIMYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVF
        MSVLFICSGIAIICSLSIA+LFFNLTMILGWFNCCCRSPEMTNVKNIKYEDSNLMKISTIMYKKENKSEETNITSECALCLSPYED ECIRELLACNHVF
Subjt:  MSVLFICSGIAIICSLSIAVLFFNLTMILGWFNCCCRSPEMTNVKNIKYEDSNLMKISTIMYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVF

Query:  HASCIDVWLYSHSNCPLCRTPLGRVACINGELTSGVVVAISNSLQIETSTHGSQREASPENMV
        HASCID+WLYSHSNCPLCRTPLGRVACINGELTSGVVVAISNSLQIETSTHGSQREASPENMV
Subjt:  HASCIDVWLYSHSNCPLCRTPLGRVACINGELTSGVVVAISNSLQIETSTHGSQREASPENMV

A0A2K3N066 RING-type E3 ubiquitin transferase9.1e-1639.04Show/hide
Query:  LFICSGIAIICSLSIAVLFFNLTMILGWFNCCCRSPEM-TNVKNIKYEDSNLMKIS----TIMYKKENKSEETNITSECALCLSPYEDEECIRELLACNH
        +++  GI II S+ IA + F LTM  GW +     P + T V +   + S  M +     T MYK+ + +E+    +EC +CLS ++++E +R+L +C H
Subjt:  LFICSGIAIICSLSIAVLFFNLTMILGWFNCCCRSPEM-TNVKNIKYEDSNLMKIS----TIMYKKENKSEETNITSECALCLSPYEDEECIRELLACNH

Query:  VFHASCIDVWLYSHSNCPLCRTPLGRVACINGELTSG-VVVAISNS
        VFH SCID WL SHS CPLCR+ + +V   N  L +   +VAI +S
Subjt:  VFHASCIDVWLYSHSNCPLCRTPLGRVACINGELTSG-VVVAISNS

A0A2N9J1M7 RING-type E3 ubiquitin transferase3.0e-1942.25Show/hide
Query:  GIAIICSLSIAVLFFNLTM-ILGWFNCCCRSPEMTN-VKNIKYEDSNL--MKISTIMYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASC
        GI +I S+ IA++F+NL M +L  +      P     VK   ++ S L  + ++T  YKK  ++ E    +EC +CLS +ED+EC+  L  C H FH  C
Subjt:  GIAIICSLSIAVLFFNLTM-ILGWFNCCCRSPEMTN-VKNIKYEDSNL--MKISTIMYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASC

Query:  IDVWLYSHSNCPLCRTPLGRVACING-----ELTSGVVVAIS
        ID+WLYSHS+CPLCRTP+ R++  NG     E T  V+V IS
Subjt:  IDVWLYSHSNCPLCRTPLGRVACING-----ELTSGVVVAIS

A0A2Z6MV30 RING-type E3 ubiquitin transferase1.4e-1638.36Show/hide
Query:  LFICSGIAIICSLSIAVLFFNLTMILGWFNCCCRSPEM-TNVKNIKYEDSNLMKIS----TIMYKKENKSEETNITSECALCLSPYEDEECIRELLACNH
        +++  GI II S+ IA +FF LTM  GW N     P + T + +   + S  M +     T MYK+ + +++    +EC +CL+ ++++E +R+L +C H
Subjt:  LFICSGIAIICSLSIAVLFFNLTMILGWFNCCCRSPEM-TNVKNIKYEDSNLMKIS----TIMYKKENKSEETNITSECALCLSPYEDEECIRELLACNH

Query:  VFHASCIDVWLYSHSNCPLCRTPLGRVACINGELTSG-VVVAISNS
        VFH SCID WL SHS CPLCR+ + +V   N  L +  ++VAI +S
Subjt:  VFHASCIDVWLYSHSNCPLCRTPLGRVACINGELTSG-VVVAISNS

A0A5D3BXP3 RING-type E3 ubiquitin transferase8.6e-9176.79Show/hide
Query:  MTQFSCRFMKMINTWKAGTIAKFVNSSIRFAVHCFRTAAASLYNCYGSARHLRAPNLLNIAFNFTSLPFRMSVLFICSGIAIICSLSIAVLFFNLTMILG
        M QF CRFMK I+TW+AG IAKFVN+S R AVHCF TAAASL NCY SA+HLRAPNL     +   LP  MSVLFICSG+AI+CSL IA+LFFNL M LG
Subjt:  MTQFSCRFMKMINTWKAGTIAKFVNSSIRFAVHCFRTAAASLYNCYGSARHLRAPNLLNIAFNFTSLPFRMSVLFICSGIAIICSLSIAVLFFNLTMILG

Query:  WFNCCCRSPEMTNVKNIKYEDSNLMKISTIMYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCRTPLGRVACING
        WFNCCCRSPEMT+VKNIKYEDSNL+KISTIMYKKENKSEETNI SECALCLSP ED ECIR+LLACNHVFHASCIDVWLYSHSNCPLCRT L  VAC NG
Subjt:  WFNCCCRSPEMTNVKNIKYEDSNLMKISTIMYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCRTPLGRVACING

Query:  ELTSGV----VVAISNSLQIETSTHGSQREASPENMV
        ELTSGV    VV I+NSLQI  S H S+R +  ENMV
Subjt:  ELTSGV----VVAISNSLQIETSTHGSQREASPENMV

SwissProt top hitse value%identityAlignment
Q8W571 RING-H2 finger protein ATL323.4e-1243.59Show/hide
Query:  YKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCRTPLGRVACINGELTSGVVVA
        Y    +S+  +   ECA+CL+  ED E +R L  CNH+FH  CID WLYSH+ CP+CR+ L   +   G+   GV +A
Subjt:  YKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCRTPLGRVACINGELTSGVVVA

Q9LF64 RING-H2 finger protein ATL523.4e-1250Show/hide
Query:  SECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCR---TPLGRVACINGELTSGVVVAISNS
        S+C++CLS +E+ E +R L  CNH FH  CID WL SHSNCPLCR   T +       G+  S VV   SNS
Subjt:  SECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCR---TPLGRVACINGELTSGVVVAISNS

Q9LSW9 RING-H2 finger protein ATL161.2e-1247.76Show/hide
Query:  MYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCRTPLGRVAC
        ++  E + EE   + EC++CLS ++DEE +R +  C+H+FH  CIDVWL +++NCPLCRT   RV+C
Subjt:  MYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCRTPLGRVAC

Q9LUZ9 RING-H2 finger protein ATL634.5e-1233.33Show/hide
Query:  LGWFNCCCRSPEMTNVKNIKYEDSNLMKISTIMYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCRTPLGRVACI
        LG F+    SP  T  ++ K  DS+++    +   +EN+ EE     EC +CL  +E  +  R+L  C H FH  CID+WL SHS CPLCR+P       
Subjt:  LGWFNCCCRSPEMTNVKNIKYEDSNLMKISTIMYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCRTPLGRVACI

Query:  NGELTSGVVVAISNSLQIETSTHGSQREA
               V+ A+S+   ++ + +  + EA
Subjt:  NGELTSGVVVAISNSLQIETSTHGSQREA

Q9SRQ8 RING-H2 finger protein ATL512.6e-1238.54Show/hide
Query:  EDSNLMKISTIMYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCRTPLGRVACIN-GELTSGVVVAISNSL
        ++S +  I+   Y+K +   E   +S+C++CLS +++ E +R L  CNH FH  CID WL SHSNCPLCR  +   + +   +LT+  +V  +NS+
Subjt:  EDSNLMKISTIMYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCRTPLGRVACIN-GELTSGVVVAISNSL

Arabidopsis top hitse value%identityAlignment
AT3G03550.1 RING/U-box superfamily protein1.9e-1338.54Show/hide
Query:  EDSNLMKISTIMYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCRTPLGRVACIN-GELTSGVVVAISNSL
        ++S +  I+   Y+K +   E   +S+C++CLS +++ E +R L  CNH FH  CID WL SHSNCPLCR  +   + +   +LT+  +V  +NS+
Subjt:  EDSNLMKISTIMYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCRTPLGRVACIN-GELTSGVVVAISNSL

AT4G40070.1 RING/U-box superfamily protein2.4e-1343.59Show/hide
Query:  YKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCRTPLGRVACINGELTSGVVVA
        Y    +S+  +   ECA+CL+  ED E +R L  CNH+FH  CID WLYSH+ CP+CR+ L   +   G+   GV +A
Subjt:  YKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCRTPLGRVACINGELTSGVVVA

AT5G17600.1 RING/U-box superfamily protein2.4e-1350Show/hide
Query:  SECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCR---TPLGRVACINGELTSGVVVAISNS
        S+C++CLS +E+ E +R L  CNH FH  CID WL SHSNCPLCR   T +       G+  S VV   SNS
Subjt:  SECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCR---TPLGRVACINGELTSGVVVAISNS

AT5G43420.1 RING/U-box superfamily protein8.4e-1447.76Show/hide
Query:  MYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCRTPLGRVAC
        ++  E + EE   + EC++CLS ++DEE +R +  C+H+FH  CIDVWL +++NCPLCRT   RV+C
Subjt:  MYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCRTPLGRVAC

AT5G58580.1 TOXICOS EN LEVADURA 633.2e-1333.33Show/hide
Query:  LGWFNCCCRSPEMTNVKNIKYEDSNLMKISTIMYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCRTPLGRVACI
        LG F+    SP  T  ++ K  DS+++    +   +EN+ EE     EC +CL  +E  +  R+L  C H FH  CID+WL SHS CPLCR+P       
Subjt:  LGWFNCCCRSPEMTNVKNIKYEDSNLMKISTIMYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCRTPLGRVACI

Query:  NGELTSGVVVAISNSLQIETSTHGSQREA
               V+ A+S+   ++ + +  + EA
Subjt:  NGELTSGVVVAISNSLQIETSTHGSQREA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCAGTTCTCATGTCGTTTTATGAAGATGATTAATACCTGGAAGGCTGGAACAATTGCCAAATTTGTAAATTCGTCCATAAGATTTGCCGTTCATTGTTTTCGTAC
AGCTGCAGCATCTTTATACAATTGCTATGGTTCAGCACGACACTTAAGGGCTCCGAATTTGCTGAATATTGCATTCAATTTTACTTCCTTACCATTCCGTATGTCTGTTC
TCTTCATCTGCTCCGGCATTGCCATCATTTGCTCGCTGTCTATAGCCGTCTTGTTCTTCAACCTTACGATGATACTGGGATGGTTTAATTGCTGTTGCCGTTCGCCTGAG
ATGACTAACGTTAAGAATATTAAATATGAAGACTCAAATCTTATGAAGATCTCAACTATCATGTACAAGAAAGAAAACAAGAGTGAAGAAACTAATATTACAAGTGAATG
TGCTTTGTGCTTGTCACCTTATGAAGATGAGGAATGCATACGGGAGCTTCTTGCCTGCAACCATGTCTTTCATGCTTCATGTATCGACGTATGGCTGTATTCACATTCGA
ACTGCCCGCTCTGCCGGACTCCACTTGGCCGTGTAGCTTGTATTAATGGGGAGTTGACATCAGGGGTGGTAGTCGCCATTAGCAACAGTCTCCAGATTGAGACTTCTACT
CATGGAAGTCAGAGGGAGGCGTCACCTGAAAACATGGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTCAGTTCTCATGTCGTTTTATGAAGATGATTAATACCTGGAAGGCTGGAACAATTGCCAAATTTGTAAATTCGTCCATAAGATTTGCCGTTCATTGTTTTCGTAC
AGCTGCAGCATCTTTATACAATTGCTATGGTTCAGCACGACACTTAAGGGCTCCGAATTTGCTGAATATTGCATTCAATTTTACTTCCTTACCATTCCGTATGTCTGTTC
TCTTCATCTGCTCCGGCATTGCCATCATTTGCTCGCTGTCTATAGCCGTCTTGTTCTTCAACCTTACGATGATACTGGGATGGTTTAATTGCTGTTGCCGTTCGCCTGAG
ATGACTAACGTTAAGAATATTAAATATGAAGACTCAAATCTTATGAAGATCTCAACTATCATGTACAAGAAAGAAAACAAGAGTGAAGAAACTAATATTACAAGTGAATG
TGCTTTGTGCTTGTCACCTTATGAAGATGAGGAATGCATACGGGAGCTTCTTGCCTGCAACCATGTCTTTCATGCTTCATGTATCGACGTATGGCTGTATTCACATTCGA
ACTGCCCGCTCTGCCGGACTCCACTTGGCCGTGTAGCTTGTATTAATGGGGAGTTGACATCAGGGGTGGTAGTCGCCATTAGCAACAGTCTCCAGATTGAGACTTCTACT
CATGGAAGTCAGAGGGAGGCGTCACCTGAAAACATGGTTTAA
Protein sequenceShow/hide protein sequence
MTQFSCRFMKMINTWKAGTIAKFVNSSIRFAVHCFRTAAASLYNCYGSARHLRAPNLLNIAFNFTSLPFRMSVLFICSGIAIICSLSIAVLFFNLTMILGWFNCCCRSPE
MTNVKNIKYEDSNLMKISTIMYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCRTPLGRVACINGELTSGVVVAISNSLQIETST
HGSQREASPENMV