; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI07G22940 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G22940
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
Genome locationChr7:19365149..19368833
RNA-Seq ExpressionCSPI07G22940
SyntenyCSPI07G22940
Gene Ontology termsGO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059439.1 protein WHI4 [Cucumis melo var. makuwa]5.7e-14698.85Show/hide
Query:  MAHLPYDPYYLYNQPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
        MAH PYDPYYLYNQPDPTYS+RSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
Subjt:  MAHLPYDPYYLYNQPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI

Query:  ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPANAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
        ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPA+AISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
Subjt:  ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPANAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL

Query:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
        CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
Subjt:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS

XP_004141677.1 protein WHI4 [Cucumis sativus]1.0e-147100Show/hide
Query:  MAHLPYDPYYLYNQPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
        MAHLPYDPYYLYNQPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
Subjt:  MAHLPYDPYYLYNQPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI

Query:  ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPANAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
        ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPANAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
Subjt:  ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPANAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL

Query:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
        CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
Subjt:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS

XP_008462363.2 PREDICTED: LOW QUALITY PROTEIN: protein WHI4 [Cucumis melo]1.8e-14498.09Show/hide
Query:  MAHLPYDPYYLYNQPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
        MAH PYDPYYLYNQPDPTYS+RSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
Subjt:  MAHLPYDPYYLYNQPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI

Query:  ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPANAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
        ELARSNSRRKHKPGGGAYVVIDKRKK  ANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPA+AISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
Subjt:  ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPANAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL

Query:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
        CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
Subjt:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS

XP_023513427.1 U2 small nuclear ribonucleoprotein B'' 2 [Cucurbita pepo subsp. pepo]5.7e-13892.75Show/hide
Query:  MAHLPYDPYYLYNQPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
        MAH PYDPYYLY+QPD  YS+R+NINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
Subjt:  MAHLPYDPYYLYNQPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI

Query:  ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPANAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
        ELARSNSRRKHKPGGGAYVVIDKRKK+D+N+QETSS+DGGSEPDEPSKK +QSNEAVV P N +SAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
Subjt:  ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPANAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL

Query:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
         KYPGFNVLKLRAKSGMPVAFADFE+IEQASKVMEELQGS+LPSSDRGGMHIEYARSKMRKS
Subjt:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS

XP_038898771.1 protein WHI4 isoform X1 [Benincasa hispida]4.8e-14597.71Show/hide
Query:  MAHLPYDPYYLYNQPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
        MAH PYDPYYLYNQPDPTYS+RSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
Subjt:  MAHLPYDPYYLYNQPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI

Query:  ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPANAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
        ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKA+QS EA+VTPANA+SAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
Subjt:  ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPANAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL

Query:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
        CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
Subjt:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS

TrEMBL top hitse value%identityAlignment
A0A0A0K772 Uncharacterized protein5.0e-148100Show/hide
Query:  MAHLPYDPYYLYNQPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
        MAHLPYDPYYLYNQPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
Subjt:  MAHLPYDPYYLYNQPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI

Query:  ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPANAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
        ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPANAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
Subjt:  ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPANAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL

Query:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
        CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
Subjt:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS

A0A1S3CHB2 LOW QUALITY PROTEIN: protein WHI48.9e-14598.09Show/hide
Query:  MAHLPYDPYYLYNQPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
        MAH PYDPYYLYNQPDPTYS+RSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
Subjt:  MAHLPYDPYYLYNQPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI

Query:  ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPANAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
        ELARSNSRRKHKPGGGAYVVIDKRKK  ANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPA+AISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
Subjt:  ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPANAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL

Query:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
        CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
Subjt:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS

A0A5A7V0X3 Protein WHI42.8e-14698.85Show/hide
Query:  MAHLPYDPYYLYNQPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
        MAH PYDPYYLYNQPDPTYS+RSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
Subjt:  MAHLPYDPYYLYNQPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI

Query:  ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPANAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
        ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPA+AISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
Subjt:  ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPANAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL

Query:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
        CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
Subjt:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS

A0A6J1HI97 protein WHI46.2e-13892.37Show/hide
Query:  MAHLPYDPYYLYNQPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
        MAH PYDPYYLY+QPD  YS+R+NINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
Subjt:  MAHLPYDPYYLYNQPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI

Query:  ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPANAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
        ELARSNSRRKHKPGGGAYVVIDKRKK+D+N+QETSS+DGGSEPDEPSKK +QSNEAVV P N +SAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
Subjt:  ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPANAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL

Query:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
         KYPGFNVLKLRAKSGMPVAFADFE+IEQASKV+EELQGS+LPSSDRGGMHIEYARSKMRKS
Subjt:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS

A0A6J1KI66 U2 small nuclear ribonucleoprotein B'' 22.3e-13792.37Show/hide
Query:  MAHLPYDPYYLYNQPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
        MAH  YDPYYLY+QPD  YS+R+NINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
Subjt:  MAHLPYDPYYLYNQPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI

Query:  ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPANAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
        ELARSNSRRKHKPGGGAYVVIDKRKK+D+N+QETSS+DGGSEPDEPSKK +QSNEAVV P N +SAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
Subjt:  ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPANAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL

Query:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
         KYPGFNVLKLRAKSGMPVAFADFE+IEQASKVMEELQGS+LPSSDRGGMHIEYARSKMRKS
Subjt:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS

SwissProt top hitse value%identityAlignment
Q6DH13 RNA-binding protein, mRNA-processing factor 2a2.0e-1338.54Show/hide
Query:  NQPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSR
        ++ + + S    + TLF+SGLP D+K RE++ LFR   G++   +K T +  Q V F TF +   A  A +ALNG++FDP+S   L +E A++N++
Subjt:  NQPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSR

Q93062 RNA-binding protein with multiple splicing7.8e-1337.5Show/hide
Query:  NQPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSR
        N P     +   + TLF+SGLP D+K RE++ LFR   G++   +K T +  Q V F +F +   A  A +ALNG++FDP+    L +E A++N++
Subjt:  NQPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSR

Q9W6I1 RNA-binding protein with multiple splicing 21.3e-1241.67Show/hide
Query:  INTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSR
        + TLF+SGLP D+K RE++ LFR   G++   +K T +  Q V F TF +   A  A +ALNG++FDP++   L +E A++N++
Subjt:  INTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSR

Q9WVB0 RNA-binding protein with multiple splicing7.8e-1337.5Show/hide
Query:  NQPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSR
        N P     +   + TLF+SGLP D+K RE++ LFR   G++   +K T +  Q V F +F +   A  A +ALNG++FDP+    L +E A++N++
Subjt:  NQPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSR

Q9YGP5 RNA-binding protein with multiple splicing 23.5e-1342.86Show/hide
Query:  INTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSR
        + TLF+SGLP D+K RE++ LFR   G++   +K T +  Q V F TF N   A  A +ALNG++FDP++   L +E A++N++
Subjt:  INTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSR

Arabidopsis top hitse value%identityAlignment
AT2G42240.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.1e-4138.72Show/hide
Query:  AHLPYDPYYLYNQPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIE
        AH  Y P ++      +   R  + TLF++GLP+DVK REI+NLFR  PG+++  L+ +  G +  AFA F + QSAV  +HALNG+ FD +  S LHI+
Subjt:  AHLPYDPYYLYNQPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIE

Query:  LARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPAN-------AISAPYEHHEKNDGGPCSTLFIANLGPNCNED
        LA+SN + K       +  + K K     S  T+++ G      P   +   N    +PA        A  AP          PC TLFIAN+GPNC E 
Subjt:  LARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPAN-------AISAPYEHHEKNDGGPCSTLFIANLGPNCNED

Query:  ELKEVLCKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGG-MHIEYARSKM
        EL +V  +  GF  LK++   G PVAF DF+D+  +S+ +  LQG+VL SS  G  + ++YARS+M
Subjt:  ELKEVLCKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGG-MHIEYARSKM

AT2G42240.2 RNA-binding (RRM/RBD/RNP motifs) family protein8.5e-3938.58Show/hide
Query:  AHLPYDPYYLYNQPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIE
        AH  Y P ++      +   R  + TLF++GLP+DVK REI+NLFR  PG+++  L+ +  G +  AFA F + QSAV  +HALNG+ FD +  S LHI+
Subjt:  AHLPYDPYYLYNQPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIE

Query:  LARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPAN-------AISAPYEHHEKNDGGPCSTLFIANLGPNCNED
        LA+SN + K       +  + K K     S  T+++ G      P   +   N    +PA        A  AP          PC TLFIAN+GPNC E 
Subjt:  LARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPAN-------AISAPYEHHEKNDGGPCSTLFIANLGPNCNED

Query:  ELKEVLCKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRG
        EL +V  +  GF  LK++   G PVAF DF+D+  +S+ +  LQG+VL SS  G
Subjt:  ELKEVLCKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRG

AT2G42240.3 RNA-binding (RRM/RBD/RNP motifs) family protein1.0e-3938.2Show/hide
Query:  AHLPYDPYYLYNQPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIE
        AH  Y P ++      +   R  + TLF++GLP+DVK REI+NLFR  PG+++  L+ +  G +  AFA F + QSAV  +HALNG+ FD +  S LHI+
Subjt:  AHLPYDPYYLYNQPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIE

Query:  LARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPAN-------AISAPYEHHEKNDGGPCSTLFIANLGPNCNED
        LA+SN + K       +  + K K     S  T+++ G      P   +   N    +PA        A  AP          PC TLFIAN+GPNC E 
Subjt:  LARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPAN-------AISAPYEHHEKNDGGPCSTLFIANLGPNCNED

Query:  ELKEVLCKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRK
        EL +V  +  GF  LK++   G PVAF DF+D+  +S+ +  LQG+VL SS  G +    +R  MRK
Subjt:  ELKEVLCKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRK

AT3G13700.1 RNA-binding (RRM/RBD/RNP motifs) family protein5.8e-8055.63Show/hide
Query:  HLPYDPYYLYN----------QPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQ------------------VVAFATFYN
        H PYDP+Y+Y           Q      E   INTLF+SGLP+DVKAREIHNLFRRR GF+SCQLKYTGRG+Q                  VVAFATF +
Subjt:  HLPYDPYYLYN----------QPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQ------------------VVAFATFYN

Query:  HQSAVTALHALNGVKFDPQSGSVLHIELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDE---------PSKKAQQSNEAVVTPANAIS
        H+ A+ A++ LNGVKFDPQ+GS LHIELARSNSRRK +PG G YVVID R K  + SQ+  SD+G S+PDE         P +     +EA   P +   
Subjt:  HQSAVTALHALNGVKFDPQSGSVLHIELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDE---------PSKKAQQSNEAVVTPANAIS

Query:  APYEHHEK-NDGG----PCSTLFIANLGPNCNEDELKEVLCKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIE
        +   H EK ++GG     CSTLFIANLGPNC EDELK++L +YPGF++LK+RA+ GMPVAFADFE+IEQA+  M  LQG++L SSDRGGMHIE
Subjt:  APYEHHEK-NDGG----PCSTLFIANLGPNCNEDELKEVLCKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIE

AT3G13700.2 RNA-binding (RRM/RBD/RNP motifs) family protein5.8e-8860.42Show/hide
Query:  HLPYDPYYLYN----------QPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDP
        H PYDP+Y+Y           Q      E   INTLF+SGLP+DVKAREIHNLFRRR GF+SCQLKYTGRG+QVVAFATF +H+ A+ A++ LNGVKFDP
Subjt:  HLPYDPYYLYN----------QPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDP

Query:  QSGSVLHIELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDE---------PSKKAQQSNEAVVTPANAISAPYEHHEK-NDGG----P
        Q+GS LHIELARSNSRRK +PG G YVVID R K  + SQ+  SD+G S+PDE         P +     +EA   P +   +   H EK ++GG     
Subjt:  QSGSVLHIELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDE---------PSKKAQQSNEAVVTPANAISAPYEHHEK-NDGG----P

Query:  CSTLFIANLGPNCNEDELKEVLCKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRK
        CSTLFIANLGPNC EDELK++L +YPGF++LK+RA+ GMPVAFADFE+IEQA+  M  LQG++L SSDRGGMHIEYARSKMRK
Subjt:  CSTLFIANLGPNCNEDELKEVLCKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCACCTTCCTTACGATCCTTACTATCTCTATAATCAACCGGACCCGACCTACAGTGAACGGAGCAACATCAACACGCTCTTCATCTCTGGTCTCCCTGACGACGT
CAAGGCGCGCGAGATTCACAACCTTTTCCGCCGTCGCCCGGGGTTCGACTCTTGCCAGCTCAAGTACACTGGACGCGGCAATCAGGTTGTGGCATTTGCCACTTTTTACA
ATCACCAATCGGCTGTGACAGCGCTTCATGCATTAAATGGTGTCAAATTTGATCCACAAAGTGGATCGGTTCTGCATATTGAACTTGCTAGGTCAAATTCTAGGAGAAAG
CATAAGCCAGGTGGTGGAGCATATGTTGTGATAGATAAAAGGAAAAAAACCGATGCCAATTCTCAGGAAACATCAAGTGATGATGGAGGCAGTGAACCAGATGAACCATC
AAAAAAGGCCCAACAAAGCAACGAGGCTGTGGTGACTCCTGCTAATGCTATATCTGCTCCATATGAGCATCATGAAAAGAATGATGGAGGACCTTGCTCCACTTTGTTTA
TCGCAAATCTGGGTCCAAACTGCAATGAAGATGAACTGAAGGAAGTCTTGTGCAAATATCCTGGATTCAACGTTCTCAAATTGCGTGCCAAAAGTGGAATGCCCGTTGCA
TTTGCTGATTTTGAGGACATCGAACAAGCTAGCAAGGTTATGGAGGAGCTTCAGGGCAGCGTGCTACCTTCATCAGACCGTGGCGGCATGCATATAGAGTATGCTCGGTC
TAAAATGAGGAAGTCTTAG
mRNA sequenceShow/hide mRNA sequence
AAAATTGAAAAAGGAATCAATAAAATTTCGAAACTTATTGCTAAATGTTTCACTATATACGTATTTCCCGCTCGAGTAAGAAGGAACACACAAAACACAGTAGAACCTAA
ACTCCGCCGTGTTCGAAGTTAACACCAATCTCCGCCGTGAATTCCACCGGCTGATTCGCCGATGGCTCACCTTCCTTACGATCCTTACTATCTCTATAATCAACCGGACC
CGACCTACAGTGAACGGAGCAACATCAACACGCTCTTCATCTCTGGTCTCCCTGACGACGTCAAGGCGCGCGAGATTCACAACCTTTTCCGCCGTCGCCCGGGGTTCGAC
TCTTGCCAGCTCAAGTACACTGGACGCGGCAATCAGGTTGTGGCATTTGCCACTTTTTACAATCACCAATCGGCTGTGACAGCGCTTCATGCATTAAATGGTGTCAAATT
TGATCCACAAAGTGGATCGGTTCTGCATATTGAACTTGCTAGGTCAAATTCTAGGAGAAAGCATAAGCCAGGTGGTGGAGCATATGTTGTGATAGATAAAAGGAAAAAAA
CCGATGCCAATTCTCAGGAAACATCAAGTGATGATGGAGGCAGTGAACCAGATGAACCATCAAAAAAGGCCCAACAAAGCAACGAGGCTGTGGTGACTCCTGCTAATGCT
ATATCTGCTCCATATGAGCATCATGAAAAGAATGATGGAGGACCTTGCTCCACTTTGTTTATCGCAAATCTGGGTCCAAACTGCAATGAAGATGAACTGAAGGAAGTCTT
GTGCAAATATCCTGGATTCAACGTTCTCAAATTGCGTGCCAAAAGTGGAATGCCCGTTGCATTTGCTGATTTTGAGGACATCGAACAAGCTAGCAAGGTTATGGAGGAGC
TTCAGGGCAGCGTGCTACCTTCATCAGACCGTGGCGGCATGCATATAGAGTATGCTCGGTCTAAAATGAGGAAGTCTTAGCTGGAAAGCATTCATCAGTCTGGTAGGGAC
TCGTTTGCTGCTACTCTGAAGTTTTATTGCATTAATCAGTCTGGTATTGTTTCCGGTGCTTGCAAATTACGCATCATATCACTGCCTAAATAATGAAAATAGATCATGTC
ATCATGCACATCTTAGCTAAATTATATAGTAAAGTATTGT
Protein sequenceShow/hide protein sequence
MAHLPYDPYYLYNQPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSRRK
HKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPANAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVLCKYPGFNVLKLRAKSGMPVA
FADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS