; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI07G23340 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G23340
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionprotein SAWADEE HOMEODOMAIN HOMOLOG 1-like
Genome locationChr7:19647482..19651061
RNA-Seq ExpressionCSPI07G23340
SyntenyCSPI07G23340
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
GO:0003682 - chromatin binding (molecular function)
InterPro domainsIPR032001 - SAWADEE domain
IPR039276 - Protein SAWADEE HOMEODOMAIN HOMOLOG 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051041.1 protein SAWADEE HOMEODOMAIN-like protein 1-like isoform X2 [Cucumis melo var. makuwa]1.9e-14289.69Show/hide
Query:  MEHRKSSKLLDDSSFEFTLAE----IVEMDNILKDSRDQTLGQEFFQDVALHFSCSPWRAAKSPVTTEHVHAWFENRRKELRASSKKARPPPPPPSEPPP
        MEH KSSKLLDDSSFEFTLAE    IVEMDNILKDS DQTLGQEFFQDVALHFSCSPWRAAKSPVT EHVHAWFENRRKELR+SSKKARPP      PPP
Subjt:  MEHRKSSKLLDDSSFEFTLAE----IVEMDNILKDSRDQTLGQEFFQDVALHFSCSPWRAAKSPVTTEHVHAWFENRRKELRASSKKARPPPPPPSEPPP

Query:  PPPSELPPLPTPSSPPPSPPPKLLLYHSESDFLTHAPSSGPPEFKGKATDLSELAFEAFSSRDHAWYDVASFLTYRVNCHGELDARVRYAGFRKDEDEWV
        PPP ELP  P+PSSPPP+PPPKLLLYHSESDFLTHAPSS PPEF GKATDLSELAFEAFSSRDHAWYDVASFLTYR+NCHGELDARVRYAGF KDEDEWV
Subjt:  PPPSELPPLPTPSSPPPSPPPKLLLYHSESDFLTHAPSSGPPEFKGKATDLSELAFEAFSSRDHAWYDVASFLTYRVNCHGELDARVRYAGFRKDEDEWV

Query:  NVGRGVRDRSIPLESSECYRVKVGDLVLCFQERQDHALYFDAHVVEIQRRLHDISGCRCIFVVRYEHDRHEEKVHIGRLCCRPSAFNSDQI
        NV RGVRDRSIPLESSECYRVKVGDLVLCF+ERQDHALYFDA+VVEIQRRLHDI GCRCIFVVRYEHD +EEKVHIGRLCCRPSAFNSD+I
Subjt:  NVGRGVRDRSIPLESSECYRVKVGDLVLCFQERQDHALYFDAHVVEIQRRLHDISGCRCIFVVRYEHDRHEEKVHIGRLCCRPSAFNSDQI

XP_004141662.1 protein SAWADEE HOMEODOMAIN HOMOLOG 1 [Cucumis sativus]3.6e-162100Show/hide
Query:  MEHRKSSKLLDDSSFEFTLAEIVEMDNILKDSRDQTLGQEFFQDVALHFSCSPWRAAKSPVTTEHVHAWFENRRKELRASSKKARPPPPPPSEPPPPPPS
        MEHRKSSKLLDDSSFEFTLAEIVEMDNILKDSRDQTLGQEFFQDVALHFSCSPWRAAKSPVTTEHVHAWFENRRKELRASSKKARPPPPPPSEPPPPPPS
Subjt:  MEHRKSSKLLDDSSFEFTLAEIVEMDNILKDSRDQTLGQEFFQDVALHFSCSPWRAAKSPVTTEHVHAWFENRRKELRASSKKARPPPPPPSEPPPPPPS

Query:  ELPPLPTPSSPPPSPPPKLLLYHSESDFLTHAPSSGPPEFKGKATDLSELAFEAFSSRDHAWYDVASFLTYRVNCHGELDARVRYAGFRKDEDEWVNVGR
        ELPPLPTPSSPPPSPPPKLLLYHSESDFLTHAPSSGPPEFKGKATDLSELAFEAFSSRDHAWYDVASFLTYRVNCHGELDARVRYAGFRKDEDEWVNVGR
Subjt:  ELPPLPTPSSPPPSPPPKLLLYHSESDFLTHAPSSGPPEFKGKATDLSELAFEAFSSRDHAWYDVASFLTYRVNCHGELDARVRYAGFRKDEDEWVNVGR

Query:  GVRDRSIPLESSECYRVKVGDLVLCFQERQDHALYFDAHVVEIQRRLHDISGCRCIFVVRYEHDRHEEKVHIGRLCCRPSAFNSDQI
        GVRDRSIPLESSECYRVKVGDLVLCFQERQDHALYFDAHVVEIQRRLHDISGCRCIFVVRYEHDRHEEKVHIGRLCCRPSAFNSDQI
Subjt:  GVRDRSIPLESSECYRVKVGDLVLCFQERQDHALYFDAHVVEIQRRLHDISGCRCIFVVRYEHDRHEEKVHIGRLCCRPSAFNSDQI

XP_008462434.1 PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X1 [Cucumis melo]1.8e-13284.64Show/hide
Query:  MEHRKSSKLLDDSSFEFTLAEIVEMDNILKDSRDQTLGQEFFQDVALHFSCSPWRAAKSPVTTEHVHAWFENRRKELRASSKKARPPPPPPSEPPPPPPS
        MEH KSSKLLDDSSFEFTLAEIVEMDNILKDS DQTLGQEFFQDVALHFSCSPWRAAKSPVT EHVHAWFENRRKELR+SSKKARPP      PPPPPP 
Subjt:  MEHRKSSKLLDDSSFEFTLAEIVEMDNILKDSRDQTLGQEFFQDVALHFSCSPWRAAKSPVTTEHVHAWFENRRKELRASSKKARPPPPPPSEPPPPPPS

Query:  ELPPLPTPSSPPPSPPPKLLLYHSESDFLTHAPSSGPPEFKGKATDLSELAFEAFSSRDHAWYDV------ASFLTYRVNCHGELDARVRYAGFRKDEDE
        ELP  P+PSSPPP+PPPKLLLYHSESDFLTHAPSS PPEF GKATDLSELAFEAFSSRDHAW  +       S + Y     G+ DARVRYAGF KDEDE
Subjt:  ELPPLPTPSSPPPSPPPKLLLYHSESDFLTHAPSSGPPEFKGKATDLSELAFEAFSSRDHAWYDV------ASFLTYRVNCHGELDARVRYAGFRKDEDE

Query:  WVNVGRGVRDRSIPLESSECYRVKVGDLVLCFQERQDHALYFDAHVVEIQRRLHDISGCRCIFVVRYEHDRHEEKVHIGRLCCRPSAFNSDQI
        WVNV RGVRDRSIPLESSECYRVKVGDLVLCF+ERQDHALYFDA+VVEIQRRLHDI GCRCIFVVRYEHD +EEKVHIGRLCCRPSAFNSD+I
Subjt:  WVNVGRGVRDRSIPLESSECYRVKVGDLVLCFQERQDHALYFDAHVVEIQRRLHDISGCRCIFVVRYEHDRHEEKVHIGRLCCRPSAFNSDQI

XP_008462435.1 PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X2 [Cucumis melo]3.4e-14490.94Show/hide
Query:  MEHRKSSKLLDDSSFEFTLAEIVEMDNILKDSRDQTLGQEFFQDVALHFSCSPWRAAKSPVTTEHVHAWFENRRKELRASSKKARPPPPPPSEPPPPPPS
        MEH KSSKLLDDSSFEFTLAEIVEMDNILKDS DQTLGQEFFQDVALHFSCSPWRAAKSPVT EHVHAWFENRRKELR+SSKKARPP      PPPPPP 
Subjt:  MEHRKSSKLLDDSSFEFTLAEIVEMDNILKDSRDQTLGQEFFQDVALHFSCSPWRAAKSPVTTEHVHAWFENRRKELRASSKKARPPPPPPSEPPPPPPS

Query:  ELPPLPTPSSPPPSPPPKLLLYHSESDFLTHAPSSGPPEFKGKATDLSELAFEAFSSRDHAWYDVASFLTYRVNCHGELDARVRYAGFRKDEDEWVNVGR
        ELP  P+PSSPPP+PPPKLLLYHSESDFLTHAPSS PPEF GKATDLSELAFEAFSSRDHAWYDVASFLTYR+NCHGELDARVRYAGF KDEDEWVNV R
Subjt:  ELPPLPTPSSPPPSPPPKLLLYHSESDFLTHAPSSGPPEFKGKATDLSELAFEAFSSRDHAWYDVASFLTYRVNCHGELDARVRYAGFRKDEDEWVNVGR

Query:  GVRDRSIPLESSECYRVKVGDLVLCFQERQDHALYFDAHVVEIQRRLHDISGCRCIFVVRYEHDRHEEKVHIGRLCCRPSAFNSDQI
        GVRDRSIPLESSECYRVKVGDLVLCF+ERQDHALYFDA+VVEIQRRLHDI GCRCIFVVRYEHD +EEKVHIGRLCCRPSAFNSD+I
Subjt:  GVRDRSIPLESSECYRVKVGDLVLCFQERQDHALYFDAHVVEIQRRLHDISGCRCIFVVRYEHDRHEEKVHIGRLCCRPSAFNSDQI

XP_038897963.1 protein SAWADEE HOMEODOMAIN HOMOLOG 1-like [Benincasa hispida]4.6e-13383.62Show/hide
Query:  MEHRKSSKLLDDSSFEFTLAEIVEMDNILKDSRDQTLGQEFFQDVALHFSCSPWRAAKSPVTTEHVHAWFENRRKELRASSKKARPPPPPPSEPPPPPPS
        M++R SS +LDDS FEFTLAEIVEMDNILKDS DQTLGQEFFQDVALHFSCSPWRA KSPVT E VH WFENR+ EL  S KKARPPPPPP  PPP P  
Subjt:  MEHRKSSKLLDDSSFEFTLAEIVEMDNILKDSRDQTLGQEFFQDVALHFSCSPWRAAKSPVTTEHVHAWFENRRKELRASSKKARPPPPPPSEPPPPPPS

Query:  ELPPLPTPSSPPPSPPPKLLLYHSESDFLTHAPSSGPPEFKGKATDLSELAFEAFSSRDHAWYDVASFLTYRVNCHGELDARVRYAGFRKDEDEWVNVGR
                  PPP+PPPKLLLYHSESDFLT APSS PPEFKGKATDLSELAFEAFSSRDHAWYDVASFL+YRVNCHGELDARVRYAGF KDEDEWVNV R
Subjt:  ELPPLPTPSSPPPSPPPKLLLYHSESDFLTHAPSSGPPEFKGKATDLSELAFEAFSSRDHAWYDVASFLTYRVNCHGELDARVRYAGFRKDEDEWVNVGR

Query:  GVRDRSIPLESSECYRVKVGDLVLCFQERQDHALYFDAHVVEIQRRLHDISGCRCIFVVRYEHDRHEEKVHIGRLCCRPSAFNSDQI
        GVRDRSIPLESSECYRVKVGDLVLC++E QDHALYFDA+VVEIQRRLHDI GCRCIFVVRY+HD +EEKVH+GRLCCRPSA+NSDQI
Subjt:  GVRDRSIPLESSECYRVKVGDLVLCFQERQDHALYFDAHVVEIQRRLHDISGCRCIFVVRYEHDRHEEKVHIGRLCCRPSAFNSDQI

TrEMBL top hitse value%identityAlignment
A0A0A0KCT9 SAWADEE domain-containing protein1.8e-162100Show/hide
Query:  MEHRKSSKLLDDSSFEFTLAEIVEMDNILKDSRDQTLGQEFFQDVALHFSCSPWRAAKSPVTTEHVHAWFENRRKELRASSKKARPPPPPPSEPPPPPPS
        MEHRKSSKLLDDSSFEFTLAEIVEMDNILKDSRDQTLGQEFFQDVALHFSCSPWRAAKSPVTTEHVHAWFENRRKELRASSKKARPPPPPPSEPPPPPPS
Subjt:  MEHRKSSKLLDDSSFEFTLAEIVEMDNILKDSRDQTLGQEFFQDVALHFSCSPWRAAKSPVTTEHVHAWFENRRKELRASSKKARPPPPPPSEPPPPPPS

Query:  ELPPLPTPSSPPPSPPPKLLLYHSESDFLTHAPSSGPPEFKGKATDLSELAFEAFSSRDHAWYDVASFLTYRVNCHGELDARVRYAGFRKDEDEWVNVGR
        ELPPLPTPSSPPPSPPPKLLLYHSESDFLTHAPSSGPPEFKGKATDLSELAFEAFSSRDHAWYDVASFLTYRVNCHGELDARVRYAGFRKDEDEWVNVGR
Subjt:  ELPPLPTPSSPPPSPPPKLLLYHSESDFLTHAPSSGPPEFKGKATDLSELAFEAFSSRDHAWYDVASFLTYRVNCHGELDARVRYAGFRKDEDEWVNVGR

Query:  GVRDRSIPLESSECYRVKVGDLVLCFQERQDHALYFDAHVVEIQRRLHDISGCRCIFVVRYEHDRHEEKVHIGRLCCRPSAFNSDQI
        GVRDRSIPLESSECYRVKVGDLVLCFQERQDHALYFDAHVVEIQRRLHDISGCRCIFVVRYEHDRHEEKVHIGRLCCRPSAFNSDQI
Subjt:  GVRDRSIPLESSECYRVKVGDLVLCFQERQDHALYFDAHVVEIQRRLHDISGCRCIFVVRYEHDRHEEKVHIGRLCCRPSAFNSDQI

A0A1S3CHG6 protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X18.5e-13384.64Show/hide
Query:  MEHRKSSKLLDDSSFEFTLAEIVEMDNILKDSRDQTLGQEFFQDVALHFSCSPWRAAKSPVTTEHVHAWFENRRKELRASSKKARPPPPPPSEPPPPPPS
        MEH KSSKLLDDSSFEFTLAEIVEMDNILKDS DQTLGQEFFQDVALHFSCSPWRAAKSPVT EHVHAWFENRRKELR+SSKKARPP      PPPPPP 
Subjt:  MEHRKSSKLLDDSSFEFTLAEIVEMDNILKDSRDQTLGQEFFQDVALHFSCSPWRAAKSPVTTEHVHAWFENRRKELRASSKKARPPPPPPSEPPPPPPS

Query:  ELPPLPTPSSPPPSPPPKLLLYHSESDFLTHAPSSGPPEFKGKATDLSELAFEAFSSRDHAWYDV------ASFLTYRVNCHGELDARVRYAGFRKDEDE
        ELP  P+PSSPPP+PPPKLLLYHSESDFLTHAPSS PPEF GKATDLSELAFEAFSSRDHAW  +       S + Y     G+ DARVRYAGF KDEDE
Subjt:  ELPPLPTPSSPPPSPPPKLLLYHSESDFLTHAPSSGPPEFKGKATDLSELAFEAFSSRDHAWYDV------ASFLTYRVNCHGELDARVRYAGFRKDEDE

Query:  WVNVGRGVRDRSIPLESSECYRVKVGDLVLCFQERQDHALYFDAHVVEIQRRLHDISGCRCIFVVRYEHDRHEEKVHIGRLCCRPSAFNSDQI
        WVNV RGVRDRSIPLESSECYRVKVGDLVLCF+ERQDHALYFDA+VVEIQRRLHDI GCRCIFVVRYEHD +EEKVHIGRLCCRPSAFNSD+I
Subjt:  WVNVGRGVRDRSIPLESSECYRVKVGDLVLCFQERQDHALYFDAHVVEIQRRLHDISGCRCIFVVRYEHDRHEEKVHIGRLCCRPSAFNSDQI

A0A1S3CIG7 protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X21.7e-14490.94Show/hide
Query:  MEHRKSSKLLDDSSFEFTLAEIVEMDNILKDSRDQTLGQEFFQDVALHFSCSPWRAAKSPVTTEHVHAWFENRRKELRASSKKARPPPPPPSEPPPPPPS
        MEH KSSKLLDDSSFEFTLAEIVEMDNILKDS DQTLGQEFFQDVALHFSCSPWRAAKSPVT EHVHAWFENRRKELR+SSKKARPP      PPPPPP 
Subjt:  MEHRKSSKLLDDSSFEFTLAEIVEMDNILKDSRDQTLGQEFFQDVALHFSCSPWRAAKSPVTTEHVHAWFENRRKELRASSKKARPPPPPPSEPPPPPPS

Query:  ELPPLPTPSSPPPSPPPKLLLYHSESDFLTHAPSSGPPEFKGKATDLSELAFEAFSSRDHAWYDVASFLTYRVNCHGELDARVRYAGFRKDEDEWVNVGR
        ELP  P+PSSPPP+PPPKLLLYHSESDFLTHAPSS PPEF GKATDLSELAFEAFSSRDHAWYDVASFLTYR+NCHGELDARVRYAGF KDEDEWVNV R
Subjt:  ELPPLPTPSSPPPSPPPKLLLYHSESDFLTHAPSSGPPEFKGKATDLSELAFEAFSSRDHAWYDVASFLTYRVNCHGELDARVRYAGFRKDEDEWVNVGR

Query:  GVRDRSIPLESSECYRVKVGDLVLCFQERQDHALYFDAHVVEIQRRLHDISGCRCIFVVRYEHDRHEEKVHIGRLCCRPSAFNSDQI
        GVRDRSIPLESSECYRVKVGDLVLCF+ERQDHALYFDA+VVEIQRRLHDI GCRCIFVVRYEHD +EEKVHIGRLCCRPSAFNSD+I
Subjt:  GVRDRSIPLESSECYRVKVGDLVLCFQERQDHALYFDAHVVEIQRRLHDISGCRCIFVVRYEHDRHEEKVHIGRLCCRPSAFNSDQI

A0A5A7UBT5 Protein SAWADEE HOMEODOMAIN-like protein 1-like isoform X29.1e-14389.69Show/hide
Query:  MEHRKSSKLLDDSSFEFTLAE----IVEMDNILKDSRDQTLGQEFFQDVALHFSCSPWRAAKSPVTTEHVHAWFENRRKELRASSKKARPPPPPPSEPPP
        MEH KSSKLLDDSSFEFTLAE    IVEMDNILKDS DQTLGQEFFQDVALHFSCSPWRAAKSPVT EHVHAWFENRRKELR+SSKKARPP      PPP
Subjt:  MEHRKSSKLLDDSSFEFTLAE----IVEMDNILKDSRDQTLGQEFFQDVALHFSCSPWRAAKSPVTTEHVHAWFENRRKELRASSKKARPPPPPPSEPPP

Query:  PPPSELPPLPTPSSPPPSPPPKLLLYHSESDFLTHAPSSGPPEFKGKATDLSELAFEAFSSRDHAWYDVASFLTYRVNCHGELDARVRYAGFRKDEDEWV
        PPP ELP  P+PSSPPP+PPPKLLLYHSESDFLTHAPSS PPEF GKATDLSELAFEAFSSRDHAWYDVASFLTYR+NCHGELDARVRYAGF KDEDEWV
Subjt:  PPPSELPPLPTPSSPPPSPPPKLLLYHSESDFLTHAPSSGPPEFKGKATDLSELAFEAFSSRDHAWYDVASFLTYRVNCHGELDARVRYAGFRKDEDEWV

Query:  NVGRGVRDRSIPLESSECYRVKVGDLVLCFQERQDHALYFDAHVVEIQRRLHDISGCRCIFVVRYEHDRHEEKVHIGRLCCRPSAFNSDQI
        NV RGVRDRSIPLESSECYRVKVGDLVLCF+ERQDHALYFDA+VVEIQRRLHDI GCRCIFVVRYEHD +EEKVHIGRLCCRPSAFNSD+I
Subjt:  NVGRGVRDRSIPLESSECYRVKVGDLVLCFQERQDHALYFDAHVVEIQRRLHDISGCRCIFVVRYEHDRHEEKVHIGRLCCRPSAFNSDQI

A0A5D3C067 Protein SAWADEE HOMEODOMAIN-like protein 1-like isoform X11.5e-12471.63Show/hide
Query:  MEHRKSSKLLDDSSFEFTLAE----IVEMDNILKDSRDQTLGQEFFQDVALHFSCSPWRAAKSPVTTEHVHAWFENRRKELRASSKKARPPPPPPSEPPP
        MEH KSSKLLDDSSFEFTLAE    IVEMDNILKDS DQTLGQEFFQDVALHFSCSPWRAAKSPVT EHVHAWFENRRKELR+SSKKARPP      PPP
Subjt:  MEHRKSSKLLDDSSFEFTLAE----IVEMDNILKDSRDQTLGQEFFQDVALHFSCSPWRAAKSPVTTEHVHAWFENRRKELRASSKKARPPPPPPSEPPP

Query:  PPPSELPPLPTPSSPPPSPPPKLLLYHSESDFLTHAPSSGPPEFKGKATDLSELAFEAFSSRDHA--------------WYDVASFL-------------
        PPP ELP  P+PSSPPP+PPPKLLLYHSESDFLTHAPSS PPEF GKATDLSELAFEAFSSRDHA              W+  A+ +             
Subjt:  PPPSELPPLPTPSSPPPSPPPKLLLYHSESDFLTHAPSSGPPEFKGKATDLSELAFEAFSSRDHA--------------WYDVASFL-------------

Query:  ---------------TYRVNCH----------------GELDARVRYAGFRKDEDEWVNVGRGVRDRSIPLESSECYRVKVGDLVLCFQERQDHALYFDA
                       T+R+  H                G+ DARVRYAGF KDEDEWVNV RGVRDRSIPLESSECYRVKVGDLVLCF+ERQDHALYFDA
Subjt:  ---------------TYRVNCH----------------GELDARVRYAGFRKDEDEWVNVGRGVRDRSIPLESSECYRVKVGDLVLCFQERQDHALYFDA

Query:  HVVEIQRRLHDISGCRCIFVVRYEHDRHEEKVHIGRLCCRPSAFNSDQI
        +VVEIQRRLHDI GCRCIFVVRYEHD +EEKVHIGRLCCRPSAFNSD+I
Subjt:  HVVEIQRRLHDISGCRCIFVVRYEHDRHEEKVHIGRLCCRPSAFNSDQI

SwissProt top hitse value%identityAlignment
Q8RWJ7 Protein SAWADEE HOMEODOMAIN HOMOLOG 23.2e-4443.82Show/hide
Query:  SFEFTLAEIVEMDNILKDSRDQTLGQEFFQDVALHFSCSPWRAAKSPVTTEHVHAWFENRRKELRASSKKARPPPPPPSEPPPPPPSELPPLPTPSSPPP
        +F F L E+ EM+ IL        G+   + +A  FS SP R  K  V  + +  WF+NRR  LRA   KA       S P    P+++  +  P S   
Subjt:  SFEFTLAEIVEMDNILKDSRDQTLGQEFFQDVALHFSCSPWRAAKSPVTTEHVHAWFENRRKELRASSKKARPPPPPPSEPPPPPPSELPPLPTPSSPPP

Query:  SPPPKLLLYHSESDFLTHAPS-SGPPEFKGKATDLSELAFEAFSSRDHAWYDVASFLTYRVNCHGELDARVRYAGFRKDEDEWVNVGRGVRDRSIPLESS
           PK          +T APS S  P      +D S L FEA S+RD AWYDV +FL +R    G+ + +VR+AGF  +EDEW+NV + VR RS+P E+S
Subjt:  SPPPKLLLYHSESDFLTHAPS-SGPPEFKGKATDLSELAFEAFSSRDHAWYDVASFLTYRVNCHGELDARVRYAGFRKDEDEWVNVGRGVRDRSIPLESS

Query:  ECYRVKVGDLVLCFQERQDHALYFDAHVVEIQRRLHDISGCRCIFVVRYEHDRHEEKVHIGRLCCRP
        EC  V  GDLVLCFQE +D ALYFDA V++ QRR HD+ GCRC F+VRY HD+ EE V + ++C RP
Subjt:  ECYRVKVGDLVLCFQERQDHALYFDAHVVEIQRRLHDISGCRCIFVVRYEHDRHEEKVHIGRLCCRP

Q9XI47 Protein SAWADEE HOMEODOMAIN HOMOLOG 13.6e-5648.72Show/hide
Query:  DDSSF---EFTLAEIVEMDNILKDSRDQTLGQEFFQDVALHFSCSPWRAAKSPVTTEHVHAWFENRRKELRASSKKARPPPPPPSEPPPPPPSELPPLPT
        DDSS    EFTL+EIV+M+N+ K+  DQ+L ++F Q VA  FSCS  R  KS +T + V  WF+          +K +    P S+  P PP ++  L  
Subjt:  DDSSF---EFTLAEIVEMDNILKDSRDQTLGQEFFQDVALHFSCSPWRAAKSPVTTEHVHAWFENRRKELRASSKKARPPPPPPSEPPPPPPSELPPLPT

Query:  PSSPPPSPPPKLLLYHSESDFLTHAPSSGPPEF-KGKATDLSELAFEAFSSRDHAWYDVASFLTYRVNCHGELDARVRYAGFRKDEDEWVNVGRGVRDRS
        PSS           Y S +   T   +S   +  KGKA+DL++LAFEA S+RD+AWYDV+SFLTYRV   GEL+ RVR++GF    DEWVNV   VR+RS
Subjt:  PSSPPPSPPPKLLLYHSESDFLTHAPSSGPPEF-KGKATDLSELAFEAFSSRDHAWYDVASFLTYRVNCHGELDARVRYAGFRKDEDEWVNVGRGVRDRS

Query:  IPLESSECYRVKVGDLVLCFQERQDHALYFDAHVVEIQRRLHDISGCRCIFVVRYEHDRHEEKVHIGRLCCRP
        IP+E SEC RV VGDL+LCFQER+D ALY D HV+ I+R +HD + C C+F+VRYE D  EE + + R+C RP
Subjt:  IPLESSECYRVKVGDLVLCFQERQDHALYFDAHVVEIQRRLHDISGCRCIFVVRYEHDRHEEKVHIGRLCCRP

Arabidopsis top hitse value%identityAlignment
AT1G15215.1 BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors5.8e-4947.95Show/hide
Query:  MDNILKDSRDQTLGQEFFQDVALHFSCSPWRAAKSPVTTEHVHAWFENRRKELRASSKKARPPPPPPSEPPPPPPSELPPLPTPSSPPPSPPPKLLLYHS
        M+N+ K+  DQ+L ++F Q VA  FSCS  R  KS +T + V  WF+          +K +    P S+  P PP ++  L  PSS           Y S
Subjt:  MDNILKDSRDQTLGQEFFQDVALHFSCSPWRAAKSPVTTEHVHAWFENRRKELRASSKKARPPPPPPSEPPPPPPSELPPLPTPSSPPPSPPPKLLLYHS

Query:  ESDFLTHAPSSGPPEF-KGKATDLSELAFEAFSSRDHAWYDVASFLTYRVNCHGELDARVRYAGFRKDEDEWVNVGRGVRDRSIPLESSECYRVKVGDLV
         +   T   +S   +  KGKA+DL++LAFEA S+RD+AWYDV+SFLTYRV   GEL+ RVR++GF    DEWVNV   VR+RSIP+E SEC RV VGDL+
Subjt:  ESDFLTHAPSSGPPEF-KGKATDLSELAFEAFSSRDHAWYDVASFLTYRVNCHGELDARVRYAGFRKDEDEWVNVGRGVRDRSIPLESSECYRVKVGDLV

Query:  LCFQERQDHALYFDAHVVEIQRRLHDISGCRCIFVVRYEHDRHE
        LCFQER+D ALY D HV+ I+R +HD + C C+F+VRYE D  E
Subjt:  LCFQERQDHALYFDAHVVEIQRRLHDISGCRCIFVVRYEHDRHE

AT1G15215.2 BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors2.6e-5748.72Show/hide
Query:  DDSSF---EFTLAEIVEMDNILKDSRDQTLGQEFFQDVALHFSCSPWRAAKSPVTTEHVHAWFENRRKELRASSKKARPPPPPPSEPPPPPPSELPPLPT
        DDSS    EFTL+EIV+M+N+ K+  DQ+L ++F Q VA  FSCS  R  KS +T + V  WF+          +K +    P S+  P PP ++  L  
Subjt:  DDSSF---EFTLAEIVEMDNILKDSRDQTLGQEFFQDVALHFSCSPWRAAKSPVTTEHVHAWFENRRKELRASSKKARPPPPPPSEPPPPPPSELPPLPT

Query:  PSSPPPSPPPKLLLYHSESDFLTHAPSSGPPEF-KGKATDLSELAFEAFSSRDHAWYDVASFLTYRVNCHGELDARVRYAGFRKDEDEWVNVGRGVRDRS
        PSS           Y S +   T   +S   +  KGKA+DL++LAFEA S+RD+AWYDV+SFLTYRV   GEL+ RVR++GF    DEWVNV   VR+RS
Subjt:  PSSPPPSPPPKLLLYHSESDFLTHAPSSGPPEF-KGKATDLSELAFEAFSSRDHAWYDVASFLTYRVNCHGELDARVRYAGFRKDEDEWVNVGRGVRDRS

Query:  IPLESSECYRVKVGDLVLCFQERQDHALYFDAHVVEIQRRLHDISGCRCIFVVRYEHDRHEEKVHIGRLCCRP
        IP+E SEC RV VGDL+LCFQER+D ALY D HV+ I+R +HD + C C+F+VRYE D  EE + + R+C RP
Subjt:  IPLESSECYRVKVGDLVLCFQERQDHALYFDAHVVEIQRRLHDISGCRCIFVVRYEHDRHEEKVHIGRLCCRP

AT1G15215.3 BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors1.3e-5349.04Show/hide
Query:  DDSSF---EFTLAEIVEMDNILKDSRDQTLGQEFFQDVALHFSCSPWRAAKSPVTTEHVHAWFENRRKELRASSKKARPPPPPPSEPPPPPPSELPPLPT
        DDSS    EFTL+EIV+M+N+ K+  DQ+L ++F Q VA  FSCS  R  KS +T + V  WF+          +K +    P S+  P PP ++  L  
Subjt:  DDSSF---EFTLAEIVEMDNILKDSRDQTLGQEFFQDVALHFSCSPWRAAKSPVTTEHVHAWFENRRKELRASSKKARPPPPPPSEPPPPPPSELPPLPT

Query:  PSSPPPSPPPKLLLYHSESDFLTHAPSSGPPEF-KGKATDLSELAFEAFSSRDHAWYDVASFLTYRVNCHGELDARVRYAGFRKDEDEWVNVGRGVRDRS
        PSS           Y S +   T   +S   +  KGKA+DL++LAFEA S+RD+AWYDV+SFLTYRV   GEL+ RVR++GF    DEWVNV   VR+RS
Subjt:  PSSPPPSPPPKLLLYHSESDFLTHAPSSGPPEF-KGKATDLSELAFEAFSSRDHAWYDVASFLTYRVNCHGELDARVRYAGFRKDEDEWVNVGRGVRDRS

Query:  IPLESSECYRVKVGDLVLCFQERQDHALYFDAHVVEIQRRLHDISGCRCIFVVRYEHDRHE
        IP+E SEC RV VGDL+LCFQER+D ALY D HV+ I+R +HD + C C+F+VRYE D  E
Subjt:  IPLESSECYRVKVGDLVLCFQERQDHALYFDAHVVEIQRRLHDISGCRCIFVVRYEHDRHE

AT3G18380.1 sequence-specific DNA binding transcription factors;sequence-specific DNA binding2.3e-4543.82Show/hide
Query:  SFEFTLAEIVEMDNILKDSRDQTLGQEFFQDVALHFSCSPWRAAKSPVTTEHVHAWFENRRKELRASSKKARPPPPPPSEPPPPPPSELPPLPTPSSPPP
        +F F L E+ EM+ IL        G+   + +A  FS SP R  K  V  + +  WF+NRR  LRA   KA       S P    P+++  +  P S   
Subjt:  SFEFTLAEIVEMDNILKDSRDQTLGQEFFQDVALHFSCSPWRAAKSPVTTEHVHAWFENRRKELRASSKKARPPPPPPSEPPPPPPSELPPLPTPSSPPP

Query:  SPPPKLLLYHSESDFLTHAPS-SGPPEFKGKATDLSELAFEAFSSRDHAWYDVASFLTYRVNCHGELDARVRYAGFRKDEDEWVNVGRGVRDRSIPLESS
           PK          +T APS S  P      +D S L FEA S+RD AWYDV +FL +R    G+ + +VR+AGF  +EDEW+NV + VR RS+P E+S
Subjt:  SPPPKLLLYHSESDFLTHAPS-SGPPEFKGKATDLSELAFEAFSSRDHAWYDVASFLTYRVNCHGELDARVRYAGFRKDEDEWVNVGRGVRDRSIPLESS

Query:  ECYRVKVGDLVLCFQERQDHALYFDAHVVEIQRRLHDISGCRCIFVVRYEHDRHEEKVHIGRLCCRP
        EC  V  GDLVLCFQE +D ALYFDA V++ QRR HD+ GCRC F+VRY HD+ EE V + ++C RP
Subjt:  ECYRVKVGDLVLCFQERQDHALYFDAHVVEIQRRLHDISGCRCIFVVRYEHDRHEEKVHIGRLCCRP

AT3G18380.2 sequence-specific DNA binding transcription factors;sequence-specific DNA binding4.3e-4443.28Show/hide
Query:  SFEFTLAEIVEMDNILKDSRDQTLGQEFFQDVALHFSCSPWRAAKSPVTTEHVHAWFENRRKELRASSKKARPPPPPPSEPPPPPPSELPPLPTPSSPPP
        +F F L E+ EM+ IL        G+   + +A  FS SP R  K  V  + +  WF+NRR  LRA   KA       S P    P+++  +  P S   
Subjt:  SFEFTLAEIVEMDNILKDSRDQTLGQEFFQDVALHFSCSPWRAAKSPVTTEHVHAWFENRRKELRASSKKARPPPPPPSEPPPPPPSELPPLPTPSSPPP

Query:  SPPPKLLLYHSESDFLTHAPS-SGPPEFKGKATDLSELAFEAFSSRDHAWYDVASFLTYRVNCHGELDARVRYAGFRKDEDEWVNVGRGVRDRSIPLESS
           PK          +T APS S  P      +D S L FEA S+RD AWYDV +FL +R    G+ + +VR+AGF  +EDEW+NV + VR RS+P E+S
Subjt:  SPPPKLLLYHSESDFLTHAPS-SGPPEFKGKATDLSELAFEAFSSRDHAWYDVASFLTYRVNCHGELDARVRYAGFRKDEDEWVNVGRGVRDRSIPLESS

Query:  ECYRVKVGDLVLCFQERQDHALYFDAHVVEIQRRLHDISGCRCIFVVRYEHDRHEEK-VHIGRLCCRP
        EC  V  GDLVLCFQE +D ALYFDA V++ QRR HD+ GCRC F+VRY HD+ E++ V + ++C RP
Subjt:  ECYRVKVGDLVLCFQERQDHALYFDAHVVEIQRRLHDISGCRCIFVVRYEHDRHEEK-VHIGRLCCRP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCATCGAAAATCGTCAAAGCTTTTAGATGATTCTTCATTCGAATTCACACTAGCTGAGATTGTGGAGATGGATAATATCTTGAAGGATTCTAGAGATCAAACACT
TGGTCAAGAGTTCTTCCAAGATGTCGCGCTTCATTTCAGTTGCTCTCCGTGGCGCGCTGCAAAATCTCCCGTCACTACGGAACATGTGCATGCCTGGTTTGAGAATCGGA
GAAAGGAATTGCGAGCTAGTTCTAAGAAAGCTCGGCCTCCACCTCCGCCTCCGTCTGAACCTCCACCTCCGCCTCCGTCTGAACTTCCACCTCTACCTACGCCATCGTCT
CCCCCTCCGTCTCCACCACCGAAACTCTTGCTTTATCATTCGGAGAGTGATTTTTTAACTCACGCGCCTTCATCTGGACCACCTGAATTCAAAGGCAAGGCAACTGATCT
TTCAGAGTTAGCATTTGAGGCATTTTCATCAAGAGACCATGCCTGGTATGACGTAGCTTCCTTCCTCACTTACCGAGTTAATTGCCATGGAGAACTAGACGCTCGAGTTC
GATATGCTGGTTTCAGAAAGGATGAGGATGAGTGGGTTAATGTTGGAAGAGGAGTGCGTGATCGGTCTATACCTTTGGAATCTTCCGAGTGTTACAGAGTGAAAGTTGGA
GATCTTGTGTTATGTTTCCAGGAAAGACAAGATCATGCCCTCTACTTCGATGCACATGTTGTGGAAATTCAGAGGAGGTTACATGATATTAGTGGTTGTCGATGCATATT
TGTAGTACGCTATGAGCATGATCGCCATGAGGAAAAAGTGCATATAGGGAGATTATGCTGCAGGCCTTCCGCGTTCAACTCGGACCAAATTTAA
mRNA sequenceShow/hide mRNA sequence
CTCAACACCAACAACAACCACACTTCTTACCTCTTCTTACCTCTTCTTCCTCTTCTTCGTGCGTTTTCCATAATTTCTTCTGTTTTTGGCTATGGAGCATCGAAAATCGT
CAAAGCTTTTAGATGATTCTTCATTCGAATTCACACTAGCTGAGATTGTGGAGATGGATAATATCTTGAAGGATTCTAGAGATCAAACACTTGGTCAAGAGTTCTTCCAA
GATGTCGCGCTTCATTTCAGTTGCTCTCCGTGGCGCGCTGCAAAATCTCCCGTCACTACGGAACATGTGCATGCCTGGTTTGAGAATCGGAGAAAGGAATTGCGAGCTAG
TTCTAAGAAAGCTCGGCCTCCACCTCCGCCTCCGTCTGAACCTCCACCTCCGCCTCCGTCTGAACTTCCACCTCTACCTACGCCATCGTCTCCCCCTCCGTCTCCACCAC
CGAAACTCTTGCTTTATCATTCGGAGAGTGATTTTTTAACTCACGCGCCTTCATCTGGACCACCTGAATTCAAAGGCAAGGCAACTGATCTTTCAGAGTTAGCATTTGAG
GCATTTTCATCAAGAGACCATGCCTGGTATGACGTAGCTTCCTTCCTCACTTACCGAGTTAATTGCCATGGAGAACTAGACGCTCGAGTTCGATATGCTGGTTTCAGAAA
GGATGAGGATGAGTGGGTTAATGTTGGAAGAGGAGTGCGTGATCGGTCTATACCTTTGGAATCTTCCGAGTGTTACAGAGTGAAAGTTGGAGATCTTGTGTTATGTTTCC
AGGAAAGACAAGATCATGCCCTCTACTTCGATGCACATGTTGTGGAAATTCAGAGGAGGTTACATGATATTAGTGGTTGTCGATGCATATTTGTAGTACGCTATGAGCAT
GATCGCCATGAGGAAAAAGTGCATATAGGGAGATTATGCTGCAGGCCTTCCGCGTTCAACTCGGACCAAATTTAA
Protein sequenceShow/hide protein sequence
MEHRKSSKLLDDSSFEFTLAEIVEMDNILKDSRDQTLGQEFFQDVALHFSCSPWRAAKSPVTTEHVHAWFENRRKELRASSKKARPPPPPPSEPPPPPPSELPPLPTPSS
PPPSPPPKLLLYHSESDFLTHAPSSGPPEFKGKATDLSELAFEAFSSRDHAWYDVASFLTYRVNCHGELDARVRYAGFRKDEDEWVNVGRGVRDRSIPLESSECYRVKVG
DLVLCFQERQDHALYFDAHVVEIQRRLHDISGCRCIFVVRYEHDRHEEKVHIGRLCCRPSAFNSDQI