; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPIUnG00160 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPIUnG00160
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionATP-dependent DNA helicase At3g02060, chloroplastic
Genome locationScaffold000091:182667..196252
RNA-Seq ExpressionCSPIUnG00160
SyntenyCSPIUnG00160
Gene Ontology termsGO:0000967 - rRNA 5'-end processing (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0071035 - nuclear polyadenylation-dependent rRNA catabolic process (biological process)
GO:0060149 - negative regulation of posttranscriptional gene silencing (biological process)
GO:0010587 - miRNA catabolic process (biological process)
GO:0006397 - mRNA processing (biological process)
GO:0006281 - DNA repair (biological process)
GO:0000956 - nuclear-transcribed mRNA catabolic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0004534 - 5'-3' exoribonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0004386 - helicase activity (molecular function)
GO:0003723 - RNA binding (molecular function)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR001650 - Helicase, C-terminal
IPR003711 - CarD-like/TRCF domain
IPR011545 - DEAD/DEAH box helicase domain
IPR014001 - Helicase superfamily 1/2, ATP-binding domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR036101 - CarD-like/TRCF domain superfamily
IPR037235 - TRCF-like, C-terminal D7 domai


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066106.1 ATP-dependent DNA helicase [Cucumis melo var. makuwa]0.0e+0096.23Show/hide
Query:  MAFLLSPAPDVSSSPPVLPFKLCSFPTLRGWGLFNRNSTFRHFPNRCVSITNVVYAEDVIVPGTAKSSRRRDQIELERDSISLLNERILRFHGKRDSSRT
        M+FL SPAPDVSSS P+L FKL SFPTL GWGLFNRN TFRHFPNRCVS+TNV YAEDVIVPGTAKS+RRRDQIELERDSIS+LNERILRFHGKRDSSRT
Subjt:  MAFLLSPAPDVSSSPPVLPFKLCSFPTLRGWGLFNRNSTFRHFPNRCVSITNVVYAEDVIVPGTAKSSRRRDQIELERDSISLLNERILRFHGKRDSSRT

Query:  AMDSEEADRYIQMVKEQQQRGLQKLKGDRQRKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAIEYVFIEYADGMAKLPVKQASRML
         MDSEEADRYIQMVKEQQQRGLQKLKGD+QRKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFV IKFDVQKGSTE  EYVFIEYADGMAKLPVKQASRML
Subjt:  AMDSEEADRYIQMVKEQQQRGLQKLKGDRQRKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAIEYVFIEYADGMAKLPVKQASRML

Query:  YRYSLPNENKRPRTLSKLNDTTTWEKRKTKGKIAIQKMVVDLMELYLHRLKQRRSPYPKCSAMKEFSAQFPYEPTVDQKEAFRDVEKDLTGRETPMDRLI
        YRY+LPNENK+PRTLSKLNDTTTWEKRKTKGK+AIQKMVVDLMELYLHRLKQRRSPYPKCSAM+EFSAQFPYEPTVDQKEAFRDVE+DLT RETPMDRLI
Subjt:  YRYSLPNENKRPRTLSKLNDTTTWEKRKTKGKIAIQKMVVDLMELYLHRLKQRRSPYPKCSAMKEFSAQFPYEPTVDQKEAFRDVEKDLTGRETPMDRLI

Query:  CGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFSDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL
        CGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSF DVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL
Subjt:  CGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFSDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL

Query:  LVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEV
        LVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQ+FYVLPRIKGLEEV
Subjt:  LVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEV

Query:  KEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDD
        KEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSD+
Subjt:  KEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDD

Query:  ALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILN
        ALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILN
Subjt:  ALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILN

Query:  GAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGIFRIYASGKTVCMETNMNKKVFKLISDSMTSEVHRNCLSFEEHQIKAG
        GAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGI RIYASGK VCMETNMNKKVF+LISDSMTSEVHRNCLSFEEHQIK G
Subjt:  GAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGIFRIYASGKTVCMETNMNKKVFKLISDSMTSEVHRNCLSFEEHQIKAG

KGN51170.2 hypothetical protein Csa_023202 [Cucumis sativus]0.0e+0099.5Show/hide
Query:  MAFLLSPAPDVSSSPPVLPFKLCSFPTLRGWGLFNRNSTFRHFPNRCVSITNVVYAEDVIVPGTAKSSRRRDQIELERDSISLLNERILRFHGKRDSSRT
        MAFLLSPAPDVSSSPPVLPFKLCSFPTLRGWGLFNRNSTFRHFPNRCVSITNVVYAEDVIVPGTAKSSRRRDQIELERDSISLLNERILRFHGKRDSSRT
Subjt:  MAFLLSPAPDVSSSPPVLPFKLCSFPTLRGWGLFNRNSTFRHFPNRCVSITNVVYAEDVIVPGTAKSSRRRDQIELERDSISLLNERILRFHGKRDSSRT

Query:  AMDSEEADRYIQMVKEQQQRGLQKLKGDRQRKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAIEYVFIEYADGMAKLPVKQASRML
        AMDSEEADRYIQMVKEQQQRGLQKLKGDRQRKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAIEYVFIEYADGMAKLPVKQASRML
Subjt:  AMDSEEADRYIQMVKEQQQRGLQKLKGDRQRKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAIEYVFIEYADGMAKLPVKQASRML

Query:  YRYSLPNENKRPRTLSKLNDTTTWEKRKTKGKIAIQKMVVDLMELYLHRLKQRRSPYPKCSAMKEFSAQFPYEPTVDQKEAFRDVEKDLTGRETPMDRLI
        YRYSLPNENKRPRTLSKLNDTTTWEKRKTKGKIAIQKMVVDLMELYLHRLKQRRSPYPKCSAM+EFSAQFPYEPTVDQKEAFRDVEKDLTGRETPMDRLI
Subjt:  YRYSLPNENKRPRTLSKLNDTTTWEKRKTKGKIAIQKMVVDLMELYLHRLKQRRSPYPKCSAMKEFSAQFPYEPTVDQKEAFRDVEKDLTGRETPMDRLI

Query:  CGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFSDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL
        CGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSF DVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL
Subjt:  CGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFSDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL

Query:  LVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEV
        LVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEV
Subjt:  LVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEV

Query:  KEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDD
        KEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDD
Subjt:  KEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDD

Query:  ALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILN
        ALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILN
Subjt:  ALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILN

Query:  GAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGIFRIYASGKTVCMETNMNKKVFKLISDSMTSEVHRNCLSFEEHQIKAGLL
        GAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGI RIYASGKTVCMETNMNKKVFKLISDSMTSEVHRNCLSFEEHQIKA LL
Subjt:  GAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGIFRIYASGKTVCMETNMNKKVFKLISDSMTSEVHRNCLSFEEHQIKAGLL

XP_004150202.1 ATP-dependent DNA helicase At3g02060, chloroplastic [Cucumis sativus]0.0e+0099.52Show/hide
Query:  MAFLLSPAPDVSSSPPVLPFKLCSFPTLRGWGLFNRNSTFRHFPNRCVSITNVVYAEDVIVPGTAKSSRRRDQIELERDSISLLNERILRFHGKRDSSRT
        MAFLLSPAPDVSSSPPVLPFKLCSFPTLRGWGLFNRNSTFRHFPNRCVSITNVVYAEDVIVPGTAKSSRRRDQIELERDSISLLNERILRFHGKRDSSRT
Subjt:  MAFLLSPAPDVSSSPPVLPFKLCSFPTLRGWGLFNRNSTFRHFPNRCVSITNVVYAEDVIVPGTAKSSRRRDQIELERDSISLLNERILRFHGKRDSSRT

Query:  AMDSEEADRYIQMVKEQQQRGLQKLKGDRQRKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAIEYVFIEYADGMAKLPVKQASRML
        AMDSEEADRYIQMVKEQQQRGLQKLKGDRQRKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAIEYVFIEYADGMAKLPVKQASRML
Subjt:  AMDSEEADRYIQMVKEQQQRGLQKLKGDRQRKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAIEYVFIEYADGMAKLPVKQASRML

Query:  YRYSLPNENKRPRTLSKLNDTTTWEKRKTKGKIAIQKMVVDLMELYLHRLKQRRSPYPKCSAMKEFSAQFPYEPTVDQKEAFRDVEKDLTGRETPMDRLI
        YRYSLPNENKRPRTLSKLNDTTTWEKRKTKGKIAIQKMVVDLMELYLHRLKQRRSPYPKCSAM+EFSAQFPYEPTVDQKEAFRDVEKDLTGRETPMDRLI
Subjt:  YRYSLPNENKRPRTLSKLNDTTTWEKRKTKGKIAIQKMVVDLMELYLHRLKQRRSPYPKCSAMKEFSAQFPYEPTVDQKEAFRDVEKDLTGRETPMDRLI

Query:  CGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFSDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL
        CGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSF DVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL
Subjt:  CGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFSDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL

Query:  LVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEV
        LVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEV
Subjt:  LVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEV

Query:  KEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDD
        KEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDD
Subjt:  KEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDD

Query:  ALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILN
        ALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILN
Subjt:  ALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILN

Query:  GAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGIFRIYASGKTVCMETNMNKKVFKLISDSMTSEVHRNCLSFEEHQIKAGLLLE
        GAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGI RIYASGKTVCMETNMNKKVFKLISDSMTSEVHRNCLSFEEHQIKAGLLLE
Subjt:  GAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGIFRIYASGKTVCMETNMNKKVFKLISDSMTSEVHRNCLSFEEHQIKAGLLLE

Query:  LPREQLLNWIFECLVELHASLPALIKY
        LPREQLLNWIFECLVELHAS PALIKY
Subjt:  LPREQLLNWIFECLVELHASLPALIKY

XP_008465367.1 PREDICTED: ATP-dependent DNA helicase At3g02060, chloroplastic [Cucumis melo]0.0e+0096.13Show/hide
Query:  MAFLLSPAPDVSSSPPVLPFKLCSFPTLRGWGLFNRNSTFRHFPNRCVSITNVVYAEDVIVPGTAKSSRRRDQIELERDSISLLNERILRFHGKRDSSRT
        M+FL SPAPDVSSS P+L FKL SFPTL GWGLFNRN TFRHFPNRCVS+TNV YAEDVIVPGTAKS+RRRDQIELERDSIS+LNERILRFHGKRDSSRT
Subjt:  MAFLLSPAPDVSSSPPVLPFKLCSFPTLRGWGLFNRNSTFRHFPNRCVSITNVVYAEDVIVPGTAKSSRRRDQIELERDSISLLNERILRFHGKRDSSRT

Query:  AMDSEEADRYIQMVKEQQQRGLQKLKGDRQRKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAIEYVFIEYADGMAKLPVKQASRML
         MDSEEADRYIQMVKEQQQRGLQKLKGD+QRKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFV IKFDVQKGSTE  EYVFIEYADGMAKLPVKQASRML
Subjt:  AMDSEEADRYIQMVKEQQQRGLQKLKGDRQRKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAIEYVFIEYADGMAKLPVKQASRML

Query:  YRYSLPNENKRPRTLSKLNDTTTWEKRKTKGKIAIQKMVVDLMELYLHRLKQRRSPYPKCSAMKEFSAQFPYEPTVDQKEAFRDVEKDLTGRETPMDRLI
        YRY+LPNEN++PRTLSKLNDTTTWEKRKTKGK+AIQKMVVDLMELYLHRLKQRRSPYPKCSAM+EFSAQFPYEPTVDQKEAFRDVE+DLT RETPMDRLI
Subjt:  YRYSLPNENKRPRTLSKLNDTTTWEKRKTKGKIAIQKMVVDLMELYLHRLKQRRSPYPKCSAMKEFSAQFPYEPTVDQKEAFRDVEKDLTGRETPMDRLI

Query:  CGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFSDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL
        CGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSF DVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL
Subjt:  CGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFSDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL

Query:  LVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEV
        LVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQ+FYVLPRIKGLEEV
Subjt:  LVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEV

Query:  KEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDD
        KEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSD+
Subjt:  KEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDD

Query:  ALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILN
        ALERLAALE+CRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILN
Subjt:  ALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILN

Query:  GAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGIFRIYASGKTVCMETNMNKKVFKLISDSMTSEVHRNCLSFEEHQIKAGLLLE
        GAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGI RIYASGK VCMETNMNKKVF+LISDSMTSEVHRNCLSFEEHQIKAGLLLE
Subjt:  GAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGIFRIYASGKTVCMETNMNKKVFKLISDSMTSEVHRNCLSFEEHQIKAGLLLE

Query:  LPREQLLNWIFECLVELHASLPALIKY
        LPREQLLNW+FECLVELHASLPALIKY
Subjt:  LPREQLLNWIFECLVELHASLPALIKY

XP_038907244.1 ATP-dependent DNA helicase At3g02060, chloroplastic isoform X1 [Benincasa hispida]0.0e+0095.16Show/hide
Query:  MAFLLSPAPDVSSSPPVLPFKLCSFPTLRGWGLFNRNSTFRHFPNRCVSITNVVYAEDVIVPGTAKSSRRRDQIELERDSISLLNERILRFHGKRDSSRT
        MA L SPAPDVSSS P++ FKL SFP+LR  GLFNRNSTFRHFP R VSITNV+YAEDVIVPG AKS+RRR+QIELERDSIS+LNERI RFHGKR+SSRT
Subjt:  MAFLLSPAPDVSSSPPVLPFKLCSFPTLRGWGLFNRNSTFRHFPNRCVSITNVVYAEDVIVPGTAKSSRRRDQIELERDSISLLNERILRFHGKRDSSRT

Query:  AMDSEEADRYIQMVKEQQQRGLQKLKGDRQRKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAIEYVFIEYADGMAKLPVKQASRML
         MDSEEADRYIQMVKEQQQRGLQKLKGDRQRK+SDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTE IEYVFIEYADGMAKLPVKQASRML
Subjt:  AMDSEEADRYIQMVKEQQQRGLQKLKGDRQRKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAIEYVFIEYADGMAKLPVKQASRML

Query:  YRYSLPNENKRPRTLSKLNDTTTWEKRKTKGKIAIQKMVVDLMELYLHRLKQRRSPYPKCSAMKEFSAQFPYEPTVDQKEAFRDVEKDLTGRETPMDRLI
        YRY+LPNENKRPRTLSKLNDTTTWEKRKTKGK+AIQKMVVDLMELYLHRLKQRRSPYPKCSAM+EFSAQFPYEPTVDQKEAFRDVE+DLT RETPMDRLI
Subjt:  YRYSLPNENKRPRTLSKLNDTTTWEKRKTKGKIAIQKMVVDLMELYLHRLKQRRSPYPKCSAMKEFSAQFPYEPTVDQKEAFRDVEKDLTGRETPMDRLI

Query:  CGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFSDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL
        CGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFS F DVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYS LGL
Subjt:  CGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFSDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL

Query:  LVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEV
        LVVDEEQRFGVKQKEKIASFKTS+DVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAI+YELERGGQVFYVLPRIKGLEEV
Subjt:  LVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEV

Query:  KEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDD
        KEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEA+AYLFYPDKSLLS++
Subjt:  KEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDD

Query:  ALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILN
        ALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLF+SLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILN
Subjt:  ALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILN

Query:  GAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGIFRIYASGKTVCMETNMNKKVFKLISDSMTSEVHRNCLSFEEHQIKAGLLLE
        GAE AAETDIWTLMQFTENLRR HGKEPYSMEILLKKLYVRRMAADLGI RIYASGK VCMETNMNKKVFKLISDSMTSEVHRNCLSFEEHQIKAGLLLE
Subjt:  GAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGIFRIYASGKTVCMETNMNKKVFKLISDSMTSEVHRNCLSFEEHQIKAGLLLE

Query:  LPREQLLNWIFECLVELHASLPALIKY
        LPREQLLNWIFECLVELHASLPALIKY
Subjt:  LPREQLLNWIFECLVELHASLPALIKY

TrEMBL top hitse value%identityAlignment
A0A1S3CNQ6 ATP-dependent DNA helicase At3g02060, chloroplastic0.0e+0096.13Show/hide
Query:  MAFLLSPAPDVSSSPPVLPFKLCSFPTLRGWGLFNRNSTFRHFPNRCVSITNVVYAEDVIVPGTAKSSRRRDQIELERDSISLLNERILRFHGKRDSSRT
        M+FL SPAPDVSSS P+L FKL SFPTL GWGLFNRN TFRHFPNRCVS+TNV YAEDVIVPGTAKS+RRRDQIELERDSIS+LNERILRFHGKRDSSRT
Subjt:  MAFLLSPAPDVSSSPPVLPFKLCSFPTLRGWGLFNRNSTFRHFPNRCVSITNVVYAEDVIVPGTAKSSRRRDQIELERDSISLLNERILRFHGKRDSSRT

Query:  AMDSEEADRYIQMVKEQQQRGLQKLKGDRQRKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAIEYVFIEYADGMAKLPVKQASRML
         MDSEEADRYIQMVKEQQQRGLQKLKGD+QRKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFV IKFDVQKGSTE  EYVFIEYADGMAKLPVKQASRML
Subjt:  AMDSEEADRYIQMVKEQQQRGLQKLKGDRQRKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAIEYVFIEYADGMAKLPVKQASRML

Query:  YRYSLPNENKRPRTLSKLNDTTTWEKRKTKGKIAIQKMVVDLMELYLHRLKQRRSPYPKCSAMKEFSAQFPYEPTVDQKEAFRDVEKDLTGRETPMDRLI
        YRY+LPNEN++PRTLSKLNDTTTWEKRKTKGK+AIQKMVVDLMELYLHRLKQRRSPYPKCSAM+EFSAQFPYEPTVDQKEAFRDVE+DLT RETPMDRLI
Subjt:  YRYSLPNENKRPRTLSKLNDTTTWEKRKTKGKIAIQKMVVDLMELYLHRLKQRRSPYPKCSAMKEFSAQFPYEPTVDQKEAFRDVEKDLTGRETPMDRLI

Query:  CGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFSDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL
        CGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSF DVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL
Subjt:  CGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFSDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL

Query:  LVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEV
        LVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQ+FYVLPRIKGLEEV
Subjt:  LVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEV

Query:  KEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDD
        KEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSD+
Subjt:  KEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDD

Query:  ALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILN
        ALERLAALE+CRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILN
Subjt:  ALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILN

Query:  GAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGIFRIYASGKTVCMETNMNKKVFKLISDSMTSEVHRNCLSFEEHQIKAGLLLE
        GAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGI RIYASGK VCMETNMNKKVF+LISDSMTSEVHRNCLSFEEHQIKAGLLLE
Subjt:  GAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGIFRIYASGKTVCMETNMNKKVFKLISDSMTSEVHRNCLSFEEHQIKAGLLLE

Query:  LPREQLLNWIFECLVELHASLPALIKY
        LPREQLLNW+FECLVELHASLPALIKY
Subjt:  LPREQLLNWIFECLVELHASLPALIKY

A0A5A7VIC8 ATP-dependent DNA helicase0.0e+0096.23Show/hide
Query:  MAFLLSPAPDVSSSPPVLPFKLCSFPTLRGWGLFNRNSTFRHFPNRCVSITNVVYAEDVIVPGTAKSSRRRDQIELERDSISLLNERILRFHGKRDSSRT
        M+FL SPAPDVSSS P+L FKL SFPTL GWGLFNRN TFRHFPNRCVS+TNV YAEDVIVPGTAKS+RRRDQIELERDSIS+LNERILRFHGKRDSSRT
Subjt:  MAFLLSPAPDVSSSPPVLPFKLCSFPTLRGWGLFNRNSTFRHFPNRCVSITNVVYAEDVIVPGTAKSSRRRDQIELERDSISLLNERILRFHGKRDSSRT

Query:  AMDSEEADRYIQMVKEQQQRGLQKLKGDRQRKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAIEYVFIEYADGMAKLPVKQASRML
         MDSEEADRYIQMVKEQQQRGLQKLKGD+QRKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFV IKFDVQKGSTE  EYVFIEYADGMAKLPVKQASRML
Subjt:  AMDSEEADRYIQMVKEQQQRGLQKLKGDRQRKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAIEYVFIEYADGMAKLPVKQASRML

Query:  YRYSLPNENKRPRTLSKLNDTTTWEKRKTKGKIAIQKMVVDLMELYLHRLKQRRSPYPKCSAMKEFSAQFPYEPTVDQKEAFRDVEKDLTGRETPMDRLI
        YRY+LPNENK+PRTLSKLNDTTTWEKRKTKGK+AIQKMVVDLMELYLHRLKQRRSPYPKCSAM+EFSAQFPYEPTVDQKEAFRDVE+DLT RETPMDRLI
Subjt:  YRYSLPNENKRPRTLSKLNDTTTWEKRKTKGKIAIQKMVVDLMELYLHRLKQRRSPYPKCSAMKEFSAQFPYEPTVDQKEAFRDVEKDLTGRETPMDRLI

Query:  CGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFSDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL
        CGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSF DVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL
Subjt:  CGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFSDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL

Query:  LVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEV
        LVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQ+FYVLPRIKGLEEV
Subjt:  LVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEV

Query:  KEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDD
        KEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSD+
Subjt:  KEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDD

Query:  ALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILN
        ALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILN
Subjt:  ALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILN

Query:  GAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGIFRIYASGKTVCMETNMNKKVFKLISDSMTSEVHRNCLSFEEHQIKAG
        GAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGI RIYASGK VCMETNMNKKVF+LISDSMTSEVHRNCLSFEEHQIK G
Subjt:  GAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGIFRIYASGKTVCMETNMNKKVFKLISDSMTSEVHRNCLSFEEHQIKAG

A0A6J1CJT5 ATP-dependent DNA helicase At3g02060, chloroplastic isoform X10.0e+0092.48Show/hide
Query:  LLSPAPDVSSSPPVLPFKLCSFPTLRGWGLFNRNSTFRHFPNRCVSITNVVYAEDVIVPGTAKSSRRRDQIELERDSISLLNERILRFHGKRDSSRTAMD
        LLSPAPDVS+  P++ F+L SFP  R W LFNRN T R  P RC+S+TNVVYAEDV+VPGTAKS+RRR+QIELERDSIS+LNER+ R+HGKR+SSRTAMD
Subjt:  LLSPAPDVSSSPPVLPFKLCSFPTLRGWGLFNRNSTFRHFPNRCVSITNVVYAEDVIVPGTAKSSRRRDQIELERDSISLLNERILRFHGKRDSSRTAMD

Query:  SEEADRYIQMVKEQQQRGLQKLKGDRQRKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAIEYVFIEYADGMAKLPVKQASRMLYRY
        +EEADRYIQMVKEQQQRGLQKLKGDRQR ESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTE IEYVFIEYADGMAKLPVKQASRMLYRY
Subjt:  SEEADRYIQMVKEQQQRGLQKLKGDRQRKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAIEYVFIEYADGMAKLPVKQASRMLYRY

Query:  SLPNENKRPRTLSKLNDTTTWEKRKTKGKIAIQKMVVDLMELYLHRLKQRRSPYPKCSAMKEFSAQFPYEPTVDQKEAFRDVEKDLTGRETPMDRLICGD
        +LPNE KRPRTLSKLNDT+TWEKRKTKGK+AIQKMVVDLMELYLHRLKQRR PYPKCSAM++F+AQFPYEPTVDQKEAF DVEKDLT RETPMDRLICGD
Subjt:  SLPNENKRPRTLSKLNDTTTWEKRKTKGKIAIQKMVVDLMELYLHRLKQRRSPYPKCSAMKEFSAQFPYEPTVDQKEAFRDVEKDLTGRETPMDRLICGD

Query:  VGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFSDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVV
        VGFGKTEVALRAIFCVVS+GKQAMVLAPTIVLAKQHFEVITQRFSSF DVQIGLLSRFQTKAEKEKHL+MIKEGQL+IIVGTHSLLGDRVVY+NLGLLVV
Subjt:  VGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFSDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVV

Query:  DEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKEF
        DEEQRFGVKQKEKIASFKTS+DVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVK+F
Subjt:  DEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKEF

Query:  LEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDDALE
        LEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEA+AYLFYPDKSLLSD ALE
Subjt:  LEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDDALE

Query:  RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILNGAE
        RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKID+DI PHLPSEYINYLENPMKI+NGAE
Subjt:  RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILNGAE

Query:  RAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGIFRIYASGKTVCMETNMNKKVFKLISDSMTSEVHRNCLSFEEHQIKAGLLLELPR
        +AAETDIW LMQFTENLRR HGKEPYSMEILLKKLYVRRMAADLGI RIYASGKTVCMET MN+KVFKLI+DSMTSEVH+NCLSFEEH IKAGLLLELP+
Subjt:  RAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGIFRIYASGKTVCMETNMNKKVFKLISDSMTSEVHRNCLSFEEHQIKAGLLLELPR

Query:  EQLLNWIFECLVELHASLPALIKY
        EQLLNWIFECLVELHASLPALIKY
Subjt:  EQLLNWIFECLVELHASLPALIKY

A0A6J1GZL7 ATP-dependent DNA helicase At3g02060, chloroplastic0.0e+0091.87Show/hide
Query:  LLSPAPDVSSSPPVLPFKLCSFPTLRGWGLFNRNSTFRHFPNRCVSITNVVYAEDVIVPGTAKSSRRRDQIELERDSISLLNERILRFHGKRDSSRTAMD
        LL P  DVSSS P++ F+L SFP L  WGLFNRN   RHF  RCVSITNVVYAEDV+VPG AKS+RRR+QIELE DSI++LNERI RFH KR+SS+TAMD
Subjt:  LLSPAPDVSSSPPVLPFKLCSFPTLRGWGLFNRNSTFRHFPNRCVSITNVVYAEDVIVPGTAKSSRRRDQIELERDSISLLNERILRFHGKRDSSRTAMD

Query:  SEEADRYIQMVKEQQQRGLQKLKGDRQRKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAIEYVFIEYADGMAKLPVKQASRMLYRY
        +EEADRYIQMVKEQQQRGLQKLKG+RQ+KESDG++YKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTE  EYVFIEYADGMAKL VKQASRMLYRY
Subjt:  SEEADRYIQMVKEQQQRGLQKLKGDRQRKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAIEYVFIEYADGMAKLPVKQASRMLYRY

Query:  SLPNENKRPRTLSKLNDTTTWEKRKTKGKIAIQKMVVDLMELYLHRLKQRRSPYPKCSAMKEFSAQFPYEPTVDQKEAFRDVEKDLTGRETPMDRLICGD
        SLPNENKRPRTLSKLNDTTTWEKRKTKGKIAIQKMVVDLMELYLHRLKQRR PYPKCSAM+EF+AQF Y PTVDQKEAFRDVEKDLT RETPMDRLICGD
Subjt:  SLPNENKRPRTLSKLNDTTTWEKRKTKGKIAIQKMVVDLMELYLHRLKQRRSPYPKCSAMKEFSAQFPYEPTVDQKEAFRDVEKDLTGRETPMDRLICGD

Query:  VGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFSDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVV
        VGFGKTEVALRAIF VVSAGKQAMVLAPTIVLAKQHFEVIT RFSSF DVQIGLLSRFQTK+EK+KHLEMIKEGQLNI+VGTHSLLGDRVVYSNLGLLVV
Subjt:  VGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFSDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVV

Query:  DEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKEF
        DEEQRFGVKQKEKIASFKTS+DVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKV SAIKYELERGGQVFYV PRIKGLEEVK+F
Subjt:  DEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKEF

Query:  LEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDDALE
        LEASFPDIEI LAHGKQYSKQLEETMENFALG IKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEA+AYLFYPDK+LLSD ALE
Subjt:  LEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDDALE

Query:  RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILNGAE
        RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQ+GDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKI+NGAE
Subjt:  RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILNGAE

Query:  RAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGIFRIYASGKTVCMETNMNKKVFKLISDSMTSEVHRNCLSFEEHQIKAGLLLELPR
        +AAETDIW LMQFTENLRR HGKEPYSMEILLKKLYVRRMAADLGI+RIYASGKTVCMET MNKKVFKLIS+SM SEVHRNCL+FEEHQIKAGLLLELPR
Subjt:  RAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGIFRIYASGKTVCMETNMNKKVFKLISDSMTSEVHRNCLSFEEHQIKAGLLLELPR

Query:  EQLLNWIFECLVELHASLPALIKY
        EQLLNWIFECLVELHASLPALIKY
Subjt:  EQLLNWIFECLVELHASLPALIKY

A0A6J1JT22 ATP-dependent DNA helicase At3g02060, chloroplastic0.0e+0091.63Show/hide
Query:  LLSPAPDVSSSPPVLPFKLCSFPTLRGWGLFNRNSTFRHFPNRCVSITNVVYAEDVIVPGTAKSSRRRDQIELERDSISLLNERILRFHGKRDSSRTAMD
        LL P  DVSSS P++ F+L SFP L  WGLFNRN   RH   R VSITNVVYAEDV+V GTAKS+RRR+QIELERDSI++LNERI RFH KR+SS+TAMD
Subjt:  LLSPAPDVSSSPPVLPFKLCSFPTLRGWGLFNRNSTFRHFPNRCVSITNVVYAEDVIVPGTAKSSRRRDQIELERDSISLLNERILRFHGKRDSSRTAMD

Query:  SEEADRYIQMVKEQQQRGLQKLKGDRQRKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAIEYVFIEYADGMAKLPVKQASRMLYRY
        + EADRYIQMVKEQQQRGLQKLKG+R++KESDG++YKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTE  EYVFIEYADGMAKL VKQASRMLYRY
Subjt:  SEEADRYIQMVKEQQQRGLQKLKGDRQRKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAIEYVFIEYADGMAKLPVKQASRMLYRY

Query:  SLPNENKRPRTLSKLNDTTTWEKRKTKGKIAIQKMVVDLMELYLHRLKQRRSPYPKCSAMKEFSAQFPYEPTVDQKEAFRDVEKDLTGRETPMDRLICGD
        SLPNENKRPRTLSKLNDTTTWEKRKTKGKIAIQKMVVDLMELYLHRLKQRR PYPKCSAM+EF+AQF Y PTVDQKEAFRDVEKDLT RETPMDRLICGD
Subjt:  SLPNENKRPRTLSKLNDTTTWEKRKTKGKIAIQKMVVDLMELYLHRLKQRRSPYPKCSAMKEFSAQFPYEPTVDQKEAFRDVEKDLTGRETPMDRLICGD

Query:  VGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFSDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVV
        VGFGKTEVALRAIF VVSAGKQAMVLAPTIVLAKQHFEVITQRFSSF DVQIGLLSRFQTK+EK+KHLEMIKEGQLNI+VGTHSLLGDRVVYSNLGLLVV
Subjt:  VGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFSDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVV

Query:  DEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKEF
        DEEQRFGVKQKEKIASFKTS+DVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLS+FSKEKVKSAIKYELERGGQVFYV PRIKGLEEVK+F
Subjt:  DEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKEF

Query:  LEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDDALE
        LEASFPDIEI LAHGKQYSKQLEETMENF+LG IKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEA+AYLFYPDK+LLSD ALE
Subjt:  LEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDDALE

Query:  RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILNGAE
        RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQ+GDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKI+NGAE
Subjt:  RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILNGAE

Query:  RAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGIFRIYASGKTVCMETNMNKKVFKLISDSMTSEVHRNCLSFEEHQIKAGLLLELPR
        +AAETDIW LMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGI+RIYASGKTVCMET MNKKVFKLIS+SM SEVHRNCL+FEEHQIKAGLLLELPR
Subjt:  RAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGIFRIYASGKTVCMETNMNKKVFKLISDSMTSEVHRNCLSFEEHQIKAGLLLELPR

Query:  EQLLNWIFECLVELHASLPALIKY
        EQLLNWIFECLVELHASLPALIKY
Subjt:  EQLLNWIFECLVELHASLPALIKY

SwissProt top hitse value%identityAlignment
F4JFJ3 ATP-dependent DNA helicase At3g02060, chloroplastic0.0e+0078.23Show/hide
Query:  LSPAPDVSSSPPVLPFKLCSFPTLRGWGLFNRNSTFRHFPNRCVSITNVVYAEDVIVPGTAKSSRRRDQIEL-ERDSISLLNERILRFHGKRDSSRTAMD
        L P PD  + P VL  KLCSFP  R   LF+     R F  +  S+  +V A   +    AK +R R++ EL E DSISLLNERI R  GKR+++R AMD
Subjt:  LSPAPDVSSSPPVLPFKLCSFPTLRGWGLFNRNSTFRHFPNRCVSITNVVYAEDVIVPGTAKSSRRRDQIEL-ERDSISLLNERILRFHGKRDSSRTAMD

Query:  SEEADRYIQMVKEQQQRGLQKLKGDRQRKESDG---FNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAIEYVFIEYADGMAKLPVKQASRML
        SEEA++YI MVKEQQ+RGLQKLKG RQ  ++ G   F+YKVDPY+L SGDYVVHKKVGIGRFVGIKFDV K S+E +EYVFIEYADGMAKLP+KQASR+L
Subjt:  SEEADRYIQMVKEQQQRGLQKLKGDRQRKESDG---FNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAIEYVFIEYADGMAKLPVKQASRML

Query:  YRYSLPNENKRPRTLSKLNDTTTWEKRKTKGKIAIQKMVVDLMELYLHRLKQRRSPYPKCSAMKEFSAQFPYEPTVDQKEAFRDVEKDLTGRETPMDRLI
        YRY+LPNE KRPRTLS+L+DT+ WE+RKTKGK+AIQKMVVDLMELYLHRL+Q+R PYPK   M +F+AQFPY  T DQK+AF DVEKDLT RETPMDRLI
Subjt:  YRYSLPNENKRPRTLSKLNDTTTWEKRKTKGKIAIQKMVVDLMELYLHRLKQRRSPYPKCSAMKEFSAQFPYEPTVDQKEAFRDVEKDLTGRETPMDRLI

Query:  CGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFSDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL
        CGDVGFGKTEVALRAIFCVVS GKQAMVLAPTIVLAKQH++VI++RFS +  +++GLLSRFQTKAEKE++LEMIK G LNIIVGTHSLLG RVVYSNLGL
Subjt:  CGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFSDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL

Query:  LVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEV
        LVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLI+TPPPER+PIKTHLSSF KEKV  AIK EL+RGGQVFYVLPRIKGLEEV
Subjt:  LVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEV

Query:  KEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDD
         +FLE +FPDI+IA+AHGKQYSKQLEETME FA G IKILICTNIVESGLDIQNANTII+QDVQQFGLAQLYQLRGRVGRADKEA+AYLFYPDKSLLSD 
Subjt:  KEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDD

Query:  ALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILN
        ALERL+ALEECRELGQGFQLAE+DMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLF+SLSKV+E R+ SVPY  VKIDI+INP LPSEY+NYLENPM+I++
Subjt:  ALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILN

Query:  GAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGIFRIYASGKTVCMETNMNKKVFKLISDSMTSEVHRNCLSFEEHQIKAGLLLE
         AE+AAE D+W+LMQFTENLRR +GKEPYSMEI+LKKLYVRRMAADLG+ RIYASGK V M+TNM+KKVFKLI+DSMT +V+R+ L +E  QI A LLLE
Subjt:  GAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGIFRIYASGKTVCMETNMNKKVFKLISDSMTSEVHRNCLSFEEHQIKAGLLLE

Query:  LPREQLLNWIFECLVELHASLPALIKY
        LPREQLLNW+F+CL ELHASLPALIKY
Subjt:  LPREQLLNWIFECLVELHASLPALIKY

Q49V12 Transcription-repair-coupling factor4.9e-12239.02Show/hide
Query:  YIQMVKEQQQRGLQKLKGDRQRKESDGFN--YKVDPY-TLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAIEYVFIEY-ADGMAKLPVKQASRMLYRYSL
        Y+Q+V    +R L K K  ++ K+        K+  Y  L+ GDYVVH   G+GR++G++  ++ G     +Y+ ++Y       +PV Q  ++  +  +
Subjt:  YIQMVKEQQQRGLQKLKGDRQRKESDGFN--YKVDPY-TLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAIEYVFIEY-ADGMAKLPVKQASRMLYRYSL

Query:  PNENKRPRTLSKLNDTTTWEKRKTKGKIAIQKMVVDLMELYLHRLKQRRSPY-PKCSAMKEFSAQFPYEPTVDQKEAFRDVEKDLTGRETPMDRLICGDV
         +E+K P+ L+KL   T W+K K K + +++ M  +L+ELY  R       + P  +   +F   FPYE T DQ ++  ++++D+   E PMDRL+CGDV
Subjt:  PNENKRPRTLSKLNDTTTWEKRKTKGKIAIQKMVVDLMELYLHRLKQRRSPY-PKCSAMKEFSAQFPYEPTVDQKEAFRDVEKDLTGRETPMDRLICGDV

Query:  GFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFSDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVD
        G+GKTEVA+RA F  V  GKQ   L PT +LA+QH+E + +R   F  +++ L+SRF+T  E ++  E +K G ++I+VGTH LLG  + Y +LGLL+VD
Subjt:  GFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFSDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVD

Query:  EEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKEFL
        EEQRFGV+ KE+I S K +VDVLTL+ATPIPRTL++++ G RD S+I TPP  R P++T++   +   +K A++ EL R GQVFY+  +++ + E +E L
Subjt:  EEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKEFL

Query:  EASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDDALER
        +   PD  I +AHG+   + LEETM +F   +  I++ T I+E+G+D+ NANT+I++D  +FGL+QLYQLRGRVGR+ +  YAY  +P   +LS+ A +R
Subjt:  EASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDDALER

Query:  LAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILNGAER
        L A++E  ELG GF++A RD+ IRG G + G+QQ G + +VG DL+ +ML +++++    +        ++I+++I+ +LP+EYI   ++ ++I     +
Subjt:  LAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILNGAER

Query:  -AAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGIFRIYASGKTV
          +ET    LM   + L       P  +E LL+ + ++  A   G+  I   GK V
Subjt:  -AAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGIFRIYASGKTV

Q4L3G0 Transcription-repair-coupling factor8.4e-12239.54Show/hide
Query:  YIQMVKEQQQRGLQKLKGDRQRKESDGFN--YKVDPY-TLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAIEYVFIEY-ADGMAKLPVKQASRMLYRYSL
        Y+Q+V    +R L K K  +QRK +   +   K+  Y  L  GDYVVH   G+GR++G++  ++ G     +Y+ ++Y       +PV Q  ++  +  +
Subjt:  YIQMVKEQQQRGLQKLKGDRQRKESDGFN--YKVDPY-TLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAIEYVFIEY-ADGMAKLPVKQASRMLYRYSL

Query:  PNENKRPRTLSKLNDTTTWEKRKTKGKIAIQKMVVDLMELYLHRLKQRRSPYPKCSA-MKEFSAQFPYEPTVDQKEAFRDVEKDLTGRETPMDRLICGDV
         +E+K P+ L+KL   + W+K K K + +++ +  +L+ LY  R       Y + +A    F   FPYE T DQ ++  +++ D+  RE PMDRL+CGDV
Subjt:  PNENKRPRTLSKLNDTTTWEKRKTKGKIAIQKMVVDLMELYLHRLKQRRSPYPKCSA-MKEFSAQFPYEPTVDQKEAFRDVEKDLTGRETPMDRLICGDV

Query:  GFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFSDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVD
        G+GKTEVA+RA F  V  GKQ   L PT +LA+QH+E + +R   F  VQI L+SRF++  E ++  E +K G ++I+VGTH LLG  + Y +LGLL+VD
Subjt:  GFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFSDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVD

Query:  EEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKEFL
        EEQRFGV+ KE+I + KT+VDVLTL+ATPIPRTL++++ G RD S+I TPP  R P++T++   +   +K A++ EL R GQVFY+  R++ + E +E L
Subjt:  EEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKEFL

Query:  EASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDDALER
        +   PD  IA+AHG+   + LEETM +F  G+  IL+ T I+E+G+D+ NANT+I+++  +FGL+QLYQLRGRVGR+ +  YAY  +    +L++ A ER
Subjt:  EASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDDALER

Query:  LAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILNGAER
        L A++E  ELG GF++A RD+ IRG G + G+QQ G + +VG DL+ +ML +++++    +        V+++++++ +LP+EYI   +  ++I     R
Subjt:  LAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILNGAER

Query:  AAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGIFRIYASGKTV
          ET+   L    + L       P  +E LL+ + ++  A   G+  I   GK +
Subjt:  AAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGIFRIYASGKTV

Q55750 Transcription-repair-coupling factor9.5e-15044.51Show/hide
Query:  RKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAIEYVFIEYADGMAKLPVKQASRMLYRYSLPNENKRPRTLSKLNDTTTWEKRKTK
        RK     + +VD   L  GDYVVHK  GIG+F  +K D         EY+ I+YADG+ ++P       L R+   +   RP  L K+     WE  K K
Subjt:  RKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAIEYVFIEYADGMAKLPVKQASRMLYRYSLPNENKRPRTLSKLNDTTTWEKRKTK

Query:  GKIAIQKMVVDLMELYLHRLKQRRSPYPKCSA-MKEFSAQFPYEPTVDQKEAFRDVEKDLTGRETPMDRLICGDVGFGKTEVALRAIFCVVSAG-KQAMV
         + A++K+ VDL+ LY  R KQ    YP  S   +E    FPY+PT DQ +A +DV++DL G + PMDRL+CGDVGFGKTEVA+RAIF  V++G KQ  +
Subjt:  GKIAIQKMVVDLMELYLHRLKQRRSPYPKCSA-MKEFSAQFPYEPTVDQKEAFRDVEKDLTGRETPMDRLICGDVGFGKTEVALRAIFCVVSAG-KQAMV

Query:  LAPTIVLAKQHFEVITQRFSSFSDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSVDVLT
        LAPT VL +QH+  + +RF+ +  + IGLL+RF+T +EK++ L  +K G+L+I+VGT  +LG  V + +LGLLV+DEEQRFGV QKEKI + KT VDVLT
Subjt:  LAPTIVLAKQHFEVITQRFSSFSDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSVDVLT

Query:  LSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKEFLEASFPDIEIALAHGKQYSKQLEET
        L+ATPIPRTLY++L+G R+ SLITTPPP R PIKTHLS ++ E +++AI+ EL+RGGQVFYV+PRI+G+EE+   L    P   IA+ HG+    +LE T
Subjt:  LSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKEFLEASFPDIEIALAHGKQYSKQLEET

Query:  MENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDDALERLAALEECRELGQGFQLAERDMGIR
        M  F  G+  IL+CT I+E+GLDI   NTIIV+D Q+FGLAQLYQLRGRVGR+  +A+A+L YP++  L++ A  RL AL+E  +LG G+QLA RDM IR
Subjt:  MENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDDALERLAALEECRELGQGFQLAERDMGIR

Query:  GFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILNGAERAAETDIWTLMQFTENLRRHHGKEP
        G G + G +Q+G +  +G + + EML D++ ++    +  V  +  +ID+ +   +PS+YI  LE  M           TD   L +   +    +G  P
Subjt:  GFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILNGAERAAETDIWTLMQFTENLRRHHGKEP

Query:  YSMEILLKKLYVRRMAADLGIFRIYASGK-TVCMETNMNKKVFKLISDSMTSEVHRNCLSFEEHQIKAGLLLELPREQLLNWI
          +E L K + ++ +A  LG  RI   GK  + +ET M +  +KL+++++ + +    +   +  +  GL +  P +Q+ N I
Subjt:  YSMEILLKKLYVRRMAADLGIFRIYASGK-TVCMETNMNKKVFKLISDSMTSEVHRNCLSFEEHQIKAGLLLELPREQLLNWI

Q5HRQ2 Transcription-repair-coupling factor9.3e-12139.24Show/hide
Query:  YIQMVKEQQQRGLQKLKGDRQRKESDGFN--YKVDPY-TLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAIEYVFIEY-ADGMAKLPVKQASRMLYRYSL
        Y+Q+V    +R L K +  +QRK +   +   K+  Y  L  GDY+VH   G+GR++G++  ++ G T   +Y+ ++Y       +PV Q  ++  +  +
Subjt:  YIQMVKEQQQRGLQKLKGDRQRKESDGFN--YKVDPY-TLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAIEYVFIEY-ADGMAKLPVKQASRMLYRYSL

Query:  PNENKRPRTLSKLNDTTTWEKRKTKGKIAIQKMVVDLMELYLHRLKQRRSPYPKCSA-MKEFSAQFPYEPTVDQKEAFRDVEKDLTGRETPMDRLICGDV
         +E+K PR L+KL   T W+K K K + +++ +  +L++LY  R       Y + +A    F   FPYE T DQ ++  +++ D+  R  PMDRL+CGDV
Subjt:  PNENKRPRTLSKLNDTTTWEKRKTKGKIAIQKMVVDLMELYLHRLKQRRSPYPKCSA-MKEFSAQFPYEPTVDQKEAFRDVEKDLTGRETPMDRLICGDV

Query:  GFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFSDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVD
        G+GKTEVA+RA F  V  GKQ   L PT +LA+QH+E + +R   F  V+I L+SRF+T  E  +  E +K G ++I+VGTH LLG  + Y +LGLL+VD
Subjt:  GFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFSDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVD

Query:  EEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKEFL
        EEQRFGV+ KE+I + K +VDVLTL+ATPIPRTL++++ G RD S+I TPP  R P++T++   +   +K A++ EL R GQVFY+  +++ + E +E L
Subjt:  EEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKEFL

Query:  EASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDDALER
        +   PD  IA+AHG+   + LEETM +F   +  IL+ T I+E+G+D+ NANT+I+++  +FGL+QLYQLRGRVGR+ +  YAY  +P   +L++ A ER
Subjt:  EASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDDALER

Query:  LAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILNGAER
        L A++E  ELG GF++A RD+ IRG G + G+QQ G + +VG DL+ +ML +++++    +  S     +++++ ++ +LP+EYI   +  ++I     R
Subjt:  LAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILNGAER

Query:  AAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGIFRIYASGKTV
          ET+   L    + L       P  +E LL  + ++  A   G+  I   GK++
Subjt:  AAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGIFRIYASGKTV

Arabidopsis top hitse value%identityAlignment
AT2G01440.1 DEAD/DEAH box RNA helicase family protein1.8e-5534.38Show/hide
Query:  KEFSAQFPYEPTVDQKEAFRDVEKDLTGRETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFSDVQ----IGLLS
        K F    PY  T  Q  A  ++  DL  R  PM+RL+ GDVG GKT VA  A   V+ +G QA  +APT +LA QH+E       +   V     IGLL+
Subjt:  KEFSAQFPYEPTVDQKEAFRDVEKDLTGRETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFSDVQ----IGLLS

Query:  RFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKI-----------------------ASFKTSVDVLTLSATPIPR
              +     + ++ G ++ I+GTHSL+ +++ YS L + VVDE+QRFGV Q+ K                        A    +  VL +SATPIPR
Subjt:  RFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKI-----------------------ASFKTSVDVLTLSATPIPR

Query:  TLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVK---SAIKYELERGGQVFYVLPRIKGLEEVKEFLEAS---------FPDIEIALAHGKQYSKQ
        +L LAL G    + IT  P  R+P++TH+   ++  +K   S +  +L+ GG+V+ V P I   E++ +   AS         FP     L HG+  S  
Subjt:  TLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVK---SAIKYELERGGQVFYVLPRIKGLEEVKEFLEAS---------FPDIEIALAHGKQYSKQ

Query:  LEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDDALERLAALEECRELGQGFQLAERD
         EE +  F  G+ +IL+ T ++E G+D+ +A+ ++V + ++FG+AQL+QLRGRVGR  +++        K LL   +   L  L    +   GF LA  D
Subjt:  LEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDDALERLAALEECRELGQGFQLAERD

Query:  MGIRGFGTIFGEQQTG
        + +RG G + G++Q+G
Subjt:  MGIRGFGTIFGEQQTG

AT3G02060.1 DEAD/DEAH box helicase, putative0.0e+0078.23Show/hide
Query:  LSPAPDVSSSPPVLPFKLCSFPTLRGWGLFNRNSTFRHFPNRCVSITNVVYAEDVIVPGTAKSSRRRDQIEL-ERDSISLLNERILRFHGKRDSSRTAMD
        L P PD  + P VL  KLCSFP  R   LF+     R F  +  S+  +V A   +    AK +R R++ EL E DSISLLNERI R  GKR+++R AMD
Subjt:  LSPAPDVSSSPPVLPFKLCSFPTLRGWGLFNRNSTFRHFPNRCVSITNVVYAEDVIVPGTAKSSRRRDQIEL-ERDSISLLNERILRFHGKRDSSRTAMD

Query:  SEEADRYIQMVKEQQQRGLQKLKGDRQRKESDG---FNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAIEYVFIEYADGMAKLPVKQASRML
        SEEA++YI MVKEQQ+RGLQKLKG RQ  ++ G   F+YKVDPY+L SGDYVVHKKVGIGRFVGIKFDV K S+E +EYVFIEYADGMAKLP+KQASR+L
Subjt:  SEEADRYIQMVKEQQQRGLQKLKGDRQRKESDG---FNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAIEYVFIEYADGMAKLPVKQASRML

Query:  YRYSLPNENKRPRTLSKLNDTTTWEKRKTKGKIAIQKMVVDLMELYLHRLKQRRSPYPKCSAMKEFSAQFPYEPTVDQKEAFRDVEKDLTGRETPMDRLI
        YRY+LPNE KRPRTLS+L+DT+ WE+RKTKGK+AIQKMVVDLMELYLHRL+Q+R PYPK   M +F+AQFPY  T DQK+AF DVEKDLT RETPMDRLI
Subjt:  YRYSLPNENKRPRTLSKLNDTTTWEKRKTKGKIAIQKMVVDLMELYLHRLKQRRSPYPKCSAMKEFSAQFPYEPTVDQKEAFRDVEKDLTGRETPMDRLI

Query:  CGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFSDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL
        CGDVGFGKTEVALRAIFCVVS GKQAMVLAPTIVLAKQH++VI++RFS +  +++GLLSRFQTKAEKE++LEMIK G LNIIVGTHSLLG RVVYSNLGL
Subjt:  CGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFSDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL

Query:  LVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEV
        LVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLI+TPPPER+PIKTHLSSF KEKV  AIK EL+RGGQVFYVLPRIKGLEEV
Subjt:  LVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEV

Query:  KEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDD
         +FLE +FPDI+IA+AHGKQYSKQLEETME FA G IKILICTNIVESGLDIQNANTII+QDVQQFGLAQLYQLRGRVGRADKEA+AYLFYPDKSLLSD 
Subjt:  KEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDD

Query:  ALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILN
        ALERL+ALEECRELGQGFQLAE+DMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLF+SLSKV+E R+ SVPY  VKIDI+INP LPSEY+NYLENPM+I++
Subjt:  ALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILN

Query:  GAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGIFRIYASGKTVCMETNMNKKVFKLISDSMTSEVHRNCLSFEEHQIKAGLLLE
         AE+AAE D+W+LMQFTENLRR +GKEPYSMEI+LKKLYVRRMAADLG+ RIYASGK V M+TNM+KKVFKLI+DSMT +V+R+ L +E  QI A LLLE
Subjt:  GAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGIFRIYASGKTVCMETNMNKKVFKLISDSMTSEVHRNCLSFEEHQIKAGLLLE

Query:  LPREQLLNWIFECLVELHASLPALIKY
        LPREQLLNW+F+CL ELHASLPALIKY
Subjt:  LPREQLLNWIFECLVELHASLPALIKY

AT3G02060.2 DEAD/DEAH box helicase, putative0.0e+0078.23Show/hide
Query:  LSPAPDVSSSPPVLPFKLCSFPTLRGWGLFNRNSTFRHFPNRCVSITNVVYAEDVIVPGTAKSSRRRDQIEL-ERDSISLLNERILRFHGKRDSSRTAMD
        L P PD  + P VL  KLCSFP  R   LF+     R F  +  S+  +V A   +    AK +R R++ EL E DSISLLNERI R  GKR+++R AMD
Subjt:  LSPAPDVSSSPPVLPFKLCSFPTLRGWGLFNRNSTFRHFPNRCVSITNVVYAEDVIVPGTAKSSRRRDQIEL-ERDSISLLNERILRFHGKRDSSRTAMD

Query:  SEEADRYIQMVKEQQQRGLQKLKGDRQRKESDG---FNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAIEYVFIEYADGMAKLPVKQASRML
        SEEA++YI MVKEQQ+RGLQKLKG RQ  ++ G   F+YKVDPY+L SGDYVVHKKVGIGRFVGIKFDV K S+E +EYVFIEYADGMAKLP+KQASR+L
Subjt:  SEEADRYIQMVKEQQQRGLQKLKGDRQRKESDG---FNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAIEYVFIEYADGMAKLPVKQASRML

Query:  YRYSLPNENKRPRTLSKLNDTTTWEKRKTKGKIAIQKMVVDLMELYLHRLKQRRSPYPKCSAMKEFSAQFPYEPTVDQKEAFRDVEKDLTGRETPMDRLI
        YRY+LPNE KRPRTLS+L+DT+ WE+RKTKGK+AIQKMVVDLMELYLHRL+Q+R PYPK   M +F+AQFPY  T DQK+AF DVEKDLT RETPMDRLI
Subjt:  YRYSLPNENKRPRTLSKLNDTTTWEKRKTKGKIAIQKMVVDLMELYLHRLKQRRSPYPKCSAMKEFSAQFPYEPTVDQKEAFRDVEKDLTGRETPMDRLI

Query:  CGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFSDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL
        CGDVGFGKTEVALRAIFCVVS GKQAMVLAPTIVLAKQH++VI++RFS +  +++GLLSRFQTKAEKE++LEMIK G LNIIVGTHSLLG RVVYSNLGL
Subjt:  CGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFSDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL

Query:  LVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEV
        LVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLI+TPPPER+PIKTHLSSF KEKV  AIK EL+RGGQVFYVLPRIKGLEEV
Subjt:  LVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEV

Query:  KEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDD
         +FLE +FPDI+IA+AHGKQYSKQLEETME FA G IKILICTNIVESGLDIQNANTII+QDVQQFGLAQLYQLRGRVGRADKEA+AYLFYPDKSLLSD 
Subjt:  KEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDD

Query:  ALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILN
        ALERL+ALEECRELGQGFQLAE+DMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLF+SLSKV+E R+ SVPY  VKIDI+INP LPSEY+NYLENPM+I++
Subjt:  ALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILN

Query:  GAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGIFRIYASGKTVCMETNMNKKVFKLISDSMTSEVHRNCLSFEEHQIKAGLLLE
         AE+AAE D+W+LMQFTENLRR +GKEPYSMEI+LKKLYVRRMAADLG+ RIYASGK V M+TNM+KKVFKLI+DSMT +V+R+ L +E  QI A LLLE
Subjt:  GAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGIFRIYASGKTVCMETNMNKKVFKLISDSMTSEVHRNCLSFEEHQIKAGLLLE

Query:  LPREQLLNWIFECLVELHASLPALIKY
        LPREQLLNW+F+CL ELHASLPALIKY
Subjt:  LPREQLLNWIFECLVELHASLPALIKY

AT5G26742.1 DEAD box RNA helicase (RH3)3.5e-0625.83Show/hide
Query:  MVLAPTIVLAKQHFEVITQRFSSFSDVQI--GLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL-----LVVDE-EQRFGVKQKEKIA
        +VLAPT  LAKQ  + I +     S V +  G+    Q  A        +  G ++++VGT   + D +   +L L     LV+DE +Q   V  +E + 
Subjt:  MVLAPTIVLAKQHFEVITQRFSSFSDVQI--GLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL-----LVVDE-EQRFGVKQKEKIA

Query:  S----FKTSVDVLTLSATP-----------IPRTLYLALTGFRDASLITTPPPERVPI-KTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKE
        S      T    +  SAT            +   L + L G +D  L      E + +     +S SK  + S +     +GG+        +  +EV  
Subjt:  S----FKTSVDVLTLSATP-----------IPRTLYLALTGFRDASLITTPPPERVPI-KTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKE

Query:  FLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDDAL
         L  S   I     HG     Q E T+  F  G   +L+ T++   GLDI N + +I  ++       +++  GR GRA KE  A L +      +  +L
Subjt:  FLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDDAL

Query:  ER
        ER
Subjt:  ER

AT5G26742.2 DEAD box RNA helicase (RH3)3.5e-0625.83Show/hide
Query:  MVLAPTIVLAKQHFEVITQRFSSFSDVQI--GLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL-----LVVDE-EQRFGVKQKEKIA
        +VLAPT  LAKQ  + I +     S V +  G+    Q  A        +  G ++++VGT   + D +   +L L     LV+DE +Q   V  +E + 
Subjt:  MVLAPTIVLAKQHFEVITQRFSSFSDVQI--GLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL-----LVVDE-EQRFGVKQKEKIA

Query:  S----FKTSVDVLTLSATP-----------IPRTLYLALTGFRDASLITTPPPERVPI-KTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKE
        S      T    +  SAT            +   L + L G +D  L      E + +     +S SK  + S +     +GG+        +  +EV  
Subjt:  S----FKTSVDVLTLSATP-----------IPRTLYLALTGFRDASLITTPPPERVPI-KTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKE

Query:  FLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDDAL
         L  S   I     HG     Q E T+  F  G   +L+ T++   GLDI N + +I  ++       +++  GR GRA KE  A L +      +  +L
Subjt:  FLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDDAL

Query:  ER
        ER
Subjt:  ER


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTCCTTCTTTCACCTGCCCCAGATGTTTCCTCTTCCCCACCTGTACTACCCTTCAAACTCTGCTCATTTCCCACCCTACGGGGATGGGGACTCTTCAATCGCAA
CTCTACCTTCCGCCATTTTCCTAACCGATGTGTTTCCATTACTAATGTTGTCTATGCCGAAGATGTTATAGTTCCCGGTACCGCCAAATCCTCGAGGAGGAGAGACCAAA
TTGAGCTTGAACGAGACTCTATCTCGCTCCTCAATGAGAGAATTCTCCGATTTCACGGGAAGAGGGATTCCTCGAGAACCGCTATGGACTCCGAGGAGGCGGACCGGTAC
ATTCAGATGGTGAAGGAGCAGCAGCAAAGGGGTTTGCAGAAGTTGAAAGGGGATAGACAAAGGAAAGAGAGCGATGGGTTTAATTATAAGGTTGATCCTTATACGCTTCG
TTCTGGGGATTATGTTGTGCATAAGAAGGTTGGTATTGGCCGATTTGTTGGGATTAAGTTTGATGTTCAGAAAGGTTCTACGGAGGCTATTGAGTATGTCTTCATCGAGT
ACGCTGATGGGATGGCGAAGCTTCCTGTTAAGCAGGCGTCTCGAATGCTGTATCGCTATAGTCTGCCAAATGAAAACAAAAGACCTCGCACATTGAGCAAATTAAATGAT
ACTACCACATGGGAAAAAAGAAAGACTAAGGGAAAAATTGCGATTCAGAAAATGGTTGTTGACTTGATGGAATTGTATCTACATAGGTTGAAACAGAGAAGGTCTCCCTA
TCCGAAGTGTTCGGCTATGAAAGAATTTTCTGCCCAGTTTCCTTACGAGCCTACAGTGGACCAAAAGGAGGCTTTCAGAGATGTAGAGAAAGATTTGACTGGGAGGGAAA
CTCCGATGGACAGATTGATTTGTGGAGATGTTGGCTTTGGTAAAACTGAAGTTGCATTGCGTGCAATCTTCTGTGTGGTCTCGGCAGGAAAGCAAGCTATGGTTCTAGCA
CCAACAATAGTCCTTGCCAAACAACATTTTGAAGTTATCACACAAAGGTTTTCTTCATTTTCTGATGTCCAGATTGGATTGTTGAGCAGGTTCCAGACAAAAGCAGAGAA
AGAAAAGCATCTTGAAATGATCAAAGAAGGTCAATTGAATATTATTGTTGGGACTCATTCACTCCTTGGAGATCGTGTTGTATATAGTAATTTAGGGCTTCTAGTTGTTG
ATGAGGAACAGAGGTTTGGTGTCAAACAGAAGGAGAAAATTGCATCCTTTAAAACTTCAGTTGATGTTCTCACTCTCTCCGCAACACCAATACCCCGGACCCTATATTTA
GCATTGACTGGATTTCGTGATGCTAGCTTGATTACAACTCCACCTCCAGAAAGAGTCCCAATAAAAACCCATCTCTCATCATTCAGTAAAGAAAAAGTGAAATCAGCTAT
TAAATATGAGCTGGAACGTGGAGGCCAAGTTTTTTATGTTTTACCTCGAATTAAAGGACTTGAAGAAGTGAAGGAATTTCTTGAGGCGAGCTTTCCAGATATTGAAATAG
CACTTGCTCATGGAAAGCAATATTCAAAGCAACTTGAAGAAACCATGGAAAATTTTGCACTTGGTGATATTAAGATTCTTATTTGCACAAATATTGTTGAAAGTGGTTTG
GATATTCAAAATGCAAACACCATCATTGTTCAGGATGTTCAACAATTTGGGTTAGCCCAATTATATCAGCTGCGTGGACGAGTGGGCCGGGCTGACAAGGAAGCATATGC
ATACTTATTTTACCCAGACAAGTCTCTGCTATCTGACGATGCACTGGAAAGGCTTGCTGCTCTTGAAGAGTGCCGTGAACTTGGGCAAGGTTTTCAACTTGCTGAGAGAG
ACATGGGCATACGAGGATTTGGTACCATCTTTGGCGAGCAACAAACTGGTGATGTTGGAAATGTGGGCATTGATCTATTCTTTGAAATGCTTTTCGACAGCTTATCCAAG
GTTGACGAACACAGGGTAGTCTCTGTCCCATACCAGTCAGTGAAGATTGATATCGATATTAATCCTCATCTGCCTTCTGAGTACATTAATTATTTGGAGAATCCCATGAA
AATACTTAATGGAGCTGAGAGAGCAGCTGAGACAGACATTTGGACTTTAATGCAATTTACTGAGAATTTACGCCGTCATCATGGAAAAGAGCCGTATTCCATGGAGATTC
TCCTGAAGAAGCTTTATGTGAGAAGAATGGCAGCGGATCTAGGAATTTTTCGGATATATGCTTCTGGAAAGACTGTTTGCATGGAAACTAACATGAACAAGAAAGTTTTC
AAGTTGATATCAGATTCGATGACATCAGAGGTGCATCGGAATTGTTTGTCTTTTGAGGAACATCAGATCAAGGCTGGTCTTCTCTTAGAGCTACCCAGAGAACAACTGCT
AAATTGGATCTTTGAGTGTTTGGTGGAACTTCATGCTTCCCTCCCAGCCCTAATCAAATACTAG
mRNA sequenceShow/hide mRNA sequence
ATCCAAAAACCCCTCCAAAACCTCCCCCACTATTATCCTCAAACCTCTCTTCCATTTCTTCAATGGCGGAATTTCCATCTCCATCATCGTTTTCACTTCCTTAACCTCCT
TACTACTCACTCCTCTTCTTCTACTCTCTTACCTTATTCTTCAATGGCTTTCCTTCTTTCACCTGCCCCAGATGTTTCCTCTTCCCCACCTGTACTACCCTTCAAACTCT
GCTCATTTCCCACCCTACGGGGATGGGGACTCTTCAATCGCAACTCTACCTTCCGCCATTTTCCTAACCGATGTGTTTCCATTACTAATGTTGTCTATGCCGAAGATGTT
ATAGTTCCCGGTACCGCCAAATCCTCGAGGAGGAGAGACCAAATTGAGCTTGAACGAGACTCTATCTCGCTCCTCAATGAGAGAATTCTCCGATTTCACGGGAAGAGGGA
TTCCTCGAGAACCGCTATGGACTCCGAGGAGGCGGACCGGTACATTCAGATGGTGAAGGAGCAGCAGCAAAGGGGTTTGCAGAAGTTGAAAGGGGATAGACAAAGGAAAG
AGAGCGATGGGTTTAATTATAAGGTTGATCCTTATACGCTTCGTTCTGGGGATTATGTTGTGCATAAGAAGGTTGGTATTGGCCGATTTGTTGGGATTAAGTTTGATGTT
CAGAAAGGTTCTACGGAGGCTATTGAGTATGTCTTCATCGAGTACGCTGATGGGATGGCGAAGCTTCCTGTTAAGCAGGCGTCTCGAATGCTGTATCGCTATAGTCTGCC
AAATGAAAACAAAAGACCTCGCACATTGAGCAAATTAAATGATACTACCACATGGGAAAAAAGAAAGACTAAGGGAAAAATTGCGATTCAGAAAATGGTTGTTGACTTGA
TGGAATTGTATCTACATAGGTTGAAACAGAGAAGGTCTCCCTATCCGAAGTGTTCGGCTATGAAAGAATTTTCTGCCCAGTTTCCTTACGAGCCTACAGTGGACCAAAAG
GAGGCTTTCAGAGATGTAGAGAAAGATTTGACTGGGAGGGAAACTCCGATGGACAGATTGATTTGTGGAGATGTTGGCTTTGGTAAAACTGAAGTTGCATTGCGTGCAAT
CTTCTGTGTGGTCTCGGCAGGAAAGCAAGCTATGGTTCTAGCACCAACAATAGTCCTTGCCAAACAACATTTTGAAGTTATCACACAAAGGTTTTCTTCATTTTCTGATG
TCCAGATTGGATTGTTGAGCAGGTTCCAGACAAAAGCAGAGAAAGAAAAGCATCTTGAAATGATCAAAGAAGGTCAATTGAATATTATTGTTGGGACTCATTCACTCCTT
GGAGATCGTGTTGTATATAGTAATTTAGGGCTTCTAGTTGTTGATGAGGAACAGAGGTTTGGTGTCAAACAGAAGGAGAAAATTGCATCCTTTAAAACTTCAGTTGATGT
TCTCACTCTCTCCGCAACACCAATACCCCGGACCCTATATTTAGCATTGACTGGATTTCGTGATGCTAGCTTGATTACAACTCCACCTCCAGAAAGAGTCCCAATAAAAA
CCCATCTCTCATCATTCAGTAAAGAAAAAGTGAAATCAGCTATTAAATATGAGCTGGAACGTGGAGGCCAAGTTTTTTATGTTTTACCTCGAATTAAAGGACTTGAAGAA
GTGAAGGAATTTCTTGAGGCGAGCTTTCCAGATATTGAAATAGCACTTGCTCATGGAAAGCAATATTCAAAGCAACTTGAAGAAACCATGGAAAATTTTGCACTTGGTGA
TATTAAGATTCTTATTTGCACAAATATTGTTGAAAGTGGTTTGGATATTCAAAATGCAAACACCATCATTGTTCAGGATGTTCAACAATTTGGGTTAGCCCAATTATATC
AGCTGCGTGGACGAGTGGGCCGGGCTGACAAGGAAGCATATGCATACTTATTTTACCCAGACAAGTCTCTGCTATCTGACGATGCACTGGAAAGGCTTGCTGCTCTTGAA
GAGTGCCGTGAACTTGGGCAAGGTTTTCAACTTGCTGAGAGAGACATGGGCATACGAGGATTTGGTACCATCTTTGGCGAGCAACAAACTGGTGATGTTGGAAATGTGGG
CATTGATCTATTCTTTGAAATGCTTTTCGACAGCTTATCCAAGGTTGACGAACACAGGGTAGTCTCTGTCCCATACCAGTCAGTGAAGATTGATATCGATATTAATCCTC
ATCTGCCTTCTGAGTACATTAATTATTTGGAGAATCCCATGAAAATACTTAATGGAGCTGAGAGAGCAGCTGAGACAGACATTTGGACTTTAATGCAATTTACTGAGAAT
TTACGCCGTCATCATGGAAAAGAGCCGTATTCCATGGAGATTCTCCTGAAGAAGCTTTATGTGAGAAGAATGGCAGCGGATCTAGGAATTTTTCGGATATATGCTTCTGG
AAAGACTGTTTGCATGGAAACTAACATGAACAAGAAAGTTTTCAAGTTGATATCAGATTCGATGACATCAGAGGTGCATCGGAATTGTTTGTCTTTTGAGGAACATCAGA
TCAAGGCTGGTCTTCTCTTAGAGCTACCCAGAGAACAACTGCTAAATTGGATCTTTGAGTGTTTGGTGGAACTTCATGCTTCCCTCCCAGCCCTAATCAAATACTAGCTC
TTTTTACAGCAGATTTTACAATGATTTTCTTATTCACATGGTTGGTACATGCATATAACATCCATTCATCAGGCTTATTATTTTAAAAGCCTGAAATATAGGCTCATTTT
CAACGGTCTCTGATCAAGAAGCTTTTGACATGGAAGAACTCAAATCATGATATGCAATACCAAGAAAAGGTATATACATTTTGTTAGTAAGTAGGAACAAGCTGATGGAA
GCCACTCAAGAGAATAGTTTCAAGGACACAAGCTGTGTAGCTATCTGTCCAAAATATATGCCAGTGTGCAGGATCTGATCGTGTATATGAGTTATGATGATATCGATACT
CCGAGAATGGCTAAGACTTCACTCAGGTCATAATTTGTTCTGTCCCCTTACCCTTGTGTCTATATATAATATTCATTAAATCTTGGTATCAAGTAGTTGGATTAGAAGCA
CAGTTCTGTTTTATTCTCATCCTAACTTTCACCTCTAATTTATTGCAAAATTTCTATACATGAGATGAGGGTATGTTGTAAAGAAACTATAAGTTTGCAACTCTAAAAAG
TTTTGGTAAGGGTTGAAGTAGGAACCATCAGACAGAG
Protein sequenceShow/hide protein sequence
MAFLLSPAPDVSSSPPVLPFKLCSFPTLRGWGLFNRNSTFRHFPNRCVSITNVVYAEDVIVPGTAKSSRRRDQIELERDSISLLNERILRFHGKRDSSRTAMDSEEADRY
IQMVKEQQQRGLQKLKGDRQRKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAIEYVFIEYADGMAKLPVKQASRMLYRYSLPNENKRPRTLSKLND
TTTWEKRKTKGKIAIQKMVVDLMELYLHRLKQRRSPYPKCSAMKEFSAQFPYEPTVDQKEAFRDVEKDLTGRETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLA
PTIVLAKQHFEVITQRFSSFSDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYL
ALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGL
DIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDDALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSK
VDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILNGAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGIFRIYASGKTVCMETNMNKKVF
KLISDSMTSEVHRNCLSFEEHQIKAGLLLELPREQLLNWIFECLVELHASLPALIKY