CuGenDBv2

Gene ID	CSPIUnG00170
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	ethylene-responsive transcription factor LEP
Genome location	Scaffold000091:219456..219970
RNA-Seq Expression	CSPIUnG00170
Synteny	CSPIUnG00170
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0005634 - nucleus (cellular component) GO:0003677 - DNA binding (molecular function) GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0066104.1 ethylene-responsive transcription factor LEP [Cucumis melo var. makuwa]

9.0e-76

86.47

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Query:  SAIAYDRAARSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQPPLFLPLLPPTPPSLLHQFPPAGDSPSGIISGDYD-ASAELPPFPPAISSESVDCDY
        +AIAYDRAARSLRGSLARTNFLYSDSPPPPPP YSASI HP+QPPLFLPLLPP PP L HQFPPAGDSPSGII GDYD +SAELPPFPPAISSES +CDY
Subjt:  SAIAYDRAARSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQPPLFLPLLPPTPPSLLHQFPPAGDSPSGIISGDYD-ASAELPPFPPAISSESVDCDY

Query:  NNYGVMESQNVGFECFDQSSIGIGSCLGFDSSSDYIYNPTLGSMPTVSDAGAGDFESPAGNFYLPQSSDY
        NNYG MESQNVGFECFDQSSIG+GSCLGFDSS DY+YNP LGSM TVSDAG GD +SPA NFYLPQSS+Y
Subjt:  NNYGVMESQNVGFECFDQSSIGIGSCLGFDSSSDYIYNPTLGSMPTVSDAGAGDFESPAGNFYLPQSSDY

KAE8648382.1 hypothetical protein Csa_023201, partial [Cucumis sativus]

2.6e-75

88.17

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Query:  SAIAYDRAARSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQPPLFLPLLPPTPPSLLHQFPPAGDSPSGIISGDYDASAELPPFPPAISSESVDCDYN
        +AIAYDRAARSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQPPLF               PPAGDS SGIISGDYDASAELPPF PAISSESVDCDYN
Subjt:  SAIAYDRAARSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQPPLFLPLLPPTPPSLLHQFPPAGDSPSGIISGDYDASAELPPFPPAISSESVDCDYN

Query:  NYGVMESQNVGFECFDQSSIGIGSCLGFDSSSDYIYNPTLGSMPTVSDAGAGDFESPAGNFYLPQSSDY
        NYGVMESQNVGFECFDQSSIGIGSCLGFDSSSDYIYNP LGSMPTVSD GAGDFESPAGNFYLPQSSDY
Subjt:  NYGVMESQNVGFECFDQSSIGIGSCLGFDSSSDYIYNPTLGSMPTVSDAGAGDFESPAGNFYLPQSSDY

XP_004151396.2 ethylene-responsive transcription factor LEP-like [Cucumis sativus]

2.6e-75

88.17

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Query:  SAIAYDRAARSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQPPLFLPLLPPTPPSLLHQFPPAGDSPSGIISGDYDASAELPPFPPAISSESVDCDYN
        +AIAYDRAARSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQPPLF               PPAGDS SGIISGDYDASAELPPF PAISSESVDCDYN
Subjt:  SAIAYDRAARSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQPPLFLPLLPPTPPSLLHQFPPAGDSPSGIISGDYDASAELPPFPPAISSESVDCDYN

Query:  NYGVMESQNVGFECFDQSSIGIGSCLGFDSSSDYIYNPTLGSMPTVSDAGAGDFESPAGNFYLPQSSDY
        NYGVMESQNVGFECFDQSSIGIGSCLGFDSSSDYIYNP LGSMPTVSD GAGDFESPAGNFYLPQSSDY
Subjt:  NYGVMESQNVGFECFDQSSIGIGSCLGFDSSSDYIYNPTLGSMPTVSDAGAGDFESPAGNFYLPQSSDY

XP_008437672.1 PREDICTED: ethylene-responsive transcription factor LEP [Cucumis melo]

9.0e-76

86.47

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Query:  SAIAYDRAARSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQPPLFLPLLPPTPPSLLHQFPPAGDSPSGIISGDYD-ASAELPPFPPAISSESVDCDY
        +AIAYDRAARSLRGSLARTNFLYSDSPPPPPP YSASI HP+QPPLFLPLLPP PP L HQFPPAGDSPSGII GDYD +SAELPPFPPAISSES +CDY
Subjt:  SAIAYDRAARSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQPPLFLPLLPPTPPSLLHQFPPAGDSPSGIISGDYD-ASAELPPFPPAISSESVDCDY

Query:  NNYGVMESQNVGFECFDQSSIGIGSCLGFDSSSDYIYNPTLGSMPTVSDAGAGDFESPAGNFYLPQSSDY
        NNYG MESQNVGFECFDQSSIG+GSCLGFDSS DY+YNP LGSM TVSDAG GD +SPA NFYLPQSS+Y
Subjt:  NNYGVMESQNVGFECFDQSSIGIGSCLGFDSSSDYIYNPTLGSMPTVSDAGAGDFESPAGNFYLPQSSDY

XP_022990620.1 ethylene-responsive transcription factor LEP-like [Cucurbita maxima]

3.2e-49

66.27

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Query:  SAIAYDRAARSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQPPLFLPLLPPTPPSLLHQFPPAGDSPSGIISGDYDASAELPPFPPAISSESVDCDYN
        +A+AYD AARSLRGSLARTNFLYSDS PPPPP  SA++     PP   PLL PTPP   HQ PP+ DSP  + S D D  AELPPFPPAISSES + +YN
Subjt:  SAIAYDRAARSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQPPLFLPLLPPTPPSLLHQFPPAGDSPSGIISGDYDASAELPPFPPAISSESVDCDYN

Query:  ---NYGVMESQNVGFECFDQSSIGIGSCLGFDSSSDYIYNPTLGSMPTVSDAGAGDFESPAGNFYLPQS
           N G+ME QN GFE FDQSS  IGSC GFDSSS+Y++ P   SMP VSDAGAGDF SPA NFY PQS
Subjt:  ---NYGVMESQNVGFECFDQSSIGIGSCLGFDSSSDYIYNPTLGSMPTVSDAGAGDFESPAGNFYLPQS

TrEMBL top hits

e value

%identity

Alignment

A0A1S3AU89 ethylene-responsive transcription factor LEP

4.4e-76

86.47

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Query:  SAIAYDRAARSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQPPLFLPLLPPTPPSLLHQFPPAGDSPSGIISGDYD-ASAELPPFPPAISSESVDCDY
        +AIAYDRAARSLRGSLARTNFLYSDSPPPPPP YSASI HP+QPPLFLPLLPP PP L HQFPPAGDSPSGII GDYD +SAELPPFPPAISSES +CDY
Subjt:  SAIAYDRAARSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQPPLFLPLLPPTPPSLLHQFPPAGDSPSGIISGDYD-ASAELPPFPPAISSESVDCDY

Query:  NNYGVMESQNVGFECFDQSSIGIGSCLGFDSSSDYIYNPTLGSMPTVSDAGAGDFESPAGNFYLPQSSDY
        NNYG MESQNVGFECFDQSSIG+GSCLGFDSS DY+YNP LGSM TVSDAG GD +SPA NFYLPQSS+Y
Subjt:  NNYGVMESQNVGFECFDQSSIGIGSCLGFDSSSDYIYNPTLGSMPTVSDAGAGDFESPAGNFYLPQSSDY

A0A5A7VFL7 Ethylene-responsive transcription factor LEP

4.4e-76

86.47

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Query:  SAIAYDRAARSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQPPLFLPLLPPTPPSLLHQFPPAGDSPSGIISGDYD-ASAELPPFPPAISSESVDCDY
        +AIAYDRAARSLRGSLARTNFLYSDSPPPPPP YSASI HP+QPPLFLPLLPP PP L HQFPPAGDSPSGII GDYD +SAELPPFPPAISSES +CDY
Subjt:  SAIAYDRAARSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQPPLFLPLLPPTPPSLLHQFPPAGDSPSGIISGDYD-ASAELPPFPPAISSESVDCDY

Query:  NNYGVMESQNVGFECFDQSSIGIGSCLGFDSSSDYIYNPTLGSMPTVSDAGAGDFESPAGNFYLPQSSDY
        NNYG MESQNVGFECFDQSSIG+GSCLGFDSS DY+YNP LGSM TVSDAG GD +SPA NFYLPQSS+Y
Subjt:  NNYGVMESQNVGFECFDQSSIGIGSCLGFDSSSDYIYNPTLGSMPTVSDAGAGDFESPAGNFYLPQSSDY

A0A6J1CKI8 ethylene-responsive transcription factor LEP

1.0e-45

64.29

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Query:  SAIAYDRAARSLRGSLARTNFLYSDSPPPPPPLYSASIHH------PNQPPLFLPLLPPTPPSLLHQFPPAGDSPSGIISGDYDASAELPPFPPAISSES
        +A+AYDRAARSLRGSLARTNFLYSDSPPP PP  SA++ H      P  PPLFLPLLPP  P L  QFP AGDS +   +G  D  AELPPFPPAISSES
Subjt:  SAIAYDRAARSLRGSLARTNFLYSDSPPPPPPLYSASIHH------PNQPPLFLPLLPPTPPSLLHQFPPAGDSPSGIISGDYDASAELPPFPPAISSES

Query:  VDCDYNNYGVMESQNVGFECFDQSSIGIGSCLGFDSSSDYIYNPTLGSMPTVSDAGAGDFESPAGNFY
         + +YNN  +ME+QN+G E  DQSS+GIGS  GFDS  +Y+ +P  G+MP VSDA A DFESPA NFY
Subjt:  VDCDYNNYGVMESQNVGFECFDQSSIGIGSCLGFDSSSDYIYNPTLGSMPTVSDAGAGDFESPAGNFY

A0A6J1HKV8 ethylene-responsive transcription factor LEP-like

1.9e-47

63.01

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Query:  SAIAYDRAARSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQPPLFLPLLPPTPPSLLHQFPPAGDSPSGIISGDYDASAELPPFPPAISSESVDCDYN
        +A+AYD AARSLRGSLARTNFLYSDS PPPPP  SA++     PP   PLL PTPP   HQ PP+ DSP  + S D D  AELPPFPPAISSES + +YN
Subjt:  SAIAYDRAARSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQPPLFLPLLPPTPPSLLHQFPPAGDSPSGIISGDYDASAELPPFPPAISSESVDCDYN

Query:  -------NYGVMESQNVGFECFDQSSIGIGSCLGFDSSSDYIYNPTLGSMPTVSDAGAGDFESPAGNFYLPQS
               N G+ME QN GFE F+QS   IGSC GFDSSS+Y++ P   SMP VSDAGAG+F SPA NFY PQS
Subjt:  -------NYGVMESQNVGFECFDQSSIGIGSCLGFDSSSDYIYNPTLGSMPTVSDAGAGDFESPAGNFYLPQS

A0A6J1JQK9 ethylene-responsive transcription factor LEP-like

1.6e-49

66.27

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Query:  SAIAYDRAARSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQPPLFLPLLPPTPPSLLHQFPPAGDSPSGIISGDYDASAELPPFPPAISSESVDCDYN
        +A+AYD AARSLRGSLARTNFLYSDS PPPPP  SA++     PP   PLL PTPP   HQ PP+ DSP  + S D D  AELPPFPPAISSES + +YN
Subjt:  SAIAYDRAARSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQPPLFLPLLPPTPPSLLHQFPPAGDSPSGIISGDYDASAELPPFPPAISSESVDCDYN

Query:  ---NYGVMESQNVGFECFDQSSIGIGSCLGFDSSSDYIYNPTLGSMPTVSDAGAGDFESPAGNFYLPQS
           N G+ME QN GFE FDQSS  IGSC GFDSSS+Y++ P   SMP VSDAGAGDF SPA NFY PQS
Subjt:  ---NYGVMESQNVGFECFDQSSIGIGSCLGFDSSSDYIYNPTLGSMPTVSDAGAGDFESPAGNFYLPQS

SwissProt top hits

e value

%identity

Alignment

Q9FZ90 Ethylene-responsive transcription factor ERF087

9.5e-04

74.07

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Query:  SAIAYDRAARSLRGSLARTNFLYSDSP
        +A+AYDRAARS+RG  ARTNF+YSD P
Subjt:  SAIAYDRAARSLRGSLARTNFLYSDSP

Q9M644 Ethylene-responsive transcription factor LEP

1.3e-08

33.53

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Query:  SAIAYDRAARSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQPPLFLPLLPPTPPSLLHQFPPAGDSPSGIISGDYDASAELPPFPPAISSESVDCD-Y
        +A+AYDRAARS+RG+ ARTNF+YSD PP        SI  P+ PP      PP PP      PP+ D    ++  +  +S + P   P        CD  
Subjt:  SAIAYDRAARSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQPPLFLPLLPPTPPSLLHQFPPAGDSPSGIISGDYDASAELPPFPPAISSESVDCD-Y

Query:  NNYGVMESQNVGFECFDQSSIG---------IGSC--------LGFDSSSDYIYNPTLGSMPTVSDA
        ++Y    SQ+    C+   S             SC         G D SS+Y+++P    MP VSD+
Subjt:  NNYGVMESQNVGFECFDQSSIG---------IGSC--------LGFDSSSDYIYNPTLGSMPTVSDA

Arabidopsis top hits

e value

%identity

Alignment

AT1G28160.1 Integrase-type DNA-binding superfamily protein

6.8e-05

74.07

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Query:  SAIAYDRAARSLRGSLARTNFLYSDSP
        +A+AYDRAARS+RG  ARTNF+YSD P
Subjt:  SAIAYDRAARSLRGSLARTNFLYSDSP

AT1G50640.1 ethylene responsive element binding factor 3

5.7e-04

53.49

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Query:  SAIAYDRAARSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQ
        +A AYD AAR+LRG  A+TNF    S PPPP L    I + NQ
Subjt:  SAIAYDRAARSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQ

AT5G13910.1 Integrase-type DNA-binding superfamily protein

9.1e-10

33.53

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Query:  SAIAYDRAARSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQPPLFLPLLPPTPPSLLHQFPPAGDSPSGIISGDYDASAELPPFPPAISSESVDCD-Y
        +A+AYDRAARS+RG+ ARTNF+YSD PP        SI  P+ PP      PP PP      PP+ D    ++  +  +S + P   P        CD  
Subjt:  SAIAYDRAARSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQPPLFLPLLPPTPPSLLHQFPPAGDSPSGIISGDYDASAELPPFPPAISSESVDCD-Y

Query:  NNYGVMESQNVGFECFDQSSIG---------IGSC--------LGFDSSSDYIYNPTLGSMPTVSDA
        ++Y    SQ+    C+   S             SC         G D SS+Y+++P    MP VSD+
Subjt:  NNYGVMESQNVGFECFDQSSIG---------IGSC--------LGFDSSSDYIYNPTLGSMPTVSDA

Sequences

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CDS sequence

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ATTTCCGCCATTGCCTACGACCGTGCTGCCCGCTCCCTCCGCGGCTCCCTCGCTCGCACCAACTTCCTCTACTCCGACTCTCCGCCCCCTCCTCCCCCACTCTACTCTGC
CTCCATTCACCACCCCAATCAGCCTCCTCTGTTTCTTCCTCTGCTTCCACCCACTCCTCCCTCTCTTCTCCACCAATTCCCCCCCGCCGGAGACTCCCCTTCCGGAATCA
TCTCCGGCGATTACGACGCCAGCGCTGAGCTTCCGCCATTTCCTCCGGCGATTTCCTCGGAATCGGTGGATTGTGATTATAATAATTACGGTGTGATGGAATCGCAGAAC
GTTGGATTTGAATGCTTTGATCAATCATCAATTGGAATCGGGTCGTGTTTGGGATTTGATTCGAGCAGTGATTATATATATAATCCGACGTTGGGTTCGATGCCGACGGT
TTCCGACGCCGGCGCCGGTGATTTTGAGTCCCCGGCGGGTAATTTCTATTTGCCTCAGTCTTCAGATTACTGA

mRNA sequence

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TTATTTCCGCCATTGCCTACGACCGTGCTGCCCGCTCCCTCCGCGGCTCCCTCGCTCGCACCAACTTCCTCTACTCCGACTCTCCGCCCCCTCCTCCCCCACTCTACTCT
GCCTCCATTCACCACCCCAATCAGCCTCCTCTGTTTCTTCCTCTGCTTCCACCCACTCCTCCCTCTCTTCTCCACCAATTCCCCCCCGCCGGAGACTCCCCTTCCGGAAT
CATCTCCGGCGATTACGACGCCAGCGCTGAGCTTCCGCCATTTCCTCCGGCGATTTCCTCGGAATCGGTGGATTGTGATTATAATAATTACGGTGTGATGGAATCGCAGA
ACGTTGGATTTGAATGCTTTGATCAATCATCAATTGGAATCGGGTCGTGTTTGGGATTTGATTCGAGCAGTGATTATATATATAATCCGACGTTGGGTTCGATGCCGACG
GTTTCCGACGCCGGCGCCGGTGATTTTGAGTCCCCGGCGGGTAATTTCTATTTGCCTCAGTCTTCAGATTACTGA

Protein sequence

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ISAIAYDRAARSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQPPLFLPLLPPTPPSLLHQFPPAGDSPSGIISGDYDASAELPPFPPAISSESVDCDYNNYGVMESQN
VGFECFDQSSIGIGSCLGFDSSSDYIYNPTLGSMPTVSDAGAGDFESPAGNFYLPQSSDY

CSPIUnG00170 (gene) of Cucumber (PI 183967) v1 genome