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CSPIUnG00310 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPIUnG00310
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionNuclear protein X1
Genome locationScaffold000101:146979..147531
RNA-Seq ExpressionCSPIUnG00310
SyntenyCSPIUnG00310
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER33580.1 nuclear protein X1 [Striga asiatica]8.5e-0435.58Show/hide
Query:  ERSAKSGPVGDLVEFCGILVVQDDVETEEIFYNGERMFV-EDGRQSAIGNDKDEDSLTAVYLVSKSRLLEIIVENVVLREVFQHVGNIVGGDDGSSGGEG
        E     G +GDLVE  G  VV +DVE E++F  GE + V E+     + +  D D   AV L  +    E++VE   +  + +  G++VG  DG  GG G
Subjt:  ERSAKSGPVGDLVEFCGILVVQDDVETEEIFYNGERMFV-EDGRQSAIGNDKDEDSLTAVYLVSKSRLLEIIVENVVLREVFQHVGNIVGGDDGSSGGEG

Query:  EEEE
        E+E+
Subjt:  EEEE

KCW72927.1 hypothetical protein EUGRSUZ_E01366 [Eucalyptus grandis]1.5e-0838.39Show/hide
Query:  IERSAKSGPVGDLVEFCGILVVQDDVETEEIFYNGERMFVEDGRQSAIGNDKDEDSLTAVYLVSKSRLLEIIVENVVLREVFQHVGNIVGGDDGSSGGEG
        ++   + G +GDLVE  G+ VV+DDV+ E +  +GE +   +G   A+   +D D L AV LV +  L E+  E  VL E  +  G++V GD G  GG  
Subjt:  IERSAKSGPVGDLVEFCGILVVQDDVETEEIFYNGERMFVEDGRQSAIGNDKDEDSLTAVYLVSKSRLLEIIVENVVLREVFQHVGNIVGGDDGSSGGEG

Query:  EEEEKRFGSRHE
        EEEE+  G   E
Subjt:  EEEEKRFGSRHE

KGN44423.1 hypothetical protein Csa_016298 [Cucumis sativus]2.5e-1181.25Show/hide
Query:  VGDLVEFCGILVVQDDVETEEIFYNGERMFVEDGRQSAIGNDKDEDSL
        VGDLVEFCGI+VVQDD+ETEEIF N ERMFVEDGR+S   NDKD DSL
Subjt:  VGDLVEFCGILVVQDDVETEEIFYNGERMFVEDGRQSAIGNDKDEDSL

TrEMBL top hitse value%identityAlignment
A0A059C3M7 Uncharacterized protein7.2e-0938.39Show/hide
Query:  IERSAKSGPVGDLVEFCGILVVQDDVETEEIFYNGERMFVEDGRQSAIGNDKDEDSLTAVYLVSKSRLLEIIVENVVLREVFQHVGNIVGGDDGSSGGEG
        ++   + G +GDLVE  G+ VV+DDV+ E +  +GE +   +G   A+   +D D L AV LV +  L E+  E  VL E  +  G++V GD G  GG  
Subjt:  IERSAKSGPVGDLVEFCGILVVQDDVETEEIFYNGERMFVEDGRQSAIGNDKDEDSLTAVYLVSKSRLLEIIVENVVLREVFQHVGNIVGGDDGSSGGEG

Query:  EEEEKRFGSRHE
        EEEE+  G   E
Subjt:  EEEEKRFGSRHE

A0A0A0K4L9 Uncharacterized protein1.2e-1181.25Show/hide
Query:  VGDLVEFCGILVVQDDVETEEIFYNGERMFVEDGRQSAIGNDKDEDSL
        VGDLVEFCGI+VVQDD+ETEEIF N ERMFVEDGR+S   NDKD DSL
Subjt:  VGDLVEFCGILVVQDDVETEEIFYNGERMFVEDGRQSAIGNDKDEDSL

A0A0A0KZJ2 Uncharacterized protein4.2e-2559.69Show/hide
Query:  DLWFGIERSAKSGPVGDLVEFCGILVVQDDVETEEIFYNGERMFVEDGRQSAIGNDKDEDSLTAVYLVSKS----------RLLEIIVENVVLREVFQHV
        DLWFGIE S +SG VGDLVEFCGI+VVQDDV+TEEIFYNGERMFV+DGR+S IGN+KD DSLTAVYLV KS          R LE  +EN   RE  +  
Subjt:  DLWFGIERSAKSGPVGDLVEFCGILVVQDDVETEEIFYNGERMFVEDGRQSAIGNDKDEDSLTAVYLVSKS----------RLLEIIVENVVLREVFQHV

Query:  GNIVGGDDGSSG-GEGEEEEKRFGSRHEK
             G  G SG G   EEE R+ S   K
Subjt:  GNIVGGDDGSSG-GEGEEEEKRFGSRHEK

A0A5A7PLF7 Nuclear protein X14.1e-0435.58Show/hide
Query:  ERSAKSGPVGDLVEFCGILVVQDDVETEEIFYNGERMFV-EDGRQSAIGNDKDEDSLTAVYLVSKSRLLEIIVENVVLREVFQHVGNIVGGDDGSSGGEG
        E     G +GDLVE  G  VV +DVE E++F  GE + V E+     + +  D D   AV L  +    E++VE   +  + +  G++VG  DG  GG G
Subjt:  ERSAKSGPVGDLVEFCGILVVQDDVETEEIFYNGERMFV-EDGRQSAIGNDKDEDSLTAVYLVSKSRLLEIIVENVVLREVFQHVGNIVGGDDGSSGGEG

Query:  EEEE
        E+E+
Subjt:  EEEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAACATTGAAAGCCGAGGGAGCTGAAGCTGTCAAAATCCCCTACATCTCAATAACCGAAATGTTGTATGGCAAACTCACAACCCACTTCATAAATATAGATTTCCA
AGAGCGTGACCTGTGGTTTGGTATAGAGCGTAGTGCAAAGAGTGGTCCCGTTGGAGATCTTGTGGAGTTTTGCGGGATCTTAGTAGTCCAAGACGATGTGGAGACTGAAG
AGATTTTTTATAATGGAGAGAGGATGTTTGTCGAGGATGGGAGACAGAGTGCCATTGGCAACGACAAGGACGAGGATAGTCTGACGGCTGTTTATCTCGTCAGTAAGTCT
CGTTTGTTGGAGATAATTGTTGAAAACGTTGTACTAAGGGAAGTCTTTCAGCATGTCGGTAATATTGTGGGCGGAGACGATGGCAGCAGTGGCGGCGAAGGCGAGGAAGA
GGAGAAGAGATTTGGAAGCCGCCATGAGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTAACATTGAAAGCCGAGGGAGCTGAAGCTGTCAAAATCCCCTACATCTCAATAACCGAAATGTTGTATGGCAAACTCACAACCCACTTCATAAATATAGATTTCCA
AGAGCGTGACCTGTGGTTTGGTATAGAGCGTAGTGCAAAGAGTGGTCCCGTTGGAGATCTTGTGGAGTTTTGCGGGATCTTAGTAGTCCAAGACGATGTGGAGACTGAAG
AGATTTTTTATAATGGAGAGAGGATGTTTGTCGAGGATGGGAGACAGAGTGCCATTGGCAACGACAAGGACGAGGATAGTCTGACGGCTGTTTATCTCGTCAGTAAGTCT
CGTTTGTTGGAGATAATTGTTGAAAACGTTGTACTAAGGGAAGTCTTTCAGCATGTCGGTAATATTGTGGGCGGAGACGATGGCAGCAGTGGCGGCGAAGGCGAGGAAGA
GGAGAAGAGATTTGGAAGCCGCCATGAGAAATAG
Protein sequenceShow/hide protein sequence
MLTLKAEGAEAVKIPYISITEMLYGKLTTHFINIDFQERDLWFGIERSAKSGPVGDLVEFCGILVVQDDVETEEIFYNGERMFVEDGRQSAIGNDKDEDSLTAVYLVSKS
RLLEIIVENVVLREVFQHVGNIVGGDDGSSGGEGEEEEKRFGSRHEK