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CSPIUnG00330 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPIUnG00330
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRibosomal protein
Genome locationScaffold000101:163489..165396
RNA-Seq ExpressionCSPIUnG00330
SyntenyCSPIUnG00330
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000473 - Ribosomal protein L36
IPR035977 - Ribosomal protein L36 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150587.2 uncharacterized protein LOC101223220 [Cucumis sativus]4.3e-4398.94Show/hide
Query:  MEEQSSIIHTLFSPSSQLLTVTLDPRVFAKKSFIFSLNLCINAMKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSL
        MEE+SSIIHTLFSPSSQLLTVTLDPRVFAKKSFIFSLNLCINAMKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSL
Subjt:  MEEQSSIIHTLFSPSSQLLTVTLDPRVFAKKSFIFSLNLCINAMKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSL

XP_008443993.2 PREDICTED: uncharacterized protein LOC103487446 [Cucumis melo]9.7e-1998.04Show/hide
Query:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSL
        MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFA EGPSPSL
Subjt:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSL

XP_022144930.1 uncharacterized protein LOC111014487 [Momordica charantia]2.8e-1894.12Show/hide
Query:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSL
        MKVRSSVKKMCEFCRTVKR+GRVY+YCSSNPKHKQRQGLSTFASEGPSP L
Subjt:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSL

XP_022971996.1 uncharacterized protein LOC111470644 [Cucurbita maxima]1.4e-1792.16Show/hide
Query:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSL
        MKVR+SVKKMCEFCRTV+R+GRVYIYCSSNPKHKQRQGLSTFASE PSPSL
Subjt:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSL

XP_038879717.1 uncharacterized protein LOC120071478 [Benincasa hispida]6.3e-1892.16Show/hide
Query:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSL
        MKVR+SVKKMCEFCRTVKR+GRVY+YCSSNPKHKQRQGLSTFASEGP PSL
Subjt:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSL

TrEMBL top hitse value%identityAlignment
A0A1S3B8W2 Ribosomal protein4.7e-1998.04Show/hide
Query:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSL
        MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFA EGPSPSL
Subjt:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSL

A0A5A7U4L3 Ribosomal protein4.7e-1998.04Show/hide
Query:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSL
        MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFA EGPSPSL
Subjt:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSL

A0A6J1CT08 Ribosomal protein1.4e-1894.12Show/hide
Query:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSL
        MKVRSSVKKMCEFCRTVKR+GRVY+YCSSNPKHKQRQGLSTFASEGPSP L
Subjt:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSL

A0A6J1I4R0 Ribosomal protein6.8e-1892.16Show/hide
Query:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSL
        MKVR+SVKKMCEFCRTV+R+GRVYIYCSSNPKHKQRQGLSTFASE PSPSL
Subjt:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSL

A0A6J1JBN8 Ribosomal protein1.2e-1783.05Show/hide
Query:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSLERFFFPSN
        MKVR+SVKKMCEFCRTVKR+GRVY+YCSSNPKHKQRQGLST ASEGPSP L    FPS+
Subjt:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSLERFFFPSN

SwissProt top hitse value%identityAlignment
A5VLI2 50S ribosomal protein L361.5e-0976.32Show/hide
Query:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQG
        MKVR SVKKMCE C+ VKR GRV + CS+NPKHKQRQG
Subjt:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQG

B2G8V5 50S ribosomal protein L361.5e-0976.32Show/hide
Query:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQG
        MKVR SVKKMCE C+ VKR GRV + CS+NPKHKQRQG
Subjt:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQG

B3WAJ5 50S ribosomal protein L365.0e-1078.95Show/hide
Query:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQG
        MKVR SVKKMCE C+ V+RKGRV I CS+NPKHKQRQG
Subjt:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQG

Q035A6 50S ribosomal protein L365.0e-1078.95Show/hide
Query:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQG
        MKVR SVKKMCE C+ V+RKGRV I CS+NPKHKQRQG
Subjt:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQG

Q03PY0 50S ribosomal protein L361.9e-0973.68Show/hide
Query:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQG
        MKVR SVK MCE C+ +KRKGRV + CS+NPKHKQRQG
Subjt:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQG

Arabidopsis top hitse value%identityAlignment
AT5G20180.1 Ribosomal protein L365.1e-1882Show/hide
Query:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPS
        MKVRSSVKKMCEFC+TVKR+GRVY+ CSSNPKHKQRQG S+FA EG +PS
Subjt:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPS

AT5G20180.2 Ribosomal protein L365.1e-1882Show/hide
Query:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPS
        MKVRSSVKKMCEFC+TVKR+GRVY+ CSSNPKHKQRQG S+FA EG +PS
Subjt:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPS

ATCG00760.1 ribosomal protein L366.3e-0860.53Show/hide
Query:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQG
        MK+R+SV+K+CE CR ++R+GR+ + C SNP+HKQRQG
Subjt:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAGCAAAGTTCCATAATCCATACTTTGTTTAGTCCTTCGTCTCAGCTGCTGACCGTCACTCTCGATCCGAGGGTATTTGCCAAGAAATCATTCATTTTTTCACT
TAACCTTTGCATCAACGCCATGAAAGTCCGTTCTTCGGTGAAAAAGATGTGCGAATTTTGTAGGACAGTGAAGCGTAAAGGCCGGGTATATATATACTGCTCATCTAATC
CCAAACACAAGCAACGCCAGGGCCTGTCTACATTTGCAAGTGAAGGTCCTTCTCCTTCCTTGGAGAGGTTTTTTTTTCCTTCAAATTGTGGTGCACTCTCAGTTGCATTG
GGCCTAACATTATCACTTTCCGGTGAGGGCTTCAATGGCCGCTTTACTGCCCTAGATTTTGCAGTCAAAGCGAGGGGCTTGATTCCTGGAAACTGGTTCTTCAAATTTGG
CACTTACAAGTTTTCTTCCAGTTCCATCCTCTACAATGCAGCTGAAGTTCTCAAGAACCGAGGTGAAGCAAGAGATTCTTCCCAGTCAAAGTTTGCGAACAGGGCTGGCT
TCTCTCATCCCCCAAAAGAACGAGCCAACAATGTTTCTTGGTTGGAGAATGGGTCTGGCTTCAATCCTGTTGAAGAAACACAATTAGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAGCAAAGTTCCATAATCCATACTTTGTTTAGTCCTTCGTCTCAGCTGCTGACCGTCACTCTCGATCCGAGGGTATTTGCCAAGAAATCATTCATTTTTTCACT
TAACCTTTGCATCAACGCCATGAAAGTCCGTTCTTCGGTGAAAAAGATGTGCGAATTTTGTAGGACAGTGAAGCGTAAAGGCCGGGTATATATATACTGCTCATCTAATC
CCAAACACAAGCAACGCCAGGGCCTGTCTACATTTGCAAGTGAAGGTCCTTCTCCTTCCTTGGAGAGGTTTTTTTTTCCTTCAAATTGTGGTGCACTCTCAGTTGCATTG
GGCCTAACATTATCACTTTCCGGTGAGGGCTTCAATGGCCGCTTTACTGCCCTAGATTTTGCAGTCAAAGCGAGGGGCTTGATTCCTGGAAACTGGTTCTTCAAATTTGG
CACTTACAAGTTTTCTTCCAGTTCCATCCTCTACAATGCAGCTGAAGTTCTCAAGAACCGAGGTGAAGCAAGAGATTCTTCCCAGTCAAAGTTTGCGAACAGGGCTGGCT
TCTCTCATCCCCCAAAAGAACGAGCCAACAATGTTTCTTGGTTGGAGAATGGGTCTGGCTTCAATCCTGTTGAAGAAACACAATTAGCTTAG
Protein sequenceShow/hide protein sequence
MEEQSSIIHTLFSPSSQLLTVTLDPRVFAKKSFIFSLNLCINAMKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSLERFFFPSNCGALSVAL
GLTLSLSGEGFNGRFTALDFAVKARGLIPGNWFFKFGTYKFSSSSILYNAAEVLKNRGEARDSSQSKFANRAGFSHPPKERANNVSWLENGSGFNPVEETQLA