; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPIUnG00700 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPIUnG00700
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionGlycine-rich RNA-binding family protein
Genome locationScaffold000128:61441..65338
RNA-Seq ExpressionCSPIUnG00700
SyntenyCSPIUnG00700
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR001878 - Zinc finger, CCHC-type
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602289.1 Glycine-rich RNA-binding protein RZ1C, partial [Cucurbita argyrosperma subsp. sororia]7.8e-14188.58Show/hide
Query:  MASKDEYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKMEGDDTEQGFRGGG
        MA+KDEYRIFVGGLSWN+SER+LENAF R+GK++ETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHG E GERIISVNKAEPKMEGDD E GFRGGG
Subjt:  MASKDEYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKMEGDDTEQGFRGGG

Query:  YSSGGRASFGRGKDRSVGQDECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDERY----NGGRYGDRDRFDRRDDKYGS
        YSSGGRASFGRG DRSVGQDECFKCGRPGHWARDCPS GGGRG GRGSFSSRSRFD D RGDRFGGDRDRYVD+RY    +GGRYGDRDRFDRRDDKYGS
Subjt:  YSSGGRASFGRGKDRSVGQDECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDERY----NGGRYGDRDRFDRRDDKYGS

Query:  RDRYFDDRYPSAGDRFTGSDRYDVSDRYPQNGYVKDR-VYDRDIGPRSGSDRYGS-GGPGRHEGRSYRDRTGPYDRPSRVGRPSSYDHY
        RDRYFDDRYPSAGDRF G DRYDVSDRYPQNGYVKDR  YDRDIGPRSGSDRYG+ GGPGR+EGRSYRDR GPYDRPSR GRPSSY+ Y
Subjt:  RDRYFDDRYPSAGDRFTGSDRYDVSDRYPQNGYVKDR-VYDRDIGPRSGSDRYGS-GGPGRHEGRSYRDRTGPYDRPSRVGRPSSYDHY

XP_004150370.1 glycine-rich RNA-binding protein RZ1C isoform X1 [Cucumis sativus]1.7e-15999.65Show/hide
Query:  MASKDEYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKMEGDDTEQGFRGGG
        MASKDEYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKMEGDDTEQGFRGGG
Subjt:  MASKDEYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKMEGDDTEQGFRGGG

Query:  YSSGGRASFGRGKDRSVGQDECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDERYNGGRYGDRDRFDRRDDKYGSRDRY
        YSSGGRASFGRGKDRSVGQDECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDERYNGGRYGDRDRFDRRDDKYGSRDRY
Subjt:  YSSGGRASFGRGKDRSVGQDECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDERYNGGRYGDRDRFDRRDDKYGSRDRY

Query:  FDDRYPSAGDRFTGSDRYDVSDRYPQNGYVKDRVYDRDIGPRSGSDRYGSGGPGRHEGRSYRDRTGPYDRPSRVGRPSSYDHY
        FDDRYPSAGDRFTGSDRYDVSDRYPQNGYVKDRVYDRDIGPRSGSDRYGSGGPGRHEGRSYRDRTGPYDRPSRVGRPSSYD Y
Subjt:  FDDRYPSAGDRFTGSDRYDVSDRYPQNGYVKDRVYDRDIGPRSGSDRYGSGGPGRHEGRSYRDRTGPYDRPSRVGRPSSYDHY

XP_022133790.1 glycine-rich RNA-binding protein RZ1C-like isoform X1 [Momordica charantia]1.3e-14390.85Show/hide
Query:  MASKDEYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKMEGDDTEQGFRGGG
        MA KDEYRIFVGGLSWNISERQLENAF R+GK+LETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHG+ELGER ISVNKAEPKMEGDD E GFRGGG
Subjt:  MASKDEYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKMEGDDTEQGFRGGG

Query:  YSSGGRASFGRGKDRSVGQDECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDERYNGGRYGDRDRFDRRDDKYGSRDRY
        YSSGGR SFGRG DRSVGQDECFKCGRPGHWARDCPSVGGGRG GRGSFSSRSRFDSD RGDRFGGDRDRYVD+RY+GGRYGDRD FDRRDDKYGSRDRY
Subjt:  YSSGGRASFGRGKDRSVGQDECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDERYNGGRYGDRDRFDRRDDKYGSRDRY

Query:  FDDRYPSAGDRFTGSDRYDVSDRYPQNGYVKDR-VYDRDIGPRSGSDRYGSGGPGRHEGRSYRDRTGPYDRPSRVGRPSSYDHY
        FDDRYPS GDRF G DRYDVSDRYPQNGYVKDR  Y+RDIGPRSGSDRYGSGGPGR+EGRSYRDR GPYDRPSR GRPSSY+ Y
Subjt:  FDDRYPSAGDRFTGSDRYDVSDRYPQNGYVKDR-VYDRDIGPRSGSDRYGSGGPGRHEGRSYRDRTGPYDRPSRVGRPSSYDHY

XP_022961758.1 glycine-rich RNA-binding protein RZ1C-like [Cucurbita moschata]2.0e-14188.93Show/hide
Query:  MASKDEYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKMEGDDTEQGFRGGG
        MA+KDEYRIFVGGLSWN+SER+LENAF R+GK++ETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHG E GERIISVNKAEPKMEGDD E GFRGGG
Subjt:  MASKDEYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKMEGDDTEQGFRGGG

Query:  YSSGGRASFGRGKDRSVGQDECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDERY----NGGRYGDRDRFDRRDDKYGS
        YSSGGRASFGRG DRSVGQDECFKCGRPGHWARDCPS GGGRG GRGSFSSRSRFD D RGDRFGGDRDRYVD+RY    +GGRYGDRDRFDRRDDKYGS
Subjt:  YSSGGRASFGRGKDRSVGQDECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDERY----NGGRYGDRDRFDRRDDKYGS

Query:  RDRYFDDRYPSAGDRFTGSDRYDVSDRYPQNGYVKDR-VYDRDIGPRSGSDRYGS-GGPGRHEGRSYRDRTGPYDRPSRVGRPSSYDHY
        RDRYFDDRYPSAGDRFTG DRYDVSDRYPQNGYVKDR  YDRDIGPRSGSDRYG+ GGPGR+EGRSYRDR GPYDRPSR GRPSSY+ Y
Subjt:  RDRYFDDRYPSAGDRFTGSDRYDVSDRYPQNGYVKDR-VYDRDIGPRSGSDRYGS-GGPGRHEGRSYRDRTGPYDRPSRVGRPSSYDHY

XP_038885252.1 glycine-rich RNA-binding protein RZ1C isoform X1 [Benincasa hispida]7.8e-14994.35Show/hide
Query:  MASKDEYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKMEGDDTEQGFRGGG
        MA+KDEYRIFVGGLSWNISERQLENAF RFGK+LETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQE GERIISVNKAEPKMEGDD E GFRGGG
Subjt:  MASKDEYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKMEGDDTEQGFRGGG

Query:  YSSGGRASFGRGKDRSVGQDECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDERYNGGRYGDRDRFDRRDDKYGSRDRY
        YSSGGRASFGRG DRSVGQDECFKCGRPGHWARDCPSV GGRG GR SFSSRSRFDSDGRGDRFGGDRDRYVD+RYNGGRYGDRDRFDRRDDKYGSRDRY
Subjt:  YSSGGRASFGRGKDRSVGQDECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDERYNGGRYGDRDRFDRRDDKYGSRDRY

Query:  FDDRYPSAGDRFTGSDRYDVSDRYPQNGYVKDRVYDRDIGPRSGSDRYGSGGPGRHEGRSYRDRTGPYDRPSRVGRPSSYDHY
        FDDRYPSAGDRF G DRYDVSDRYPQNGYVKDR YDRDIGPRSGSDRYGSGGPGRHEGRSYRDRTGPYDRPSR GRPSSYD Y
Subjt:  FDDRYPSAGDRFTGSDRYDVSDRYPQNGYVKDRVYDRDIGPRSGSDRYGSGGPGRHEGRSYRDRTGPYDRPSRVGRPSSYDHY

TrEMBL top hitse value%identityAlignment
A0A0A0LQB5 Uncharacterized protein8.1e-16099.65Show/hide
Query:  MASKDEYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKMEGDDTEQGFRGGG
        MASKDEYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKMEGDDTEQGFRGGG
Subjt:  MASKDEYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKMEGDDTEQGFRGGG

Query:  YSSGGRASFGRGKDRSVGQDECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDERYNGGRYGDRDRFDRRDDKYGSRDRY
        YSSGGRASFGRGKDRSVGQDECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDERYNGGRYGDRDRFDRRDDKYGSRDRY
Subjt:  YSSGGRASFGRGKDRSVGQDECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDERYNGGRYGDRDRFDRRDDKYGSRDRY

Query:  FDDRYPSAGDRFTGSDRYDVSDRYPQNGYVKDRVYDRDIGPRSGSDRYGSGGPGRHEGRSYRDRTGPYDRPSRVGRPSSYDHY
        FDDRYPSAGDRFTGSDRYDVSDRYPQNGYVKDRVYDRDIGPRSGSDRYGSGGPGRHEGRSYRDRTGPYDRPSRVGRPSSYD Y
Subjt:  FDDRYPSAGDRFTGSDRYDVSDRYPQNGYVKDRVYDRDIGPRSGSDRYGSGGPGRHEGRSYRDRTGPYDRPSRVGRPSSYDHY

A0A6J1BW59 glycine-rich RNA-binding protein RZ1C-like isoform X24.6e-12391.06Show/hide
Query:  MLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKMEGDDTEQGFRGGGYSSGGRASFGRGKDRSVGQDECFKCGRPGHWARDCPSV
        MLERDTGRPRGFGFITFADRRGMDDAIREMHG+ELGER ISVNKAEPKMEGDD E GFRGGGYSSGGR SFGRG DRSVGQDECFKCGRPGHWARDCPSV
Subjt:  MLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKMEGDDTEQGFRGGGYSSGGRASFGRGKDRSVGQDECFKCGRPGHWARDCPSV

Query:  GGGRGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDERYNGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFTGSDRYDVSDRYPQNGYVKDR-VYDR
        GGGRG GRGSFSSRSRFDSD RGDRFGGDRDRYVD+RY+GGRYGDRD FDRRDDKYGSRDRYFDDRYPS GDRF G DRYDVSDRYPQNGYVKDR  Y+R
Subjt:  GGGRGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDERYNGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFTGSDRYDVSDRYPQNGYVKDR-VYDR

Query:  DIGPRSGSDRYGSGGPGRHEGRSYRDRTGPYDRPSRVGRPSSYDHY
        DIGPRSGSDRYGSGGPGR+EGRSYRDR GPYDRPSR GRPSSY+ Y
Subjt:  DIGPRSGSDRYGSGGPGRHEGRSYRDRTGPYDRPSRVGRPSSYDHY

A0A6J1BW89 glycine-rich RNA-binding protein RZ1C-like isoform X16.2e-14490.85Show/hide
Query:  MASKDEYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKMEGDDTEQGFRGGG
        MA KDEYRIFVGGLSWNISERQLENAF R+GK+LETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHG+ELGER ISVNKAEPKMEGDD E GFRGGG
Subjt:  MASKDEYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKMEGDDTEQGFRGGG

Query:  YSSGGRASFGRGKDRSVGQDECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDERYNGGRYGDRDRFDRRDDKYGSRDRY
        YSSGGR SFGRG DRSVGQDECFKCGRPGHWARDCPSVGGGRG GRGSFSSRSRFDSD RGDRFGGDRDRYVD+RY+GGRYGDRD FDRRDDKYGSRDRY
Subjt:  YSSGGRASFGRGKDRSVGQDECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDERYNGGRYGDRDRFDRRDDKYGSRDRY

Query:  FDDRYPSAGDRFTGSDRYDVSDRYPQNGYVKDR-VYDRDIGPRSGSDRYGSGGPGRHEGRSYRDRTGPYDRPSRVGRPSSYDHY
        FDDRYPS GDRF G DRYDVSDRYPQNGYVKDR  Y+RDIGPRSGSDRYGSGGPGR+EGRSYRDR GPYDRPSR GRPSSY+ Y
Subjt:  FDDRYPSAGDRFTGSDRYDVSDRYPQNGYVKDR-VYDRDIGPRSGSDRYGSGGPGRHEGRSYRDRTGPYDRPSRVGRPSSYDHY

A0A6J1HB93 glycine-rich RNA-binding protein RZ1C-like9.9e-14288.93Show/hide
Query:  MASKDEYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKMEGDDTEQGFRGGG
        MA+KDEYRIFVGGLSWN+SER+LENAF R+GK++ETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHG E GERIISVNKAEPKMEGDD E GFRGGG
Subjt:  MASKDEYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKMEGDDTEQGFRGGG

Query:  YSSGGRASFGRGKDRSVGQDECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDERY----NGGRYGDRDRFDRRDDKYGS
        YSSGGRASFGRG DRSVGQDECFKCGRPGHWARDCPS GGGRG GRGSFSSRSRFD D RGDRFGGDRDRYVD+RY    +GGRYGDRDRFDRRDDKYGS
Subjt:  YSSGGRASFGRGKDRSVGQDECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDERY----NGGRYGDRDRFDRRDDKYGS

Query:  RDRYFDDRYPSAGDRFTGSDRYDVSDRYPQNGYVKDR-VYDRDIGPRSGSDRYGS-GGPGRHEGRSYRDRTGPYDRPSRVGRPSSYDHY
        RDRYFDDRYPSAGDRFTG DRYDVSDRYPQNGYVKDR  YDRDIGPRSGSDRYG+ GGPGR+EGRSYRDR GPYDRPSR GRPSSY+ Y
Subjt:  RDRYFDDRYPSAGDRFTGSDRYDVSDRYPQNGYVKDR-VYDRDIGPRSGSDRYGS-GGPGRHEGRSYRDRTGPYDRPSRVGRPSSYDHY

A0A6J1JS04 glycine-rich RNA-binding protein RZ1C8.4e-14188.24Show/hide
Query:  MASKDEYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKMEGDDTEQGFRGGG
        MA+KDEYRIFVGGLSWN+SER+LENAF R+GK++ETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHG E GERIISVNKAEPKMEGDD E GFRGGG
Subjt:  MASKDEYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKMEGDDTEQGFRGGG

Query:  YSSGGRASFGRGKDRSVGQDECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDERY----NGGRYGDRDRFDRRDDKYGS
        YSSGGRASFGRG DRSVGQDECFKCGRPGHWARDCPS GGGRG GRGSFSSRSRFD D RGDRFGGDRDRYVD+RY    +GGRYGDRDRFDRRDDKYGS
Subjt:  YSSGGRASFGRGKDRSVGQDECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDERY----NGGRYGDRDRFDRRDDKYGS

Query:  RDRYFDDRYPSAGDRFTGSDRYDVSDRYPQNGYVKDR-VYDRDIGPRSGSDRYGS-GGPGRHEGRSYRDRTGPYDRPSRVGRPSSYDHY
        RDRYFDDRYPSAGDRF G DRYDVSDRYPQNGYVKDR  YDRDIGPRSGSDRYG+ GGPGR+EGR+YRDR GPYDRPSR GRPSSY+ Y
Subjt:  RDRYFDDRYPSAGDRFTGSDRYDVSDRYPQNGYVKDR-VYDRDIGPRSGSDRYGS-GGPGRHEGRSYRDRTGPYDRPSRVGRPSSYDHY

SwissProt top hitse value%identityAlignment
O22703 Glycine-rich RNA-binding protein RZ1B7.2e-7356.12Show/hide
Query:  EYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKMEGDDTEQGFRGGGYSSGG
        E RIFVGGLSW+++ERQLE+ F R+GK+ E QIM+ RDTGRPRGFGFITF DRRG DDAI+ MHG+ELG ++ISVNKAEPK+ G+D +Q  +GGGYSS G
Subjt:  EYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKMEGDDTEQGFRGGGYSSGG

Query:  RASFGRGKDRSVGQDECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRF-DSDGRGDRFGG-----------DRDRYVDER--YNGGRYGDRDRFDRRD
        + +          +DECFKC RPGHWARDCPS G  R   R   + RSR  D DG  DR+G            + DRY+D R   +GGRY  RDRFD   
Subjt:  RASFGRGKDRSVGQDECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRF-DSDGRGDRFGG-----------DRDRYVDER--YNGGRYGDRDRFDRRD

Query:  DKYGSRDRYFDDRYPSAGDRFTGSDRYDVSDRYPQNGY-VKDRVYDRDIGPRSGSDRYGSGGPGRHEGRSYRDRTGPYDRPSRV-GRPSSYDHY
        DKY  RD Y  +RY   GDRF  SDRY + + + +N Y  ++R YDRD   R  SDRYG  GP R EGR YR R GPYDRPSR  GRPSSY+ +
Subjt:  DKYGSRDRYFDDRYPSAGDRFTGSDRYDVSDRYPQNGY-VKDRVYDRDIGPRSGSDRYGSGGPGRHEGRSYRDRTGPYDRPSRV-GRPSSYDHY

P49310 Glycine-rich RNA-binding protein GRP1A2.4e-2343.86Show/hide
Query:  MASKD-EYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKMEGDDTEQGFRGG
        MAS D EYR FVGGL+W   +R LE AF ++G++L+++I+ +R+TGR RGFGF+TF D + M DAI  M+GQ+L  R I+VN+A+ +  G        GG
Subjt:  MASKD-EYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKMEGDDTEQGFRGG

Query:  GYSSGGRASFGRGKDRSVGQDECFKCGRPGHWARDCPSVGGG----RGGGRGSFSSRSRFDSDGRGDRFGG
        GY SGG   +G G     G       GR G +     S GGG    RGGG G +    R D  G G  +GG
Subjt:  GYSSGGRASFGRGKDRSVGQDECFKCGRPGHWARDCPSVGGG----RGGGRGSFSSRSRFDSDGRGDRFGG

P49311 Glycine-rich RNA-binding protein GRP2A1.2e-2241.28Show/hide
Query:  MASKD-EYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKME-----GDDTEQ
        MAS D EYR FVGGL+W   ER LE AF +FG++++++I+ +R+TGR RGFGF+TF D + M DAI  M+GQ+L  R I+VN+A+ +       G     
Subjt:  MASKD-EYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKME-----GDDTEQ

Query:  GFRGGGYSSGGRASFGRGKDRSVGQDECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRFDSDGRGDRFGG
        G+RGGG   GG   +G G+    G    +  G  G+           RGGG G +    R D  G G   GG
Subjt:  GFRGGGYSSGGRASFGRGKDRSVGQDECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRFDSDGRGDRFGG

Q8RWN5 Glycine-rich RNA-binding protein RZ1C3.6e-8059.27Show/hide
Query:  MASKDEYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKMEGDDTE-QGFRGG
        MA+K+  RIFVGGLS  +++R LE AF RFG +L+ QIMLERDTGR RGFGFITFADRR MD++IREMHG++ G+R+ISVN+AEPK+  DD E  G RGG
Subjt:  MASKDEYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKMEGDDTE-QGFRGG

Query:  ---GYSSGGRASFGRGKDRS--VGQDECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRF--DSDGRGDRFGG-----DRDRYVDERYNG-GRYGDRDR
           GYS  G+ SFG G      VG+DECFKCGR GHWARDCPS GGGRGG  G FSSR+     SDGR DR+       DR+RY+D+RY+G  RYG RDR
Subjt:  ---GYSSGGRASFGRGKDRS--VGQDECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRF--DSDGRGDRFGG-----DRDRYVDERYNG-GRYGDRDR

Query:  FDRRDDKYGSRDRYFDDRYPSAGDRFTGSDRYD-VSDRYPQNGYVKDRVYDRDIGPRSGSDRYG---SGGP---GRHEGRSYRDRTG-PYDRPSRVGRPS
        FD R + Y  RDRY  DRY +  DRF G DRY   SDRYP   Y K R ++RDI P +GSDRYG   +GGP   G  EGR +R R G PY+RPSR G   
Subjt:  FDRRDDKYGSRDRYFDDRYPSAGDRFTGSDRYD-VSDRYPQNGYVKDRVYDRDIGPRSGSDRYG---SGGP---GRHEGRSYRDRTG-PYDRPSRVGRPS

Query:  SY
        +Y
Subjt:  SY

Q9LIN3 Glycine-rich RNA-binding protein RZ1A1.1e-3340.86Show/hide
Query:  MASKDEYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKMEG----DDTEQGF
        M+   EYR F+GGL+W  S+R L +AF ++G ++E +++L++ +GR RGFGFITF +++ MD+AI  M+G +L  R I+V+KA+P   G    +D ++G 
Subjt:  MASKDEYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKMEG----DDTEQGF

Query:  RGGGYSSGGRASFGRGKDRSVGQDECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRFDSDGRGDRFGGDRDRY--VDERYNG--GRYGDR-DRFDRRD
          G      R S GR      G  +CFKCG+PGH+AR+CPS     GGGR S S   R+ S  + DR+G   DRY   ++RY     RY  + DR+  +D
Subjt:  RGGGYSSGGRASFGRGKDRSVGQDECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRFDSDGRGDRFGGDRDRY--VDERYNG--GRYGDR-DRFDRRD

Query:  DKYGSRD----RYFDDRYPSAGDRFTGSDRYDVSDRYPQNGYVKDRVYDRDIGPRSG
        D+YGSRD    RY  DR   +G+R  G  R   S   P         YDR   PR+G
Subjt:  DKYGSRD----RYFDDRYPSAGDRFTGSDRYDVSDRYPQNGYVKDRVYDRDIGPRSG

Arabidopsis top hitse value%identityAlignment
AT1G60650.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain5.1e-7456.12Show/hide
Query:  EYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKMEGDDTEQGFRGGGYSSGG
        E RIFVGGLSW+++ERQLE+ F R+GK+ E QIM+ RDTGRPRGFGFITF DRRG DDAI+ MHG+ELG ++ISVNKAEPK+ G+D +Q  +GGGYSS G
Subjt:  EYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKMEGDDTEQGFRGGGYSSGG

Query:  RASFGRGKDRSVGQDECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRF-DSDGRGDRFGG-----------DRDRYVDER--YNGGRYGDRDRFDRRD
        + +          +DECFKC RPGHWARDCPS G  R   R   + RSR  D DG  DR+G            + DRY+D R   +GGRY  RDRFD   
Subjt:  RASFGRGKDRSVGQDECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRF-DSDGRGDRFGG-----------DRDRYVDER--YNGGRYGDRDRFDRRD

Query:  DKYGSRDRYFDDRYPSAGDRFTGSDRYDVSDRYPQNGY-VKDRVYDRDIGPRSGSDRYGSGGPGRHEGRSYRDRTGPYDRPSRV-GRPSSYDHY
        DKY  RD Y  +RY   GDRF  SDRY + + + +N Y  ++R YDRD   R  SDRYG  GP R EGR YR R GPYDRPSR  GRPSSY+ +
Subjt:  DKYGSRDRYFDDRYPSAGDRFTGSDRYDVSDRYPQNGY-VKDRVYDRDIGPRSGSDRYGSGGPGRHEGRSYRDRTGPYDRPSRV-GRPSSYDHY

AT1G60650.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain5.1e-7456.12Show/hide
Query:  EYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKMEGDDTEQGFRGGGYSSGG
        E RIFVGGLSW+++ERQLE+ F R+GK+ E QIM+ RDTGRPRGFGFITF DRRG DDAI+ MHG+ELG ++ISVNKAEPK+ G+D +Q  +GGGYSS G
Subjt:  EYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKMEGDDTEQGFRGGGYSSGG

Query:  RASFGRGKDRSVGQDECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRF-DSDGRGDRFGG-----------DRDRYVDER--YNGGRYGDRDRFDRRD
        + +          +DECFKC RPGHWARDCPS G  R   R   + RSR  D DG  DR+G            + DRY+D R   +GGRY  RDRFD   
Subjt:  RASFGRGKDRSVGQDECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRF-DSDGRGDRFGG-----------DRDRYVDER--YNGGRYGDRDRFDRRD

Query:  DKYGSRDRYFDDRYPSAGDRFTGSDRYDVSDRYPQNGY-VKDRVYDRDIGPRSGSDRYGSGGPGRHEGRSYRDRTGPYDRPSRV-GRPSSYDHY
        DKY  RD Y  +RY   GDRF  SDRY + + + +N Y  ++R YDRD   R  SDRYG  GP R EGR YR R GPYDRPSR  GRPSSY+ +
Subjt:  DKYGSRDRYFDDRYPSAGDRFTGSDRYDVSDRYPQNGY-VKDRVYDRDIGPRSGSDRYGSGGPGRHEGRSYRDRTGPYDRPSRV-GRPSSYDHY

AT2G21660.1 cold, circadian rhythm, and rna binding 21.4e-2341.85Show/hide
Query:  MASKD-EYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPK-MEGDDTEQGFRG
        MAS D EYR FVGGL+W   +R LE AF ++G +++++I+ +R+TGR RGFGF+TF D + M DAI  M+GQ+L  R I+VN+A+ +   G    +G  G
Subjt:  MASKD-EYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPK-MEGDDTEQGFRG

Query:  GGYSSGGRASFGRGKDRSVGQDECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDERYNGGRYG
        GGY SGG   +  G     G          G   R+    GGG  GG G +SSR      G G  +GG R      R  GG YG
Subjt:  GGYSSGGRASFGRGKDRSVGQDECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDERYNGGRYG

AT3G26420.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain8.0e-3540.86Show/hide
Query:  MASKDEYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKMEG----DDTEQGF
        M+   EYR F+GGL+W  S+R L +AF ++G ++E +++L++ +GR RGFGFITF +++ MD+AI  M+G +L  R I+V+KA+P   G    +D ++G 
Subjt:  MASKDEYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKMEG----DDTEQGF

Query:  RGGGYSSGGRASFGRGKDRSVGQDECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRFDSDGRGDRFGGDRDRY--VDERYNG--GRYGDR-DRFDRRD
          G      R S GR      G  +CFKCG+PGH+AR+CPS     GGGR S S   R+ S  + DR+G   DRY   ++RY     RY  + DR+  +D
Subjt:  RGGGYSSGGRASFGRGKDRSVGQDECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRFDSDGRGDRFGGDRDRY--VDERYNG--GRYGDR-DRFDRRD

Query:  DKYGSRD----RYFDDRYPSAGDRFTGSDRYDVSDRYPQNGYVKDRVYDRDIGPRSG
        D+YGSRD    RY  DR   +G+R  G  R   S   P         YDR   PR+G
Subjt:  DKYGSRD----RYFDDRYPSAGDRFTGSDRYDVSDRYPQNGYVKDRVYDRDIGPRSG

AT5G04280.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain2.5e-8159.27Show/hide
Query:  MASKDEYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKMEGDDTE-QGFRGG
        MA+K+  RIFVGGLS  +++R LE AF RFG +L+ QIMLERDTGR RGFGFITFADRR MD++IREMHG++ G+R+ISVN+AEPK+  DD E  G RGG
Subjt:  MASKDEYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKMEGDDTE-QGFRGG

Query:  ---GYSSGGRASFGRGKDRS--VGQDECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRF--DSDGRGDRFGG-----DRDRYVDERYNG-GRYGDRDR
           GYS  G+ SFG G      VG+DECFKCGR GHWARDCPS GGGRGG  G FSSR+     SDGR DR+       DR+RY+D+RY+G  RYG RDR
Subjt:  ---GYSSGGRASFGRGKDRS--VGQDECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRF--DSDGRGDRFGG-----DRDRYVDERYNG-GRYGDRDR

Query:  FDRRDDKYGSRDRYFDDRYPSAGDRFTGSDRYD-VSDRYPQNGYVKDRVYDRDIGPRSGSDRYG---SGGP---GRHEGRSYRDRTG-PYDRPSRVGRPS
        FD R + Y  RDRY  DRY +  DRF G DRY   SDRYP   Y K R ++RDI P +GSDRYG   +GGP   G  EGR +R R G PY+RPSR G   
Subjt:  FDRRDDKYGSRDRYFDDRYPSAGDRFTGSDRYD-VSDRYPQNGYVKDRVYDRDIGPRSGSDRYG---SGGP---GRHEGRSYRDRTG-PYDRPSRVGRPS

Query:  SY
        +Y
Subjt:  SY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCGAAAGACGAGTATCGAATATTTGTTGGAGGCCTCTCATGGAACATTTCAGAGCGTCAGCTCGAAAACGCTTTCATTCGCTTCGGCAAAATGCTCGAAACTCA
AATCATGTTAGAACGAGATACAGGTCGTCCTCGTGGGTTTGGTTTTATTACCTTTGCAGACCGTAGAGGGATGGATGATGCAATAAGAGAGATGCATGGCCAGGAGCTTG
GTGAGCGGATTATCTCAGTAAATAAGGCTGAACCCAAGATGGAGGGTGATGATACTGAGCAAGGCTTCAGGGGAGGAGGTTATTCATCTGGTGGTAGGGCTAGTTTTGGG
AGAGGAAAAGATAGATCTGTGGGGCAGGATGAATGCTTCAAGTGTGGACGCCCAGGGCATTGGGCACGAGACTGTCCCTCAGTCGGTGGTGGACGTGGTGGAGGTAGAGG
TTCATTTTCTTCACGTTCTCGATTTGATAGTGATGGTCGTGGGGATCGTTTTGGAGGAGATCGTGACCGATATGTGGATGAGCGTTATAATGGAGGGCGATATGGTGATA
GAGATCGTTTTGATCGTAGAGACGACAAGTATGGAAGTCGAGACCGCTACTTCGACGACAGGTACCCATCTGCTGGAGATCGCTTTACTGGTAGTGATAGGTATGATGTC
AGCGATCGTTATCCTCAAAATGGCTACGTCAAAGACCGCGTCTACGATAGGGATATTGGTCCGAGGAGTGGCAGTGATAGGTATGGTAGCGGAGGTCCTGGCCGTCATGA
GGGCAGAAGTTATAGAGATAGGACAGGCCCTTACGATCGCCCAAGCAGGGTGGGACGACCATCTTCCTACGACCACTATTAA
mRNA sequenceShow/hide mRNA sequence
CCTAAAAACCCTCAACCTTTTGGAGTTCACTGCTTCACTGCACGTCACAAAGGAATTTTATCTGATTGATACCCGAAAACTGTAATGGCTTCGAAAGACGAGTATCGAAT
ATTTGTTGGAGGCCTCTCATGGAACATTTCAGAGCGTCAGCTCGAAAACGCTTTCATTCGCTTCGGCAAAATGCTCGAAACTCAAATCATGTTAGAACGAGATACAGGTC
GTCCTCGTGGGTTTGGTTTTATTACCTTTGCAGACCGTAGAGGGATGGATGATGCAATAAGAGAGATGCATGGCCAGGAGCTTGGTGAGCGGATTATCTCAGTAAATAAG
GCTGAACCCAAGATGGAGGGTGATGATACTGAGCAAGGCTTCAGGGGAGGAGGTTATTCATCTGGTGGTAGGGCTAGTTTTGGGAGAGGAAAAGATAGATCTGTGGGGCA
GGATGAATGCTTCAAGTGTGGACGCCCAGGGCATTGGGCACGAGACTGTCCCTCAGTCGGTGGTGGACGTGGTGGAGGTAGAGGTTCATTTTCTTCACGTTCTCGATTTG
ATAGTGATGGTCGTGGGGATCGTTTTGGAGGAGATCGTGACCGATATGTGGATGAGCGTTATAATGGAGGGCGATATGGTGATAGAGATCGTTTTGATCGTAGAGACGAC
AAGTATGGAAGTCGAGACCGCTACTTCGACGACAGGTACCCATCTGCTGGAGATCGCTTTACTGGTAGTGATAGGTATGATGTCAGCGATCGTTATCCTCAAAATGGCTA
CGTCAAAGACCGCGTCTACGATAGGGATATTGGTCCGAGGAGTGGCAGTGATAGGTATGGTAGCGGAGGTCCTGGCCGTCATGAGGGCAGAAGTTATAGAGATAGGACAG
GCCCTTACGATCGCCCAAGCAGGGTGGGACGACCATCTTCCTACGACCACTATTAAAATTCAAATGTACGTATATCAGTAGTTGTTGATTAACAATTGCAAATCATTCTA
TAGCTAGGATATGCACTTGCAATGAATTGGCAGTCTTTATGCAAGCTTTGACCTTCCTTTTGTGGCTTCCAAATCTTCATTGCCTTTGAAAATATTTAGTAATAGAAATT
TTGGATGTTACAACTTACAATATCTAATGTTTGTAGGGAGGTTGTACCCTACCTCCAGCCTCAGATATTTTAGTTCTCAATGTGGTGAATTTCTTGGCTGCCCTTGTTGA
CTTTGTTTTGTTCTTTTCTTAGGAACAACAGACAATTGACCCAACTTTCATTTTCTTGAATCTCTGAATTCATTATTTAAAGATCTTTATCTCTATATGGAA
Protein sequenceShow/hide protein sequence
MASKDEYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKMEGDDTEQGFRGGGYSSGGRASFG
RGKDRSVGQDECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDERYNGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFTGSDRYDV
SDRYPQNGYVKDRVYDRDIGPRSGSDRYGSGGPGRHEGRSYRDRTGPYDRPSRVGRPSSYDHY